Variant report

Variant	esv2752912
Chromosome Location	chr11:35074167-35238578
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4509)
CpG islands
(count:2139)
Chromatin interactive
region (count:97)
LncRNA
region (count:39)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:4509 , 50 per page) page: 1 2 3 4 5 6 7 ... 91

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:35085029-35085388	K562	blood:	n/a	n/a
2	ARID3A	chr11:35194753-35195096	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:35212245-35212521	HepG2	liver:	n/a	n/a
4	ATF1	chr11:35120645-35121044	K562	blood:	n/a	n/a
5	ATF1	chr11:35099273-35099414	K562	blood:	n/a	n/a
6	ATF1	chr11:35168376-35168687	K562	blood:	n/a	n/a
7	ATF1	chr11:35182060-35182303	K562	blood:	n/a	n/a
8	ATF1	chr11:35079662-35080134	K562	blood:	n/a	n/a
9	ATF1	chr11:35125408-35125579	K562	blood:	n/a	n/a
10	ATF1	chr11:35166888-35167161	K562	blood:	n/a	n/a
11	ATF1	chr11:35122859-35123088	K562	blood:	n/a	n/a
12	ATF1	chr11:35164287-35164318	K562	blood:	n/a	n/a
13	ATF1	chr11:35162652-35162835	K562	blood:	n/a	n/a
14	ATF1	chr11:35084885-35085469	K562	blood:	n/a	n/a
15	ATF1	chr11:35132632-35132924	K562	blood:	n/a	n/a
16	ATF1	chr11:35104027-35104396	K562	blood:	n/a	n/a
17	ATF1	chr11:35133237-35133513	K562	blood:	n/a	n/a
18	ATF1	chr11:35088676-35088928	K562	blood:	n/a	n/a
19	ATF2	chr11:35147513-35148569	GM12878	blood:	n/a	n/a
20	ATF2	chr11:35111140-35111947	GM12878	blood:	n/a	n/a
21	ATF2	chr11:35165372-35166426	GM12878	blood:	n/a	n/a
22	ATF2	chr11:35140329-35140826	GM12878	blood:	n/a	n/a
23	ATF2	chr11:35208765-35209181	GM12878	blood:	n/a	n/a
24	ATF2	chr11:35165624-35166332	GM12878	blood:	n/a	n/a
25	ATF2	chr11:35109062-35110065	GM12878	blood:	n/a	n/a
26	ATF2	chr11:35088556-35089100	GM12878	blood:	n/a	n/a
27	ATF2	chr11:35143863-35144425	GM12878	blood:	n/a	n/a
28	ATF2	chr11:35088511-35089104	GM12878	blood:	n/a	n/a
29	ATF2	chr11:35109087-35109714	GM12878	blood:	n/a	n/a
30	ATF2	chr11:35167420-35168628	GM12878	blood:	n/a	n/a
31	ATF2	chr11:35166448-35167418	GM12878	blood:	n/a	n/a
32	ATF2	chr11:35148675-35149703	GM12878	blood:	n/a	n/a
33	ATF2	chr11:35098997-35100135	GM12878	blood:	n/a	n/a
34	ATF2	chr11:35152590-35153181	GM12878	blood:	n/a	n/a
35	ATF2	chr11:35140337-35140923	GM12878	blood:	n/a	n/a
36	ATF2	chr11:35099013-35100141	GM12878	blood:	n/a	n/a
37	ATF2	chr11:35187310-35187972	GM12878	blood:	n/a	n/a
38	ATF2	chr11:35104643-35105435	GM12878	blood:	n/a	n/a
39	ATF2	chr11:35104602-35105713	GM12878	blood:	n/a	n/a
40	ATF2	chr11:35104016-35104542	GM12878	blood:	n/a	n/a
41	ATF2	chr11:35187309-35188167	GM12878	blood:	n/a	n/a
42	ATF2	chr11:35103848-35104479	GM12878	blood:	n/a	n/a
43	ATF2	chr11:35147745-35149600	GM12878	blood:	n/a	n/a
44	ATF2	chr11:35166629-35167313	GM12878	blood:	n/a	n/a
45	ATF2	chr11:35167580-35168640	GM12878	blood:	n/a	n/a
46	ATF2	chr11:35111179-35111661	GM12878	blood:	n/a	n/a
47	ATF3	chr11:35176584-35176795	K562	blood:	n/a	n/a
48	ATF3	chr11:35188083-35188607	A549	lung:	n/a	n/a
49	BACH1	chr11:35173481-35173712	H1-hESC	embryonic stem cell:	n/a	n/a
50	BACH1	chr11:35237805-35237836	K562	blood:	n/a	n/a

