Variant report

Variant	esv2751099
Chromosome Location	chr12:45960118-46043633
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:563)
CpG islands
(count:549)
Chromatin interactive
region (count:47)
LncRNA
region (count:6)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:563 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:45990119-45990197	HepG2	liver:	n/a	n/a
2	ATF2	chr12:45970879-45971443	GM12878	blood:	n/a	n/a
3	ATF2	chr12:45970978-45971390	GM12878	blood:	n/a	n/a
4	BATF	chr12:46024694-46024980	GM12878	blood:	n/a	n/a
5	BATF	chr12:45971783-45972158	GM12878	blood:	n/a	chr12:45971972-45971983
6	BATF	chr12:45971784-45972137	GM12878	blood:	n/a	chr12:45971972-45971983
7	BATF	chr12:46028102-46028325	GM12878	blood:	n/a	n/a
8	BATF	chr12:46024680-46024996	GM12878	blood:	n/a	n/a
9	BATF	chr12:45970947-45971302	GM12878	blood:	n/a	n/a
10	BATF	chr12:46028096-46028393	GM12878	blood:	n/a	n/a
11	BCL11A	chr12:45970942-45971386	GM12878	blood:	n/a	chr12:45971196-45971205
12	BCL11A	chr12:45971795-45972084	GM12878	blood:	n/a	chr12:45971972-45971981 chr12:45971971-45971980
13	BCL3	chr12:46028083-46028380	GM12878	blood:	n/a	chr12:46028257-46028266
14	BCL3	chr12:45977092-45977486	GM12878	blood:	n/a	chr12:45977210-45977219
15	BCLAF1	chr12:45970837-45971420	GM12878	blood:	n/a	chr12:45971196-45971205
16	BCLAF1	chr12:46005990-46006366	GM12878	blood:	n/a	chr12:46006357-46006366
17	BCLAF1	chr12:45970919-45971416	GM12878	blood:	n/a	chr12:45971196-45971205
18	BHLHE40	chr12:45971012-45971377	GM12878	blood:	n/a	n/a
19	CEBPB	chr12:46016048-46016418	ECC-1	luminal epithelium:	n/a	chr12:46016234-46016245 chr12:46016210-46016221
20	CEBPB	chr12:46016050-46016395	HepG2	liver:	n/a	chr12:46016234-46016245 chr12:46016210-46016221
21	CEBPB	chr12:46020802-46021048	K562	blood:	n/a	chr12:46020912-46020923
22	CEBPB	chr12:45998198-45998294	H1-hESC	embryonic stem cell:	n/a	n/a
23	CEBPB	chr12:45999613-45999876	IMR90	lung:	n/a	chr12:45999737-45999748
24	CEBPB	chr12:46020815-46021043	A549	lung:	n/a	chr12:46020912-46020923
25	CEBPB	chr12:45998249-45998391	HepG2	liver:	n/a	chr12:45998310-45998321
26	CEBPB	chr12:46020768-46021121	HepG2	liver:	n/a	chr12:46020912-46020923
27	CEBPB	chr12:45999608-45999912	HepG2	liver:	n/a	chr12:45999737-45999748
28	CEBPB	chr12:45990162-45990668	MCF-7	breast:	n/a	n/a
29	CEBPB	chr12:46007743-46007892	HepG2	liver:	n/a	chr12:46007775-46007788 chr12:46007775-46007786
30	CEBPB	chr12:46016061-46016375	Hela-S3	cervix:	n/a	chr12:46016234-46016245 chr12:46016210-46016221
31	CEBPB	chr12:46016066-46016375	IMR90	lung:	n/a	chr12:46016234-46016245 chr12:46016210-46016221
32	CEBPB	chr12:45998047-45998510	MCF-7	breast:	n/a	chr12:45998310-45998321
33	CEBPB	chr12:46016114-46016326	K562	blood:	n/a	chr12:46016234-46016245 chr12:46016210-46016221
34	CEBPB	chr12:45998348-45998351	K562	blood:	n/a	n/a
35	CEBPB	chr12:45999660-45999840	H1-hESC	embryonic stem cell:	n/a	chr12:45999737-45999748
36	CEBPB	chr12:46009001-46009362	Hela-S3	cervix:	n/a	chr12:46009043-46009056
37	CEBPB	chr12:46008921-46009457	MCF-7	breast:	n/a	chr12:46009043-46009056
38	CEBPB	chr12:45998189-45998529	MCF-7	breast:	n/a	chr12:45998310-45998321
39	CEBPB	chr12:46016111-46016356	A549	lung:	n/a	chr12:46016234-46016245 chr12:46016210-46016221
40	CEBPB	chr12:45977106-45977436	IMR90	lung:	n/a	n/a
41	CEBPB	chr12:46020853-46021032	IMR90	lung:	n/a	chr12:46020912-46020923
42	CEBPB	chr12:46020807-46021095	Hela-S3	cervix:	n/a	chr12:46020912-46020923
43	CEBPB	chr12:46031455-46031840	IMR90	lung:	n/a	n/a
44	CHD1	chr12:45969717-45969736	GM12878	blood:	n/a	n/a
45	CHD2	chr12:46009136-46009483	Hela-S3	cervix:	n/a	n/a
46	CHD2	chr12:45984254-45984277	Hela-S3	cervix:	n/a	n/a
47	CTCF	chr12:46001880-46002030	A549	lung:	n/a	chr12:46001962-46001980
48	CTCF	chr12:45982074-45982149	Gliobla	brain:	n/a	n/a
49	CTCF	chr12:46001880-46002030	HPAF	blood vessel:	n/a	chr12:46001962-46001980
50	CTCF	chr12:46001880-46002030	HPF	lung:	n/a	chr12:46001962-46001980

