Variant report

Variant	esv275138
Chromosome Location	chr16:74647795-74722907
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1804)
CpG islands
(count:1221)
Chromatin interactive
region (count:88)
LncRNA
region (count:5)
Mature miRNA
region (count: 0)
miRNA target
sites (count:7)

(count:1804 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr16:74713997-74714226	HepG2	liver:	n/a	n/a
2	ARID3A	chr16:74703441-74703480	K562	blood:	n/a	n/a
3	ARID3A	chr16:74669250-74669680	HepG2	liver:	n/a	chr16:74669567-74669583
4	ARID3A	chr16:74657159-74657479	HepG2	liver:	n/a	n/a
5	ARID3A	chr16:74684898-74685117	HepG2	liver:	n/a	n/a
6	ARID3A	chr16:74700585-74701264	HepG2	liver:	n/a	n/a
7	ARID3A	chr16:74700422-74701572	K562	blood:	n/a	n/a
8	ATF1	chr16:74700681-74701223	K562	blood:	n/a	n/a
9	ATF1	chr16:74710337-74710439	K562	blood:	n/a	n/a
10	ATF1	chr16:74657151-74657659	K562	blood:	n/a	n/a
11	ATF2	chr16:74700475-74700904	H1-hESC	embryonic stem cell:	n/a	n/a
12	ATF2	chr16:74700539-74701254	GM12878	blood:	n/a	n/a
13	ATF2	chr16:74700600-74701132	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr16:74660593-74661268	GM12878	blood:	n/a	n/a
15	ATF2	chr16:74700530-74701155	GM12878	blood:	n/a	n/a
16	BACH1	chr16:74655377-74655498	K562	blood:	n/a	n/a
17	BACH1	chr16:74683681-74683684	K562	blood:	n/a	n/a
18	BACH1	chr16:74702003-74702216	K562	blood:	n/a	n/a
19	BATF	chr16:74660681-74661035	GM12878	blood:	n/a	n/a
20	BATF	chr16:74660726-74661175	GM12878	blood:	n/a	n/a
21	BATF	chr16:74706411-74706648	GM12878	blood:	n/a	chr16:74706518-74706527
22	BCL11A	chr16:74660693-74660987	GM12878	blood:	n/a	n/a
23	BCL3	chr16:74700400-74701196	A549	lung:	n/a	chr16:74700696-74700709 chr16:74700519-74700528 chr16:74700775-74700784
24	BCL3	chr16:74664578-74664859	GM12878	blood:	n/a	n/a
25	BCL3	chr16:74700429-74701003	A549	lung:	n/a	chr16:74700696-74700709 chr16:74700519-74700528 chr16:74700775-74700784
26	BCLAF1	chr16:74700554-74701319	GM12878	blood:	n/a	chr16:74700696-74700709 chr16:74700775-74700784
27	BHLHE40	chr16:74697409-74697495	K562	blood:	n/a	n/a
28	BHLHE40	chr16:74701489-74701627	K562	blood:	n/a	n/a
29	BHLHE40	chr16:74700573-74701227	K562	blood:	n/a	n/a
30	BHLHE40	chr16:74700349-74701267	HepG2	liver:	n/a	chr16:74700396-74700412
31	BHLHE40	chr16:74700516-74701291	GM12878	blood:	n/a	n/a
32	BHLHE40	chr16:74660608-74661191	GM12878	blood:	n/a	n/a
33	BHLHE40	chr16:74714080-74714118	HepG2	liver:	n/a	n/a
34	BHLHE40	chr16:74673210-74673488	HepG2	liver:	n/a	n/a
35	BRCA1	chr16:74700733-74701630	H1-hESC	embryonic stem cell:	n/a	n/a
36	BRCA1	chr16:74700537-74700988	HepG2	liver:	n/a	n/a
37	BRCA1	chr16:74700155-74701529	Hela-S3	cervix:	n/a	n/a
38	CBX3	chr16:74700462-74701290	K562	blood:	n/a	n/a
39	CCNT2	chr16:74700245-74700979	K562	blood:	n/a	n/a
40	CCNT2	chr16:74701290-74701639	K562	blood:	n/a	n/a
41	CEBPB	chr16:74700695-74700840	H1-hESC	embryonic stem cell:	n/a	n/a
42	CEBPB	chr16:74700163-74701695	Hela-S3	cervix:	n/a	chr16:74700908-74700916
43	CEBPB	chr16:74666572-74666918	MCF-7	breast:	n/a	n/a
44	CEBPB	chr16:74673078-74673505	Hela-S3	cervix:	n/a	n/a
45	CEBPB	chr16:74675974-74676171	Hela-S3	cervix:	n/a	chr16:74676076-74676087
46	CEBPB	chr16:74672610-74672875	HepG2	liver:	n/a	n/a
47	CEBPB	chr16:74673077-74673569	HepG2	liver:	n/a	n/a
48	CEBPB	chr16:74676011-74676109	HepG2	liver:	n/a	chr16:74676076-74676087
49	CEBPB	chr16:74673035-74673528	A549	lung:	n/a	n/a
50	CEBPB	chr16:74673114-74673425	HepG2	liver:	n/a	n/a

