Variant report

Variant	esv2753383
Chromosome Location	chr13:92226599-92462699
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1905)
CpG islands
(count:122)
Chromatin interactive
region (count:279)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1905 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr13:92400276-92400278	K562	blood:	n/a	n/a
2	ARID3A	chr13:92374274-92374954	K562	blood:	n/a	chr13:92374700-92374716 chr13:92374699-92374715
3	ARID3A	chr13:92429079-92429263	K562	blood:	n/a	n/a
4	ARID3A	chr13:92228898-92229139	K562	blood:	n/a	n/a
5	ARID3A	chr13:92250788-92250800	K562	blood:	n/a	n/a
6	ARID3A	chr13:92374503-92374961	HepG2	liver:	n/a	chr13:92374700-92374716 chr13:92374699-92374715
7	ARID3A	chr13:92361017-92361101	K562	blood:	n/a	n/a
8	ARID3A	chr13:92336518-92336523	K562	blood:	n/a	n/a
9	ARID3A	chr13:92287354-92287373	K562	blood:	n/a	n/a
10	ATF1	chr13:92407536-92407624	K562	blood:	n/a	n/a
11	ATF1	chr13:92267077-92267634	K562	blood:	n/a	n/a
12	ATF1	chr13:92302279-92302492	K562	blood:	n/a	n/a
13	ATF1	chr13:92450496-92450693	K562	blood:	n/a	n/a
14	ATF1	chr13:92321353-92321878	K562	blood:	n/a	n/a
15	ATF1	chr13:92442472-92442784	K562	blood:	n/a	n/a
16	ATF1	chr13:92461246-92461251	K562	blood:	n/a	n/a
17	ATF1	chr13:92425309-92425443	K562	blood:	n/a	n/a
18	ATF1	chr13:92460655-92460924	K562	blood:	n/a	n/a
19	ATF1	chr13:92440418-92440555	K562	blood:	n/a	n/a
20	ATF1	chr13:92356294-92356400	K562	blood:	n/a	n/a
21	ATF1	chr13:92353705-92354505	K562	blood:	n/a	n/a
22	ATF1	chr13:92368532-92369138	K562	blood:	n/a	n/a
23	ATF1	chr13:92390219-92390652	K562	blood:	n/a	n/a
24	ATF1	chr13:92300202-92300401	K562	blood:	n/a	n/a
25	ATF1	chr13:92364419-92364627	K562	blood:	n/a	n/a
26	ATF1	chr13:92296565-92296754	K562	blood:	n/a	n/a
27	ATF1	chr13:92428589-92429237	K562	blood:	n/a	n/a
28	ATF1	chr13:92355389-92355814	K562	blood:	n/a	n/a
29	ATF1	chr13:92409648-92409956	K562	blood:	n/a	n/a
30	ATF1	chr13:92400991-92401519	K562	blood:	n/a	n/a
31	ATF1	chr13:92237688-92238007	K562	blood:	n/a	n/a
32	ATF1	chr13:92415916-92416180	K562	blood:	n/a	n/a
33	ATF1	chr13:92326350-92326951	K562	blood:	n/a	n/a
34	ATF2	chr13:92299541-92299961	H1-hESC	embryonic stem cell:	n/a	n/a
35	ATF2	chr13:92299518-92299956	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF3	chr13:92299657-92299864	K562	blood:	n/a	n/a
37	BACH1	chr13:92281248-92281314	K562	blood:	n/a	n/a
38	BACH1	chr13:92440748-92440895	K562	blood:	n/a	n/a
39	BACH1	chr13:92457657-92457845	K562	blood:	n/a	n/a
40	BACH1	chr13:92430443-92430444	K562	blood:	n/a	n/a
41	BACH1	chr13:92336388-92336574	K562	blood:	n/a	n/a
42	BACH1	chr13:92361028-92361147	K562	blood:	n/a	n/a
43	BACH1	chr13:92427738-92428055	K562	blood:	n/a	n/a
44	BACH1	chr13:92239511-92240095	K562	blood:	n/a	n/a
45	BACH1	chr13:92326101-92326476	K562	blood:	n/a	n/a
46	BACH1	chr13:92400065-92400187	K562	blood:	n/a	n/a
47	BACH1	chr13:92368006-92368076	K562	blood:	n/a	n/a
48	BACH1	chr13:92371342-92371659	H1-hESC	embryonic stem cell:	n/a	n/a
49	BACH1	chr13:92352128-92352146	K562	blood:	n/a	n/a
50	BACH1	chr13:92267512-92267723	K562	blood:	n/a	n/a