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:46009735-46009785	Caco-2	colon:	n/a
2	chr12:45979553-45979603	HPAEpiC	pulmonary alveolar:	n/a
3	chr12:45970082-45970132	HepG2	liver:	n/a
4	chr12:45979492-45979542	AG09319	gingival:	n/a
5	chr12:46005115-46005165	Hela-S3	cervix:	n/a
6	chr12:45979553-45979603	HCT-116	colon:	n/a
7	chr12:46005115-46005165	HPAEpiC	pulmonary alveolar:	n/a
8	chr12:45979492-45979542	PANC-1	pancreas:	n/a
9	chr12:46005115-46005165	HRCEpiC	kidney:	n/a
10	chr12:45979627-45979677	SKMC	muscle:	n/a
11	chr12:45970082-45970132	AoSMC	blood vessel:	n/a
12	chr12:46005115-46005165	AG04449	skin:	fetal
13	chr12:45980407-45980457	HCF	heart:	n/a
14	chr12:46006298-46006348	HIPEpiC	eye:	n/a
15	chr12:46005115-46005165	IMR90	lung:	fetal
16	chr12:45979553-45979603	CMK	blood:	n/a
17	chr12:46009735-46009785	NB4	blood:	n/a
18	chr12:45970082-45970132	HL-60	blood:	n/a
19	chr12:46006298-46006348	ECC-1	luminal epithelium:	n/a
20	chr12:45979553-45979603	HEEpiC	esophagus:	n/a
21	chr12:46005007-46005057	AG10803	skin:	n/a
22	chr12:45979492-45979542	HRCEpiC	kidney:	n/a
23	chr12:46005115-46005165	AG10803	skin:	n/a
24	chr12:46005115-46005165	T-47D	breast:	n/a
25	chr12:46005007-46005057	GM19239	blood:	n/a
26	chr12:45979627-45979677	BE2_C	brain:	n/a
27	chr12:46006298-46006348	Hepatocyte	liver:	n/a
28	chr12:45980407-45980457	AG09319	gingival:	n/a
29	chr12:46005115-46005165	AG09309	skin:	n/a
30	chr12:46006298-46006348	HCT-116	colon:	n/a
31	chr12:45970082-45970132	SK-N-MC	brain:	n/a
32	chr12:46009735-46009785	MCF10A-Er-Src	breast:	n/a
33	chr12:46009735-46009785	AG09319	gingival:	n/a
34	chr12:45979553-45979603	AG04449	skin:	fetal
35	chr12:45980407-45980457	H1-hESC	embryonic stem cell:	embryo
36	chr12:46006298-46006348	HCM	heart:	n/a
37	chr12:45979492-45979542	HCM	heart:	n/a
38	chr12:45980407-45980457	Caco-2	colon:	n/a
39	chr12:46005007-46005057	NB4	blood:	n/a
40	chr12:45979627-45979677	NHDF-neo	bronchial:	n/a
41	chr12:46005115-46005165	BE2_C	brain:	n/a
42	chr12:46005115-46005165	MCF-7	breast:	n/a
43	chr12:45979553-45979603	SAEC	small airway:	n/a
44	chr12:45979492-45979542	SK-N-SH_RA	brain:	n/a
45	chr12:46005007-46005057	BJ	skin:	n/a
46	chr12:46005007-46005057	ProgFib	skin:	n/a
47	chr12:46005007-46005057	SK-N-SH_RA	brain:	n/a
48	chr12:45979553-45979603	HRCEpiC	kidney:	n/a
49	chr12:46005115-46005165	HL-60	blood:	n/a
50	chr12:46005115-46005165	LNCaP	prostate:	n/a

(count:47 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:46027047..46029580-chr12:46120603..46122990,2	MCF-7	breast:
2	chr12:45989699..45991915-chr12:46007034..46009721,2	MCF-7	breast:
3	chr12:46011580..46014039-chr12:46017098..46019147,2	MCF-7	breast:
4	chr12:46000607..46002372-chr12:46007311..46008913,2	MCF-7	breast:
5	chr12:45960398..45962894-chr12:45964969..45966923,2	MCF-7	breast:
6	chr12:45982849..45985395-chr12:46114233..46117039,2	K562	blood:
7	chr12:45960911..45963616-chr12:45966656..45968375,2	K562	blood:
8	chr12:45980640..45983256-chr12:45983851..45986122,2	MCF-7	breast:
9	chr12:45981654..45982562-chr12:46119343..46119972,2	MCF-7	breast:
10	chr12:46032282..46036575-chr12:46037018..46040908,3	K562	blood:
11	chr12:45967501..45969113-chr12:45973919..45976866,2	K562	blood:
12	chr12:46003941..46007614-chr12:46011216..46015069,3	K562	blood:
13	chr12:45960398..45962894-chr12:45964969..45966923,2	MCF-7	breast:
14	chr12:45975529..45978166-chr12:46122710..46125350,3	MCF-7	breast:
15	chr12:45989699..45991915-chr12:46007034..46009721,2	MCF-7	breast:
16	chr12:45960911..45963616-chr12:45966656..45968375,2	K562	blood:
17	chr12:45999032..46001956-chr12:46122840..46124426,2	MCF-7	breast:
18	chr12:45977173..45979190-chr12:46121054..46122970,2	K562	blood:
19	chr12:45985940..45987735-chr12:46117365..46119366,2	MCF-7	breast:
20	chr12:45988237..45989135-chr15:35989632..35990324,2	MCF-7	breast:
21	chr12:45960103..45961622-chr12:46119722..46121223,2	MCF-7	breast:
22	chr12:45980640..45983256-chr12:45983851..45986122,2	MCF-7	breast:
23	chr12:45988921..45992077-chr12:45999676..46001428,3	MCF-7	breast:
24	chr12:45977972..45998616-chr12:46118204..46125859,52	MCF-7	breast:
25	chr12:46032282..46036575-chr12:46037018..46040908,3	K562	blood:
26	chr12:46000607..46002372-chr12:46007311..46008913,2	MCF-7	breast:
27	chr12:45989452..45992000-chr17:56735130..56737683,2	MCF-7	breast:
28	chr12:46014914..46017037-chr12:46380285..46382180,2	MCF-7	breast:
29	chr12:46011580..46014039-chr12:46017098..46019147,2	MCF-7	breast:
30	chr12:45984483..45987367-chr12:45987935..45990423,2	MCF-7	breast:
31	chr12:45986194..45990672-chr12:46119432..46124502,8	MCF-7	breast:
32	chr12:46027660..46029671-chr12:46119807..46122431,2	K562	blood:
33	chr12:46029494..46033285-chr12:46120946..46122997,4	MCF-7	breast:
34	chr12:45984483..45987367-chr12:45987935..45990423,2	MCF-7	breast:
35	chr12:46043093..46045712-chr12:46047374..46050073,2	K562	blood:
36	chr12:46009974..46011818-chr12:46122972..46124815,2	K562	blood:
37	chr12:46023354..46026257-chr12:46026913..46028524,2	K562	blood:
38	chr12:45974620..45976880-chr12:45981422..45983264,2	MCF-7	breast:
39	chr12:45988921..45992077-chr12:45999676..46001428,3	MCF-7	breast:
40	chr12:45967501..45969113-chr12:45973919..45976866,2	K562	blood:
41	chr12:45979012..45981582-chr12:46120847..46123181,4	MCF-7	breast:
42	chr12:46040105..46041925-chr12:46121301..46123514,2	MCF-7	breast:
43	chr12:45647735..45650702-chr12:45991253..45994060,2	K562	blood:
44	chr12:46023354..46026257-chr12:46026913..46028524,2	K562	blood:
45	chr12:45964811..45966757-chr12:46118929..46122565,3	MCF-7	breast:
46	chr12:45974620..45976880-chr12:45981422..45983264,2	MCF-7	breast:
47	chr12:45997654..45999944-chr12:46107305..46109370,2	MCF-7	breast:

(count:6 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SCAF11-1	chr12:45994447-45994567	ENSG00000257657.1
2	lnc-SCAF11-1	chr12:45993925-45994567	ENSG00000257657.1
3	lnc-SCAF11-1	chr12:46004322-46004371	ENSG00000257657.1
4	lnc-SCAF11-1	chr12:46004322-46004403	ENSG00000257657.1
5	lnc-SCAF11-1	chr12:46004322-46004373	ENSG00000257657.2
6	lnc-SCAF11-1	chr12:45994447-45994567	ENSG00000257657.2

No data

Variant related genes	Relation type
ENSG00000257657	TF binding region
ENSG00000257657	CpG island
ENSG00000257657	chromatin interactions
ENSG00000273015	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000189079	chromatin interactions

Extended variants
information (count: 2905 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:2905 , 50 per page) page: 1 2 3 4 5 6 7 ... 59

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10748428	chr12:45960118-45960119	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs532229787	chr12:45960133-45960134	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs550608947	chr12:45960134-45960135	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs146193017	chr12:45960199-45960200	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs537741994	chr12:45960208-45960209	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs535146381	chr12:45960219-45960220	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs567940354	chr12:45960235-45960236	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs547379656	chr12:45960281-45960282	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs139380206	chr12:45960282-45960283	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs577752092	chr12:45960310-45960311	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs191264764	chr12:45960332-45960333	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs556958508	chr12:45960366-45960367	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs575194554	chr12:45960471-45960472	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs35422703	chr12:45960475-45960476	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs376620244	chr12:45960522-45960523	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs77534922	chr12:45960523-45960524	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs561074724	chr12:45960528-45960529	