(count:2139 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:35201133-35201183	AG10803	skin:	n/a
2	chr11:35138084-35138134	PANC-1	pancreas:	n/a
3	chr11:35161345-35161395	Caco-2	colon:	n/a
4	chr11:35167041-35167091	HRE	kidney:	n/a
5	chr11:35201133-35201183	AG10803	skin:	n/a
6	chr11:35138084-35138134	PANC-1	pancreas:	n/a
7	chr11:35161345-35161395	Caco-2	colon:	n/a
8	chr11:35167041-35167091	HRE	kidney:	n/a
9	chr11:35086165-35086215	H1-hESC	embryonic stem cell:	embryo
10	chr11:35160498-35160548	NHBE	bronchial:	n/a
11	chr11:35229448-35229498	A549	lung:	n/a
12	chr11:35160330-35160380	HRPEpiC	eye:	n/a
13	chr11:35161229-35161279	AG04450	lung:	fetal
14	chr11:35133274-35133324	H1-hESC	embryonic stem cell:	embryo
15	chr11:35198201-35198251	Caco-2	colon:	n/a
16	chr11:35167041-35167091	HCPEpiC	choroid plexus:	n/a
17	chr11:35158283-35158333	HEK293	kidney:	embryo
18	chr11:35159382-35159432	GM12892	blood:	n/a
19	chr11:35167041-35167091	HEK293	kidney:	embryo
20	chr11:35195513-35195563	Caco-2	colon:	n/a
21	chr11:35160892-35160942	PrEC	prostate:	n/a
22	chr11:35161345-35161395	U87	brain:	n/a
23	chr11:35167041-35167091	MCF-7	breast:	n/a
24	chr11:35138084-35138134	AG10803	skin:	n/a
25	chr11:35161183-35161233	HCM	heart:	n/a
26	chr11:35179802-35179852	NH-A	brain:	n/a
27	chr11:35158283-35158333	GM12891	blood:	n/a
28	chr11:35161900-35161950	NHBE	bronchial:	n/a
29	chr11:35160571-35160621	AG04450	lung:	fetal
30	chr11:35201133-35201183	GM06990	blood:	n/a
31	chr11:35160571-35160621	GM12891	blood:	n/a
32	chr11:35159087-35159137	NH-A	brain:	n/a
33	chr11:35237158-35237208	SK-N-SH	brain:	n/a
34	chr11:35161183-35161233	ProgFib	skin:	n/a
35	chr11:35160330-35160380	H1-hESC	embryonic stem cell:	embryo
36	chr11:35237158-35237208	HRPEpiC	eye:	n/a
37	chr11:35159087-35159137	A549	lung:	n/a
38	chr11:35160892-35160942	HUVEC	blood vessel:	n/a
39	chr11:35159136-35159186	HepG2	liver:	n/a
40	chr11:35198201-35198251	NHDF-neo	bronchial:	n/a
41	chr11:35133274-35133324	Hela-S3	cervix:	n/a
42	chr11:35198201-35198251	ProgFib	skin:	n/a
43	chr11:35201133-35201183	NH-A	brain:	n/a
44	chr11:35188437-35188487	PFSK-1	brain:	n/a
45	chr11:35133274-35133324	SK-N-SH_RA	brain:	n/a
46	chr11:35099055-35099105	AG04450	lung:	fetal
47	chr11:35160709-35160759	K562	blood:	n/a
48	chr11:35188437-35188487	NH-A	brain:	n/a
49	chr11:35160462-35160512	GM12878	blood:	n/a
50	chr11:35186440-35186490	U87	brain:	n/a