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:92426491-92426541	HRE	kidney:	n/a
2	chr13:92305086-92305136	LNCaP	prostate:	n/a
3	chr13:92426491-92426541	PFSK-1	brain:	n/a
4	chr13:92426491-92426541	ECC-1	luminal epithelium:	n/a
5	chr13:92426491-92426541	LNCaP	prostate:	n/a
6	chr13:92426491-92426541	GM12891	blood:	n/a
7	chr13:92305086-92305136	AG04450	lung:	fetal
8	chr13:92305086-92305136	GM12892	blood:	n/a
9	chr13:92305086-92305136	HNPCEpiC	eye:	n/a
10	chr13:92426491-92426541	HMEC	breast:	n/a
11	chr13:92426491-92426541	HEEpiC	esophagus:	n/a
12	chr13:92305086-92305136	SAEC	small airway:	n/a
13	chr13:92305086-92305136	SK-N-SH	brain:	n/a
14	chr13:92305086-92305136	HCT-116	colon:	n/a
15	chr13:92305086-92305136	PFSK-1	brain:	n/a
16	chr13:92426491-92426541	AG04450	lung:	fetal
17	chr13:92426491-92426541	NHBE	bronchial:	n/a
18	chr13:92426491-92426541	GM12878	blood:	n/a
19	chr13:92426491-92426541	PrEC	prostate:	n/a
20	chr13:92426491-92426541	HepG2	liver:	n/a
21	chr13:92426491-92426541	ProgFib	skin:	n/a
22	chr13:92305086-92305136	GM19239	blood:	n/a
23	chr13:92426491-92426541	SKMC	muscle:	n/a
24	chr13:92305086-92305136	K562	blood:	n/a
25	chr13:92305086-92305136	AG09319	gingival:	n/a
26	chr13:92305086-92305136	IMR90	lung:	fetal
27	chr13:92305086-92305136	Caco-2	colon:	n/a
28	chr13:92305086-92305136	H1-hESC	embryonic stem cell:	embryo
29	chr13:92305086-92305136	NHBE	bronchial:	n/a
30	chr13:92305086-92305136	ProgFib	skin:	n/a
31	chr13:92305086-92305136	GM12878	blood:	n/a
32	chr13:92426491-92426541	CMK	blood:	n/a
33	chr13:92305086-92305136	AG09309	skin:	n/a
34	chr13:92305086-92305136	MCF10A-Er-Src	breast:	n/a
35	chr13:92426491-92426541	SK-N-SH	brain:	n/a
36	chr13:92426491-92426541	GM06990	blood:	n/a
37	chr13:92305086-92305136	AG04449	skin:	fetal
38	chr13:92426491-92426541	ovcar-3	ovarian:	n/a
39	chr13:92305086-92305136	ovcar-3	ovarian:	n/a
40	chr13:92426491-92426541	BJ	skin:	n/a
41	chr13:92305086-92305136	HL-60	blood:	n/a
42	chr13:92305086-92305136	MCF-7	breast:	n/a
43	chr13:92305086-92305136	HAEpiC	amniotic membrane:	n/a
44	chr13:92426491-92426541	PANC-1	pancreas:	n/a
45	chr13:92305086-92305136	A549	lung:	n/a
46	chr13:92426491-92426541	Jurkat	blood:	n/a
47	chr13:92305086-92305136	RPTEC	kidney:	n/a
48	chr13:92426491-92426541	H1-hESC	embryonic stem cell:	embryo
49	chr13:92426491-92426541	NT2-D1	testis:	n/a
50	chr13:92305086-92305136	U87	brain:	n/a

