The 2.0 version of rSNPBase

Variant report

Variant esv2585962
Chromosome Location chr1:228530139-228530139
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:228508800-228530200 Weak transcription Duodenum Mucosa Duodenum
2 chr1:228510000-228531000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr1:228510000-228554600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr1:228510200-228531200 Weak transcription Hela-S3 cervix
5 chr1:228511400-228552400 Weak transcription Psoas Muscle Psoas
6 chr1:228512400-228532200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:228512800-228531400 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr1:228512800-228532600 Weak transcription Primary hematopoietic stem cells blood
9 chr1:228513400-228531400 Weak transcription Fetal Kidney kidney
10 chr1:228518800-228534200 Weak transcription Right Atrium heart
11 chr1:228519200-228531400 Weak transcription Brain Cingulate Gyrus brain
12 chr1:228520000-228538000 Genic enhancers Skeletal Muscle Male skeletal muscle
13 chr1:228520200-228531800 Strong transcription Thymus Thymus
14 chr1:228520200-228532000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr1:228520200-228532000 Strong transcription Left Ventricle heart
16 chr1:228520200-228538200 Strong transcription Fetal Muscle Leg muscle
17 chr1:228520400-228531400 Strong transcription Right Ventricle heart
18 chr1:228520400-228531600 Strong transcription Fetal Stomach stomach
19 chr1:228520400-228532400 Strong transcription Primary T helper naive cells fromperipheralblood blood
20 chr1:228520400-228535000 Strong transcription Breast Myoepithelial Primary Cells Breast
21 chr1:228520400-228535200 Genic enhancers Skeletal Muscle Female skeletal muscle
22 chr1:228520600-228532000 Strong transcription Fetal Brain Female brain
23 chr1:228522000-228541200 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:228524800-228531600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:228525800-228531200 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr1:228525800-228531400 Weak transcription A549 lung
27 chr1:228527400-228531200 Strong transcription Lung lung
28 chr1:228527400-228531400 Weak transcription HUES64 Cell Line embryonic stem cell
29 chr1:228527400-228531800 Weak transcription H9 Cell Line embryonic stem cell
30 chr1:228527400-228532400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr1:228527400-228532400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr1:228527400-228545800 Weak transcription Fetal Brain Male brain
33 chr1:228527600-228531400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr1:228527600-228531400 Weak transcription HUES6 Cell Line embryonic stem cell
35 chr1:228527600-228531400 Weak transcription Fetal Heart heart
36 chr1:228527600-228538600 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr1:228527600-228546600 Weak transcription iPS-18 Cell Line embryonic stem cell
38 chr1:228527600-228562400 Weak transcription Brain Anterior Caudate brain
39 chr1:228527800-228530800 Weak transcription Esophagus oesophagus
40 chr1:228527800-228532200 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:228527800-228532400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr1:228527800-228555800 Weak transcription Gastric stomach
43 chr1:228528000-228539200 Weak transcription Ovary ovary
44 chr1:228528200-228531400 Weak transcription Fetal Lung lung
45 chr1:228528200-228543400 Weak transcription HSMMtube muscle
46 chr1:228528400-228539000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr1:228528600-228532200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr1:228529000-228534400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr1:228529200-228531000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr1:228529200-228532800 Strong transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015