(count:97 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr11:35121498..35123460-chr11:35254836..35257289,2	K562	blood:
2	chr11:35132300..35135003-chr11:35146023..35147940,2	MCF-7	breast:
3	chr11:35188706..35190323-chr11:35204261..35206876,2	K562	blood:
4	chr11:35160584..35161366-chr17:72983348..72984211,2	Hela-S3	cervix:
5	chr11:35160366..35160877-chr15:44069390..44069929,2	Hela-S3	cervix:
6	chr11:35160960..35162794-chr11:35186248..35188654,2	MCF-7	breast:
7	chr11:35118109..35120819-chr11:35160068..35162189,2	MCF-7	breast:
8	chr11:35199491..35202638-chr11:35207456..35210593,3	MCF-7	breast:
9	chr11:35160028..35162902-chr11:35183937..35186481,3	MCF-7	breast:
10	chr1:154154871..154155752-chr11:35160501..35161403,2	Hela-S3	cervix:
11	chr11:35104262..35106718-chr11:35159601..35161198,2	MCF-7	breast:
12	chr11:35166380..35169022-chr11:35170596..35172915,2	MCF-7	breast:
13	chr11:35184295..35186190-chr11:35191742..35193747,2	MCF-7	breast:
14	chr11:35154466..35164106-chr11:35164280..35169830,11	MCF-7	breast:
15	chr11:35121360..35123846-chr11:35132606..35135309,2	K562	blood:
16	chr11:35188706..35190323-chr11:35204261..35206876,2	K562	blood:
17	chr11:35163163..35167316-chr11:35171190..35174236,4	K562	blood:
18	chr11:35163163..35167316-chr11:35171190..35174236,4	K562	blood:
19	chr11:35199913..35203665-chr11:35205253..35207234,3	K562	blood:
20	chr11:35183121..35185456-chr11:35188061..35190243,2	MCF-7	breast:
21	chr11:35172301..35174738-chr11:35189496..35192114,2	MCF-7	breast:
22	chr11:35160324..35161311-chr3:14444116..14444878,2	Hela-S3	cervix:
23	chr1:153930650..153931150-chr11:35161047..35161739,2	Hela-S3	cervix:
24	chr11:35186608..35189447-chr11:35199235..35201624,2	MCF-7	breast:
25	chr11:35086278..35088027-chr11:35090428..35092324,3	K562	blood:
26	chr11:35170246..35172817-chr11:35174979..35176507,2	MCF-7	breast:
27	chr11:35101233..35103768-chr11:35185557..35187275,2	MCF-7	breast:
28	chr11:35121360..35123846-chr11:35132606..35135309,2	K562	blood:
29	chr11:35184295..35186190-chr11:35191742..35193747,2	MCF-7	breast:
30	chr1:89149746..89150285-chr11:35160701..35161440,2	HCT-116	colon:
31	chr11:35026967..35028548-chr11:35162664..35165084,2	MCF-7	breast:
32	chr11:35101233..35103768-chr11:35185557..35187275,2	MCF-7	breast:
33	chr11:35135157..35136854-chr11:35159646..35161211,2	MCF-7	breast:
34	chr11:35059235..35060888-chr11:35161011..35163300,2	MCF-7	breast:
35	chr11:35097231..35099674-chr11:35101240..35103980,3	K562	blood:
36	chr11:34947697..34948269-chr11:35163627..35164578,3	K562	blood:
37	chr11:35208907..35210567-chr11:35212909..35215234,2	MCF-7	breast:
38	chr11:35227871..35230257-chr11:35238452..35241345,2	MCF-7	breast:
39	chr11:35160872..35161372-chr12:14923610..14924453,2	Hela-S3	cervix:
40	chr11:35129946..35132170-chr11:35133262..35135380,2	K562	blood:
41	chr11:35169325..35170963-chr11:35175287..35177044,2	K562	blood:
42	chr11:35193443..35196303-chr11:35198924..35201669,2	MCF-7	breast:
43	chr11:35122584..35124925-chr11:35126765..35129371,2	MCF-7	breast:
44	chr11:35169325..35170963-chr11:35175287..35177044,2	K562	blood:
45	chr11:35199491..35202638-chr11:35207456..35210593,3	MCF-7	breast:
46	chr11:35129946..35132170-chr11:35133262..35135380,2	K562	blood:
47	chr11:35052321..35054037-chr11:35088777..35091263,2	K562	blood:
48	chr11:35135735..35137455-chr11:35149991..35152217,2	K562	blood:
49	chr11:35193443..35196303-chr11:35198924..35201669,2	MCF-7	breast:
50	chr11:35087035..35089860-chr11:35091064..35093898,2	MCF-7	breast:

(count:39 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CD44-3	chr11:35132621-35132927	NONHSAT018774
2	lnc-SLC1A2-2	chr11:35157893-35158084	XLOC_009416
3	lnc-SLC1A2-2	chr11:35159245-35159273	ENSG00000255521.1
4	lnc-PDHX-3	chr11:35108965-35110133	NONHSAT018772
5	lnc-APIP-1	chr11:35088226-35088723	NONHSAT018769
6	lnc-PDHX-5	chr11:35211473-35211612	NONHSAT018779
7	lnc-APIP-1	chr11:35086667-35086860	NONHSAT018769
8	lnc-SLC1A2-1	chr11:35236378-35236532	ENSG00000255443.1
9	lnc-PDHX-5	chr11:35227332-35227594	NONHSAT018781
10	lnc-PDHX-3	chr11:35107760-35107870	NONHSAT018772
11	lnc-PDHX-5	chr11:35226059-35226187	NONHSAT018781
12	lnc-PDHX-5	chr11:35227262-35227790	NONHSAT018783
13	lnc-SLC1A2-2	chr11:35157781-35158173	ENSG00000255521.1
14	lnc-PDHX-4	chr11:35218709-35219340	NONHSAT018780
15	lnc-APIP-1	chr11:35086673-35086860	XLOC_009415
16	lnc-PDHX-3	chr11:35119168-35119365	NONHSAT018768
17	lnc-PDHX-5	chr11:35223215-35223334	NONHSAT018781
18	lnc-PDHX-5	chr11:35226059-35226358	NONHSAT018779
19	lnc-SLC1A2-2	chr11:35159245-35159579	ENSG00000255521.1
20	lnc-PDHX-1	chr11:35234097-35234396	ENSG00000251194
21	lnc-APIP-1	chr11:35080723-35081531	NONHSAT018769
22	lnc-SLC1A2-2	chr11:35150431-35150467	XLOC_009416
23	lnc-PDHX-5	chr11:35232793-35232996	NONHSAT018782
24	lnc-PDHX-4	chr11:35219416-35220102	NONHSAT018780
25	lnc-PDHX-1	chr11:35235151-35235554	ENSG00000251194
26	lnc-PDHX-5	chr11:35229652-35229711	NONHSAT018783
27	lnc-CD44-4	chr11:35124735-35124991	NONHSAT018773
28	lnc-PDHX-5	chr11:35223168-35223334	NONHSAT018782
29	lnc-PDHX-5	chr11:35236399-35236461	NONHSAT018782
30	lnc-SLC1A2-1	chr11:35231890-35232321	ENSG00000255443.1
31	lnc-SLC1A2-2	chr11:35154202-35154687	ENSG00000255521.1
32	lnc-PDHX-3	chr11:35109985-35110151	NONHSAT018768
33	lnc-APIP-1	chr11:35095464-35095505	XLOC_009415
34	lnc-PDHX-5	chr11:35222691-35222742	NONHSAT018781
35	lnc-PDHX-3	chr11:35140600-35142723	NONHSAT018772
36	lnc-PDHX-3	chr11:35119065-35120242	NONHSAT018772
37	lnc-CD44-5	chr11:35103203-35103622	NONHSAT018771
38	lnc-PDHX-3	chr11:35112276-35112331	NONHSAT018772
39	lnc-SLC1A2-2	chr11:35157893-35158173	ENSG00000255521.1