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs374002828	chr12:45960600-45960601	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs144151732	chr12:45960620-45960621	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs79357118	chr12:45960650-45960651	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs367619761	chr12:45960691-45960692	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs148258793	chr12:45960700-45960701	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs182310096	chr12:45960716-45960717	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs532264633	chr12:45960717-45960718	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs61654777	chr12:45960722-45960723	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs562475493	chr12:45960785-45960786	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs146474309	chr12:45960787-45960788	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs548167515	chr12:45960812-45960813	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs567895204	chr12:45960815-45960816	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs535314793	chr12:45960828-45960829	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs78919172	chr12:45960851-45960852	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs140823256	chr12:45960862-45960863	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs115474615	chr12:45960904-45960905	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs572220793	chr12:45960927-45960928	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs575330235	chr12:45960982-45960983	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs536277854	chr12:45960995-45960996	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs554931898	chr12:45961043-45961044	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs117766550	chr12:45961132-45961133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs540489763	chr12:45961145-45961146	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs186974270	chr12:45961147-45961148	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs577069377	chr12:45961156-45961157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs73289045	chr12:45961298-45961299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs76651692	chr12:45961342-45961343	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs144962307	chr12:45961367-45961368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs531605674	chr12:45961409-45961410	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs543677619	chr12:45961459-45961460	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs192897233	chr12:45961498-45961499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs75426129	chr12:45961516-45961517	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs148963314	chr12:45961538-45961539	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs560063399	chr12:45961551-45961552	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Seminomas	18059402	CNVD
Wilms tumour	21544195	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Ewing''s sarcoma	21437220	CNVD
Testicular germ cell tumor	18059402	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Basal cell lymphoma	17053054	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Neurodevelopmental disorder	22521361	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	21949216	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21637783	CNVD
Glioblastoma multiforme	21080181	CNVD
Renal cell carcinoma	19461508	CNVD
Burkitt''s lymphoma	18698080	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Hirschsprung''s Disease	21712996	CNVD
Lissencephaly	21572526	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Breast cancer	19602461	CNVD
Breast cancer	17899364	CNVD
Colorectal cancer	16272173	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Adenoid cystic carcinoma	18332873	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	18632612	CNVD
Gastric cancer	18160780	CNVD
Myelofibrosis	22110671	CNVD