(count:1221 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr16:74657147-74657197	HCM	heart:	n/a
2	chr16:74657147-74657197	HCM	heart:	n/a
3	chr16:74700334-74700384	HCF	heart:	n/a
4	chr16:74657147-74657197	HEEpiC	esophagus:	n/a
5	chr16:74700730-74700780	Caco-2	colon:	n/a
6	chr16:74716561-74716611	SK-N-SH	brain:	n/a
7	chr16:74697572-74697622	AG09319	gingival:	n/a
8	chr16:74700924-74700974	PrEC	prostate:	n/a
9	chr16:74661825-74661875	ECC-1	luminal epithelium:	n/a
10	chr16:74716561-74716611	NHBE	bronchial:	n/a
11	chr16:74657147-74657197	H1-hESC	embryonic stem cell:	embryo
12	chr16:74700811-74700861	T-47D	breast:	n/a
13	chr16:74701487-74701537	BJ	skin:	n/a
14	chr16:74648429-74648479	AoSMC	blood vessel:	n/a
15	chr16:74701830-74701880	GM19239	blood:	n/a
16	chr16:74657147-74657197	HPAEpiC	pulmonary alveolar:	n/a
17	chr16:74700808-74700858	SK-N-SH	brain:	n/a
18	chr16:74700937-74700987	HEK293	kidney:	embryo
19	chr16:74700730-74700780	Jurkat	blood:	n/a
20	chr16:74700943-74700993	AG09319	gingival:	n/a
21	chr16:74706258-74706308	SK-N-SH	brain:	n/a
22	chr16:74701830-74701880	Hepatocyte	liver:	n/a
23	chr16:74700808-74700858	HEK293	kidney:	embryo
24	chr16:74700937-74700987	HCPEpiC	choroid plexus:	n/a
25	chr16:74648429-74648479	AG10803	skin:	n/a
26	chr16:74700334-74700384	A549	lung:	n/a
27	chr16:74700787-74700837	HCM	heart:	n/a
28	chr16:74716561-74716611	MCF10A-Er-Src	breast:	n/a
29	chr16:74700334-74700384	HCM	heart:	n/a
30	chr16:74701421-74701471	SAEC	small airway:	n/a
31	chr16:74648429-74648479	HUVEC	blood vessel:	n/a
32	chr16:74700924-74700974	PANC-1	pancreas:	n/a
33	chr16:74700937-74700987	NT2-D1	testis:	n/a
34	chr16:74697572-74697622	RPTEC	kidney:	n/a
35	chr16:74648429-74648479	HL-60	blood:	n/a
36	chr16:74657147-74657197	AG04449	skin:	fetal
37	chr16:74700937-74700987	AG04449	skin:	fetal
38	chr16:74700787-74700837	Caco-2	colon:	n/a
39	chr16:74700334-74700384	Jurkat	blood:	n/a
40	chr16:74648429-74648479	GM12878	blood:	n/a
41	chr16:74701830-74701880	T-47D	breast:	n/a
42	chr16:74698571-74698621	HPAEpiC	pulmonary alveolar:	n/a
43	chr16:74701421-74701471	HCF	heart:	n/a
44	chr16:74697572-74697622	SK-N-SH_RA	brain:	n/a
45	chr16:74657147-74657197	ECC-1	luminal epithelium:	n/a
46	chr16:74700730-74700780	GM12891	blood:	n/a
47	chr16:74700943-74700993	AoSMC	blood vessel:	n/a
48	chr16:74701830-74701880	A549	lung:	n/a
49	chr16:74701487-74701537	GM12891	blood:	n/a
50	chr16:74716561-74716611	HCPEpiC	choroid plexus:	n/a