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	CD44	hsa-miR-520c-3p	chr11:35211491-35211514
2	CD44	hsa-miR-373-3p	chr11:35211492-35211514

Variant related genes	Relation type
ENSG00000255443	TF binding region
ENSG00000269766	TF binding region
CD44	TF binding region
ENSG00000251194	TF binding region
ENSG00000255521	TF binding region
ENSG00000255443	CpG island
ENSG00000269766	CpG island
CD44	CpG island
ENSG00000251194	CpG island
ENSG00000255521	CpG island
ENSG00000120129	chromatin interactions
ENSG00000197837	chromatin interactions
ENSG00000223247	chromatin interactions
ENSG00000109089	chromatin interactions
ENSG00000143549	chromatin interactions
ENSG00000125459	chromatin interactions
ENSG00000199347	chromatin interactions
ENSG00000271853	chromatin interactions
ENSG00000160741	chromatin interactions
ENSG00000255521	chromatin interactions
ENSG00000272030	chromatin interactions
ENSG00000269946	chromatin interactions
ENSG00000026508	chromatin interactions
ENSG00000232519	chromatin interactions
ENSG00000065243	chromatin interactions
ENSG00000128886	chromatin interactions
ENSG00000269766	chromatin interactions
ENSG00000110435	chromatin interactions
ENSG00000131389	chromatin interactions
ENSG00000255443	chromatin interactions
ENSG00000160813	chromatin interactions
ENSG00000177971	chromatin interactions
POU2F1	miRNA target sites
GANAB	miRNA target sites
CUEDC2	miRNA target sites
GLCE	miRNA target sites

Extended variants
information (count: 6620 )
Associated
traits (count: 84 )

Variant overlapped rSNPs/rCNVs (count:6620 , 50 per page) page: 1 2 3 4 5 6 7 ... 133

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs737502	chr11:35074167-35074168	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs556929173	chr11:35074253-35074254	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs577113092	chr11:35074293-35074294	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs117900957	chr11:35074308-35074309	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs374586572	chr11:35074313-35074314	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs572580361	chr11:35074317-35074318	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs541492577	chr11:35074321-35074322	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs561459623	chr11:35074323-35074324	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs192777403	chr11:35074336-35074337	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs73439246	chr11:35074365-35074366	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs543653528	chr11:35074474-35074475	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs733082	chr11:35074476-35074477	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs370347607	chr11:35074488-35074489	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs533723081	chr11:35074493-35074494	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs12786858	chr11:35074571-35074572	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs12421005	chr11:35074631-35074632	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs185550228	chr11:35074650-35074651	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs693163	chr11:35074665-35074666	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs557560138	chr11:35074677-35074678	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs569337334	chr11:35074687-35074688	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs537847022	chr11:35074689-35074690	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs138454019	chr11:35074705-35074706	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs570638256	chr11:35074722-35074723	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs539374809	chr11:35074729-35074730	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs190807404	chr11:35074743-35074744	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs572664903	chr11:35074761-35074762	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs535280546	chr11:35074767-35074768	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs555125411	chr11:35074780-35074781	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs181925818	chr11:35074801-35074802	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs61882219	chr11:35074836-35074837	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs564144344	chr11:35074838-35074839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs184421344	chr11:35074874-35074875	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs199593416	chr11:35074880-35074881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs189122366	chr11:35074925-35074926	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs560782785	chr11:35074929-35074930	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs142007279	chr11:35074930-35074931	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs181196333	chr11:35074943-35074944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs531865811	chr11:35074949-35074950	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs551462034	chr11:35074964-35074965	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs627096	chr11:35074966-35074967	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs533944058	chr11:35075065-35075066	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs546445713	chr11:35075073-35075074	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs12419825	chr11:35075109-35075110	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
44	rs536142882	chr11:35075120-35075121	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs112353115	chr11:35075132-35075133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs555579125	chr11:35075150-35075151	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs139451324	chr11:35075153-35075154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs186675482	chr11:35075165-35075166	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs540578194	chr11:35075184-35075185	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs554112116	chr11:35075188-35075189	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:84)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	21364760	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Lung squamous cell carcinoma	20842114	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:5657 , 50 per page) page: 1 2 3 4 5 6 7 ... 114

