No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs190535596 |
chr21:47608820-47608821 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs529472955 |
chr21:47608845-47608846 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs147903820 |
chr21:47608849-47608850 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive regionlncRNA
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs56173768 |
chr21:47608877-47608878 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
5 |
rs558397449 |
chr21:47608914-47608915 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs566301215 |
chr21:47608941-47608942 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs576652132 |
chr21:47608949-47608950 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs182306824 |
chr21:47608967-47608968 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs555994002 |
chr21:47608972-47608973 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs374587643 |
chr21:47608996-47608997 |
Enhancers Weak transcription Genic enhancers Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs541088205 |
chr21:47609012-47609013 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs528751084 |
chr21:47609019-47609020 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs573713761 |
chr21:47609061-47609062 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs559393019 |
chr21:47609088-47609089 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs577537211 |
chr21:47609092-47609093 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs544989357 |
chr21:47609145-47609146 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs563634768 |
chr21:47609185-47609186 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs530691412 |
chr21:47609188-47609189 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
7 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs548809051 |
chr21:47609207-47609208 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs187080789 |
chr21:47609241-47609242 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs529353746 |
chr21:47609244-47609245 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs113978064 |
chr21:47609246-47609247 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs115281881 |
chr21:47609258-47609259 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs557821610 |
chr21:47609266-47609267 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs531785388 |
chr21:47609267-47609268 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs143786157 |
chr21:47609329-47609330 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs552115427 |
chr21:47609331-47609332 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs148135994 |
chr21:47609373-47609374 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs570374941 |
chr21:47609374-47609375 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs114226873 |
chr21:47609397-47609398 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs556006445 |
chr21:47609448-47609449 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs79636523 |
chr21:47609476-47609477 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs75720076 |
chr21:47609477-47609478 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs567814928 |
chr21:47609486-47609487 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs141111301 |
chr21:47609495-47609496 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs188347703 |
chr21:47609507-47609508 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs9717 |
chr21:47609510-47609511 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
38 |
rs539110792 |
chr21:47609555-47609556 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs545016425 |
chr21:47609556-47609557 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs118184861 |
chr21:47609578-47609579 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs575532354 |
chr21:47609589-47609590 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs542471287 |
chr21:47609619-47609620 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs560750345 |
chr21:47609654-47609655 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs79527568 |
chr21:47609655-47609656 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs914247 |
chr21:47609677-47609678 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
46 |
rs559827615 |
chr21:47609692-47609693 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs877746 |
chr21:47609731-47609732 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
5 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs551793213 |
chr21:47609814-47609815 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs569910734 |
chr21:47609830-47609831 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs138996335 |
chr21:47609847-47609848 |
Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
6 gene(s)
|
Overlapped CNVs
|
n/a
|