(count:279 , 50 per page) page: 1 2 3 4 5 6

No.	Distal block	Cell Line	Cell type
1	chr13:92239975..92242256-chr13:92242263..92244632,2	K562	blood:
2	chr13:92349578..92351977-chr13:92437335..92438959,2	K562	blood:
3	chr13:92217367..92219324-chr13:92267439..92269742,2	K562	blood:
4	chr13:92416606..92418610-chr13:92424268..92426806,2	K562	blood:
5	chr13:92430631..92432524-chr13:92439233..92440764,2	K562	blood:
6	chr13:91999828..92001377-chr13:92382768..92385377,2	K562	blood:
7	chr13:92306622..92308651-chr13:92311671..92313679,2	K562	blood:
8	chr13:92291806..92294892-chr13:92297523..92300021,4	K562	blood:
9	chr13:92306622..92308651-chr13:92311671..92313679,2	K562	blood:
10	chr13:92357827..92359421-chr13:92380586..92382963,2	K562	blood:
11	chr13:92008256..92010781-chr13:92387538..92390308,3	K562	blood:
12	chr13:92228802..92230476-chr13:92232777..92234570,2	K562	blood:
13	chr13:91999830..92001419-chr13:92337939..92340506,2	K562	blood:
14	chr13:92003420..92005898-chr13:92360065..92363004,2	K562	blood:
15	chr13:92271343..92273081-chr13:92275207..92276860,2	K562	blood:
16	chr13:92020617..92022314-chr13:92292889..92295521,2	K562	blood:
17	chr13:92331277..92334004-chr13:92336650..92338703,2	K562	blood:
18	chr13:92411924..92414479-chr13:92417202..92420312,3	K562	blood:
19	chr13:92236165..92237762-chr13:92267223..92269293,2	K562	blood:
20	chr13:92230040..92232872-chr13:92241725..92244937,3	K562	blood:
21	chr13:91999747..92001279-chr13:92313368..92315188,2	K562	blood:
22	chr13:92009446..92011873-chr13:92285779..92287489,2	K562	blood:
23	chr13:92271797..92272395-chr13:92305794..92306408,2	K562	blood:
24	chr13:92351988..92354291-chr13:92355999..92358274,2	K562	blood:
25	chr13:92303709..92306538-chr13:92310569..92313566,2	K562	blood:
26	chr13:92329658..92332164-chr13:92415917..92418730,3	K562	blood:
27	chr13:92351988..92354291-chr13:92355999..92358274,2	K562	blood:
28	chr13:91999695..92001693-chr13:92369101..92370958,3	K562	blood:
29	chr13:92408850..92411747-chr13:92422307..92426184,4	K562	blood:
30	chr13:91999942..92002142-chr13:92375308..92377131,2	K562	blood:
31	chr13:92058845..92059502-chr13:92434132..92434731,2	MCF-7	breast:
32	chr13:92236216..92239196-chr13:92246077..92248763,2	K562	blood:
33	chr13:92239975..92242011-chr13:92243132..92246176,3	K562	blood:
34	chr13:91998514..92002509-chr13:92292790..92300343,7	K562	blood:
35	chr13:92238105..92241070-chr13:92253947..92255576,2	K562	blood:
36	chr13:92007816..92009567-chr13:92393385..92396123,2	K562	blood:
37	chr13:92035701..92038096-chr13:92377993..92380775,2	K562	blood:
38	chr13:91998739..92001171-chr13:92343313..92345565,2	K562	blood:
39	chr13:92243681..92245220-chr13:92248904..92251183,2	K562	blood:
40	chr13:92261757..92264184-chr13:92265065..92267331,2	K562	blood:
41	chr13:92376837..92379640-chr13:92380146..92383105,2	K562	blood:
42	chr13:91998400..92000626-chr13:92417497..92419745,2	K562	blood:
43	chr13:92349502..92351243-chr13:92353642..92355280,2	K562	blood:
44	chr13:92261757..92264184-chr13:92265065..92267331,2	K562	blood:
45	chr13:92367060..92370177-chr13:92371319..92374690,3	K562	blood:
46	chr13:92403864..92405502-chr13:92423546..92426360,2	K562	blood:
47	chr13:92280416..92282576-chr13:92286859..92289311,3	K562	blood:
48	chr13:92262332..92265474-chr13:92267151..92270274,3	K562	blood:
49	chr13:92002483..92004048-chr13:92226759..92228533,2	K562	blood:
50	chr13:92272945..92275845-chr13:92297688..92299571,2	K562	blood:

No data

Variant related genes	Relation type
GPC5	TF binding region
GPC5	CpG island
ENSG00000215417	chromatin interactions
ENSG00000165417	chromatin interactions
ENSG00000179399	chromatin interactions