(count:88 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr16:74343741..74344475-chr16:74657118..74657649,2	MCF-7	breast:
2	chr16:74674399..74676570-chr16:74676599..74678795,2	MCF-7	breast:
3	chr16:74650514..74653856-chr16:74682204..74686056,4	K562	blood:
4	chr16:74639752..74642049-chr16:74684258..74686638,2	MCF-7	breast:
5	chr16:74705804..74707592-chr16:74710539..74712137,2	K562	blood:
6	chr16:74337515..74340447-chr16:74662738..74665058,2	MCF-7	breast:
7	chr16:74679071..74680633-chr16:74691530..74693953,2	K562	blood:
8	chr16:74690546..74692876-chr16:74698874..74700526,3	MCF-7	breast:
9	chr16:74705992..74708516-chr16:74714300..74716773,2	K562	blood:
10	chr16:74678553..74682097-chr16:74683465..74687363,5	K562	blood:
11	chr16:74700450..74705009-chr16:74710570..74714672,7	MCF-7	breast:
12	chr16:74639447..74641128-chr16:74650716..74652474,2	MCF-7	breast:
13	chr16:74699432..74702199-chr16:74708943..74711933,3	MCF-7	breast:
14	chr16:74639290..74641061-chr16:74667477..74670443,2	MCF-7	breast:
15	chr16:74696660..74698219-chr16:74749550..74751165,2	K562	blood:
16	chr16:74703915..74707492-chr16:74713213..74716773,3	K562	blood:
17	chr16:74639257..74644662-chr16:74649340..74660012,16	MCF-7	breast:
18	chr16:74704952..74706535-chr16:74707998..74709944,2	K562	blood:
19	chr16:74638992..74641071-chr16:74646319..74648284,3	MCF-7	breast:
20	chr16:74700257..74700957-chr2:86668009..86668562,2	Hela-S3	cervix:
21	chr16:74703864..74706477-chr16:74725024..74727864,2	MCF-7	breast:
22	chr16:74721615..74724143-chr16:74726578..74728139,2	K562	blood:
23	chr16:74660477..74662729-chr16:74664417..74666461,2	K562	blood:
24	chr16:74649316..74653490-chr16:74654574..74658436,6	MCF-7	breast:
25	chr16:74683261..74687740-chr16:74698913..74703582,5	MCF-7	breast:
26	chr16:74640174..74643079-chr16:74652030..74653630,2	K562	blood:
27	chr16:74703915..74707492-chr16:74713213..74716773,3	K562	blood:
28	chr16:74707943..74709694-chr16:74719830..74722064,2	MCF-7	breast:
29	chr16:74656680..74657190-chr16:74684447..74684995,2	MCF-7	breast:
30	chr16:74698718..74701799-chr16:74732753..74735845,3	MCF-7	breast:
31	chr16:74707943..74709694-chr16:74719830..74722064,2	MCF-7	breast:
32	chr16:74332920..74334638-chr16:74693142..74695153,2	K562	blood:
33	chr16:74691160..74693410-chr16:74694917..74697832,4	MCF-7	breast:
34	chr16:74693044..74695138-chr16:74699760..74701961,4	MCF-7	breast:
35	chr16:74670499..74672988-chr16:74678838..74682145,3	K562	blood:
36	chr16:74330188..74332288-chr16:74655953..74658208,2	MCF-7	breast:
37	chr16:74699570..74701195-chr16:74718354..74721025,2	K562	blood:
38	chr16:70185026..70185664-chr16:74657267..74657783,2	MCF-7	breast:
39	chr16:74679071..74680633-chr16:74691530..74693953,2	K562	blood:
40	chr16:74696101..74698353-chr16:74734070..74735926,3	MCF-7	breast:
41	chr16:74664108..74666589-chr16:74676554..74678966,2	K562	blood:
42	chr16:74707550..74709175-chr16:74718334..74720199,2	K562	blood:
43	chr16:74683458..74685370-chr16:74686196..74687770,2	K562	blood:
44	chr16:74343323..74344029-chr16:74656867..74657812,2	MCF-7	breast:
45	chr16:74708894..74711247-chr16:74711417..74714110,3	K562	blood:
46	chr16:74700318..74701202-chr2:110873506..110874030,2	HCT-116	colon:
47	chr16:74649316..74653490-chr16:74654574..74658436,6	MCF-7	breast:
48	chr16:74656680..74657190-chr16:74684447..74684995,2	MCF-7	breast:
49	chr16:74657630..74659377-chr16:74696166..74698749,2	K562	blood:
50	chr16:74606439..74608436-chr16:74656696..74658823,2	K562	blood:

(count:5 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MLKL-3	chr16:74698233-74698643	NONHSAT143699
2	lnc-MLKL-3	chr16:74700684-74700730	NONHSAT143699
3	lnc-MLKL-1	chr16:74708858-74708998	NONHSAT143701
4	lnc-MLKL-1	chr16:74705755-74706436	NONHSAT143701
5	lnc-MLKL-1	chr16:74709253-74712311	NONHSAT143701

No data

(count:7 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	RFWD3	hsa-miR-124-3p	chr16:74656414-74656433
2	RFWD3	hsa-miR-340-5p	chr16:74656778-74656802
3	RFWD3	hsa-let-7c-5p	chr16:74655472-74655497
4	RFWD3	hsa-miR-215-5p	chr16:74656958-74656978
5	RFWD3	hsa-miR-192-5p	chr16:74656958-74656978
6	RFWD3	hsa-miR-215-5p	chr16:74657672-74657692
7	RFWD3	hsa-miR-192-5p	chr16:74657672-74657692

Variant related genes	Relation type
MLKL	TF binding region
ENSG00000262904	TF binding region
HSPE1P7	TF binding region
RFWD3	TF binding region
MLKL	CpG island
ENSG00000262904	CpG island
HSPE1P7	CpG island
RFWD3	CpG island
ENSG00000262904	chromatin interactions
ENSG00000144063	chromatin interactions
ENSG00000115548	chromatin interactions
ENSG00000259972	chromatin interactions
ENSG00000168404	chromatin interactions
ENSG00000168411	chromatin interactions
ENSG00000103035	chromatin interactions
ENSG00000261404	chromatin interactions
ENSG00000184260	chromatin interactions
ENSG00000103089	chromatin interactions
ENSG00000090863	chromatin interactions

Extended variants
information (count: 3714 )
Associated
traits (count: 69 )

Variant overlapped rSNPs/rCNVs (count:3714 , 50 per page) page: 1 2 3 4 5 6 7 ... 75

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4887779	chr16:74647795-74647796	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs74577242	chr16:74647796-74647797	Weak transcription Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs553903857	chr16:74647822-74647823	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs577132103	chr16:74647831-74647832	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs546469541	chr16:74647901-74647902	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs373897515	chr16:74647943-74647944	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs564776389	chr16:74647945-74647946	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs545317328	chr16:74647991-74647992	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs544011272	chr16:74647997-74647998	Weak transcription Strong transcription Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs560981629	chr16:74648009-74648010	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs532689541	chr16:74648023-74648024	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs552871506	chr16:74648032-74648033	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs529785028	chr16:74648033-74648034	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs558842616	chr16:74648034-74648035	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs546819397	chr16:74648044-74648045	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs143607566	chr16:74648050-74648051	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs532344761	chr16:74648072-74648073	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs376251359	chr16:74648085-74648086	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs60191079	chr16:74648099-74648100	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs61106591	chr16:74648102-74648103	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs61222879	chr16:74648116-74648117	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs61549208	chr16:74648128-74648129	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs11149758	chr16:74648157-74648158	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
24	rs538220824	chr16:74648160-74648161	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs59970472	chr16:74648162-74648163	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs112217730	chr16:74648164-74648165	Weak transcription Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs57102331	chr16:74648170-74648171	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs58116287	chr16:74648171-74648172	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs58410296	chr16:74648179-74648180	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs548152717	chr16:74648183-74648184	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs199850283	chr16:74648255-74648256	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs568219400	chr16:74648261-74648262	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs36097721	chr16:74648267-74648268	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	mRNA abundance
34	rs536780270	chr16:74648268-74648269	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs553988309	chr16:74648334-74648335	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs561285595	chr16:74648353-74648354	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs114626787	chr16:74648432-74648433	Weak transcription Strong transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
38	rs573177244	chr16:74648434-74648435	Weak transcription Strong transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
39	rs148021700	chr16:74648443-74648444	Weak transcription Strong transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
40	rs183624597	chr16:74648447-74648448	Weak transcription Strong transcription	CpG island	1 gene(s)	Overlapped CNVs	n/a
41	rs544246215	chr16:74648514-74648515	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs560818869	chr16:74648518-74648519	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs574594005	chr16:74648566-74648567	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs540321531	chr16:74648598-74648599	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs374713558	chr16:74648611-74648612	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs532310210	chr16:74648662-74648663	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs552220416	chr16:74648688-74648689	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs188328075	chr16:74648744-74648745	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs531460548	chr16:74648762-74648763	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs548188694	chr16:74648775-74648776	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:69)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Schizophrenia	22958593	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	17850661	CNVD
Breast cancer	16702952	CNVD
Medulloblastoma	16968546	CNVD
Prostate cancer	19242612	CNVD
Cancer	22429812	CNVD
Ewing''s sarcoma	21437220	CNVD
Ewing''s sarcoma	22429812	CNVD
Melanoma	18172304	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Multiple myeloma	21628407	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	17001317	CNVD
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	17603634	CNVD
Prostate cancer	16573809	CNVD
Prostate cancer	17245344	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21806811	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	21509527	CNVD
Melanoma	22183965	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Poland''s syndrome	22110015	CNVD
Neuroblastoma	21899760	CNVD
Liver carcinoma	19366792	CNVD
Prostate cancer	21965145	CNVD
Cancer	21183584	CNVD
Ovarian cancer	20844748	CNVD
Lung cancer	18438408	CNVD
Prostate cancer	19156837	CNVD
Acute myeloid leukemia	17377590	CNVD
Breast cancer	20409316	CNVD
Hepatocellular carcinoma	16750200	CNVD
Epilepsy	20502679	CNVD