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:35064000-35077200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr11:35070600-35078600	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr11:35070600-35087000	Weak transcription	Duodenum Mucosa	Duodenum
4	chr11:35070800-35079800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
5	chr11:35072400-35077200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr11:35072600-35074600	Enhancers	Primary hematopoietic stem cells	blood
7	chr11:35072800-35074200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr11:35072800-35074200	Weak transcription	Fetal Muscle Leg	muscle
9	chr11:35073000-35079000	Weak transcription	Monocytes-CD14+_RO01746	blood
10	chr11:35073200-35074600	Weak transcription	Primary B cells from cord blood	blood
11	chr11:35073200-35078200	Weak transcription	Dnd41	blood
12	chr11:35073200-35078600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
13	chr11:35073200-35079200	Weak transcription	Primary T cells fromperipheralblood	blood
14	chr11:35073200-35079800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
15	chr11:35073200-35081000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr11:35073400-35078200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
17	chr11:35073600-35078800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
18	chr11:35073600-35079200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
19	chr11:35073800-35078200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
20	chr11:35073800-35079600	Weak transcription	Primary T cells from cord blood	blood
21	chr11:35074000-35077200	Weak transcription	Primary T helper cells PMA-I stimulated	--
22	chr11:35074000-35078600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
23	chr11:35074000-35078800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
24	chr11:35074000-35079200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
25	chr11:35074200-35074600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
26	chr11:35074600-35074800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr11:35074600-35074800	Enhancers	Fetal Muscle Leg	muscle
28	chr11:35074800-35077000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr11:35076000-35077800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
30	chr11:35076800-35077400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr11:35077000-35077800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr11:35077200-35077400	Enhancers	Primary T helper cells PMA-I stimulated	--
33	chr11:35077200-35077400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
34	chr11:35077200-35080000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr11:35077400-35077800	Weak transcription	Primary T helper cells PMA-I stimulated	--
36	chr11:35077400-35084200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr11:35077600-35079000	Enhancers	HUVEC	blood vessel
38	chr11:35077600-35080200	Enhancers	HMEC	breast
39	chr11:35077600-35080200	Enhancers	NHEK	skin
40	chr11:35077800-35078000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
41	chr11:35077800-35078800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
42	chr11:35077800-35079800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
43	chr11:35077800-35082000	Enhancers	Primary T helper cells PMA-I stimulated	--
44	chr11:35078000-35078400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr11:35078000-35078400	Enhancers	Muscle Satellite Cultured Cells	--
46	chr11:35078000-35078400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
47	chr11:35078000-35079000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
48	chr11:35078000-35079200	Enhancers	Breast Myoepithelial Primary Cells	Breast
49	chr11:35078000-35080400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
50	chr11:35078200-35078400	Enhancers	Primary B cells from cord blood	blood

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