Follicular lymphoma	20505157	CNVD
Hepatocellular carcinoma	16750200	CNVD
Melanoma	18172304	CNVD
Metanephric adenoma	20802469	CNVD
Glioblastoma multiforme	17387387	CNVD
liposarcomas	17372913	CNVD
Non-small cell lung cancer	24170126	CNVD
Cancer	16751803	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Bladder cancer	21909424	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:556 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:45959200-45960800	Enhancers	Stomach Mucosa	stomach
2	chr12:45959600-45966400	Weak transcription	Duodenum Mucosa	Duodenum
3	chr12:45960000-45960400	Enhancers	Esophagus	oesophagus
4	chr12:45960200-45961000	Enhancers	Fetal Kidney	kidney
5	chr12:45960400-45960800	Weak transcription	Esophagus	oesophagus
6	chr12:45960800-45961000	Enhancers	Esophagus	oesophagus
7	chr12:45960800-45965200	Weak transcription	Stomach Mucosa	stomach
8	chr12:45961000-45964200	Weak transcription	Esophagus	oesophagus
9	chr12:45961400-45962000	Weak transcription	Fetal Kidney	kidney
10	chr12:45961600-45964200	Enhancers	Dnd41	blood
11	chr12:45961800-45962000	Bivalent Enhancer	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr12:45962000-45962200	Enhancers	Fetal Kidney	kidney
13	chr12:45962000-45962600	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr12:45962000-45962600	Enhancers	Skeletal Muscle Female	skeletal muscle
15	chr12:45962200-45962600	Enhancers	Primary hematopoietic stem cells	blood
16	chr12:45962200-45963200	Weak transcription	Fetal Kidney	kidney
17	chr12:45962200-45963600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
18	chr12:45962200-45963600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr12:45962200-45963800	Enhancers	Primary hematopoietic stem cells short term culture	blood
20	chr12:45962400-45962800	Enhancers	Fetal Thymus	thymus
21	chr12:45962600-45963600	Weak transcription	Skeletal Muscle Female	skeletal muscle
22	chr12:45962600-45968000	Weak transcription	Primary hematopoietic stem cells	blood
23	chr12:45963200-45963400	Enhancers	Fetal Kidney	kidney
24	chr12:45963600-45963800	Enhancers	Skeletal Muscle Female	skeletal muscle
25	chr12:45963600-45969200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr12:45963600-45969400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr12:45963800-45967800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
28	chr12:45964200-45964600	Enhancers	Esophagus	oesophagus
29	chr12:45965200-45966800	Enhancers	Rectal Mucosa Donor 29	rectum
30	chr12:45965200-45967400	Enhancers	Stomach Mucosa	stomach
31	chr12:45965400-45967000	Enhancers	Rectal Mucosa Donor 31	rectum
32	chr12:45965800-45967000	Enhancers	Sigmoid Colon	Sigmoid Colon
33	chr12:45966400-45967400	Enhancers	Duodenum Mucosa	Duodenum
34	chr12:45966800-45975400	Weak transcription	Rectal Mucosa Donor 29	rectum
35	chr12:45967000-45976400	Weak transcription	Rectal Mucosa Donor 31	rectum
36	chr12:45967400-45967800	Weak transcription	Duodenum Mucosa	Duodenum
37	chr12:45967400-45968400	Weak transcription	Stomach Mucosa	stomach
38	chr12:45967800-45969800	Enhancers	Duodenum Mucosa	Duodenum
39	chr12:45967800-45971600	Enhancers	Primary hematopoietic stem cells short term culture	blood
40	chr12:45968000-45969600	Enhancers	Primary B cells from cord blood	blood
41	chr12:45968000-45971000	Enhancers	Primary hematopoietic stem cells	blood
42	chr12:45968400-45968800	Enhancers	Stomach Mucosa	stomach
43	chr12:45968400-45972000	Enhancers	Primary B cells from peripheral blood	blood
44	chr12:45968600-45969800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
45	chr12:45968800-45970800	Weak transcription	Stomach Mucosa	stomach
46	chr12:45969200-45969600	Enhancers	Monocytes-CD14+_RO01746	blood
47	chr12:45969200-45970400	Enhancers	Brain Hippocampus Middle	brain
48	chr12:45969200-45970600	Enhancers	Fetal Thymus	thymus
49	chr12:45969200-45971000	Enhancers	GM12878-XiMat	blood
50	chr12:45969200-45971200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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