Chromatin state (count:2408 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:74641200-74653800	Weak transcription	Spleen	Spleen
2	chr16:74641400-74655800	Weak transcription	Sigmoid Colon	Sigmoid Colon
3	chr16:74641400-74656000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr16:74641600-74651000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr16:74641600-74656000	Weak transcription	Aorta	Aorta
6	chr16:74641600-74657000	Weak transcription	Gastric	stomach
7	chr16:74641600-74657800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr16:74641800-74653600	Weak transcription	GM12878-XiMat	blood
9	chr16:74641800-74654600	Weak transcription	Primary B cells from peripheral blood	blood
10	chr16:74641800-74655200	Weak transcription	Primary B cells from cord blood	blood
11	chr16:74641800-74655400	Weak transcription	Duodenum Smooth Muscle	Duodenum
12	chr16:74641800-74655400	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr16:74641800-74655800	Weak transcription	NHEK	skin
14	chr16:74641800-74656200	Weak transcription	HUVEC	blood vessel
15	chr16:74641800-74656600	Weak transcription	Brain Cingulate Gyrus	brain
16	chr16:74642000-74647800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
17	chr16:74642000-74651000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr16:74642000-74652200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr16:74642000-74653200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr16:74642000-74654400	Weak transcription	Duodenum Mucosa	Duodenum
21	chr16:74642000-74655200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr16:74642000-74655200	Weak transcription	Fetal Brain Female	brain
23	chr16:74642000-74655800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr16:74642000-74656000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
25	chr16:74642000-74656000	Weak transcription	Left Ventricle	heart
26	chr16:74642000-74656800	Weak transcription	Liver	Liver
27	chr16:74642000-74657600	Weak transcription	Brain Hippocampus Middle	brain
28	chr16:74642000-74658200	Weak transcription	Right Ventricle	heart
29	chr16:74642200-74648600	Weak transcription	Fetal Stomach	stomach
30	chr16:74642200-74648800	Weak transcription	Primary neutrophils fromperipheralblood	blood
31	chr16:74642200-74652000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
32	chr16:74642200-74652000	Weak transcription	Fetal Intestine Large	intestine
33	chr16:74642200-74653200	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr16:74642200-74653600	Weak transcription	NH-A	brain
35	chr16:74642200-74654200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr16:74642200-74654400	Weak transcription	HMEC	breast
37	chr16:74642200-74654600	Weak transcription	Fetal Muscle Trunk	muscle
38	chr16:74642200-74655200	Weak transcription	Rectal Mucosa Donor 29	rectum
39	chr16:74642200-74655200	Weak transcription	HSMM	muscle
40	chr16:74642200-74655200	Weak transcription	NHDF-Ad	bronchial
41	chr16:74642200-74655800	Weak transcription	Stomach Smooth Muscle	stomach
42	chr16:74642200-74656000	Weak transcription	H9 Cell Line	embryonic stem cell
43	chr16:74642200-74656000	Weak transcription	Fetal Kidney	kidney
44	chr16:74642200-74656000	Weak transcription	Skeletal Muscle Female	skeletal muscle
45	chr16:74642200-74656400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr16:74642200-74656400	Weak transcription	Rectal Smooth Muscle	rectum
47	chr16:74642200-74657400	Weak transcription	Brain Inferior Temporal Lobe	brain
48	chr16:74642200-74688800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr16:74642400-74648800	Weak transcription	HUES48 Cell Line	embryonic stem cell
50	chr16:74642400-74649400	Weak transcription	HUES6 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links