Extended variants
information (count: 8089 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:8089 , 50 per page) page: 1 2 3 4 5 6 7 ... 162

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs9589297	chr13:92226609-92226610	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs529143495	chr13:92226635-92226636	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs542561581	chr13:92226653-92226654	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs141026748	chr13:92226684-92226685	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs146910820	chr13:92226756-92226757	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs372432114	chr13:92226810-92226811	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs74823412	chr13:92226813-92226814	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs565210752	chr13:92226874-92226875	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs139328908	chr13:92226893-92226894	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs551185750	chr13:92226934-92226935	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs567904350	chr13:92226938-92226939	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs568892570	chr13:92226972-92226973	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs115180969	chr13:92226992-92226993	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs547275327	chr13:92227009-92227010	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs567170251	chr13:92227058-92227059	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs76418370	chr13:92227088-92227089	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs557766037	chr13:92227090-92227091	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs577652562	chr13:92227092-92227093	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs536792667	chr13:92227112-92227113	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs114421946	chr13:92227148-92227149	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs141997980	chr13:92227157-92227158	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs192341715	chr13:92227172-92227173	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs559356187	chr13:92227174-92227175	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs145757497	chr13:92227195-92227196	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs564454864	chr13:92227197-92227198	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs138556645	chr13:92227257-92227258	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs183341641	chr13:92227266-92227267	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs531022085	chr13:92227268-92227269	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs188033617	chr13:92227308-92227309	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs117136316	chr13:92227327-92227328	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs543558924	chr13:92227339-92227340	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs530284490	chr13:92227344-92227345	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs192234937	chr13:92227392-92227393	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs547193235	chr13:92227427-92227428	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs184356632	chr13:92227429-92227430	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs371695516	chr13:92227450-92227451	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs189244053	chr13:92227467-92227468	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs544062171	chr13:92227484-92227485	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs144475094	chr13:92227540-92227541	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs149591194	chr13:92227593-92227594	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs374674012	chr13:92227595-92227596	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs192837857	chr13:92227640-92227641	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs148037925	chr13:92227661-92227662	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs72641437	chr13:92227677-92227678	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs553165381	chr13:92227681-92227682	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs573044890	chr13:92227806-92227807	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs11843825	chr13:92227811-92227812	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs184002869	chr13:92227843-92227844	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs575667685	chr13:92227854-92227855	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs549596864	chr13:92227855-92227856	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Myoepithelioma	18604193	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	18632612	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Melanoma	18172304	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Basal cell lymphoma	17053054	CNVD
Metanephric adenoma	20802469	CNVD
Gastric cancer	17908304	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	21965145	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Cancer	21220470	CNVD
Cancer	21183584	CNVD
Omodysplasia	19481194	CNVD
Breast cancer	22032731	CNVD
Mantle cell lymphoma	19690137	CNVD
Rhabdomyosarcoma	17210683	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Breast cancer	21364760	CNVD
Medulloblastoma	19270706	CNVD
Myelofibrosis	22110671	CNVD
coloboma	21285886	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	19759907	CNVD
Wilms tumour	21544195	CNVD
Acute myeloid leukemia	19651601	CNVD
Effusion lymphoma	18079361	CNVD
Developmental delay	21147756	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Osteosarcoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:313 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:92230800-92262000	Weak transcription	Right Atrium	heart
2	chr13:92239800-92240200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr13:92240000-92240600	Enhancers	Colon Smooth Muscle	Colon
4	chr13:92240200-92240600	Enhancers	Brain Anterior Caudate	brain
5	chr13:92244200-92245000	Enhancers	Hela-S3	cervix
6	chr13:92244400-92245000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr13:92245000-92245200	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr13:92245000-92246400	Weak transcription	Hela-S3	cervix
9	chr13:92245200-92245400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr13:92246400-92247000	Enhancers	Hela-S3	cervix
11	chr13:92247000-92250200	Weak transcription	Hela-S3	cervix
12	chr13:92250200-92250800	Enhancers	Hela-S3	cervix
13	chr13:92259600-92260600	Enhancers	Hela-S3	cervix
14	chr13:92260600-92260800	Flanking Active TSS	Hela-S3	cervix
15	chr13:92260800-92261200	Enhancers	Hela-S3	cervix
16	chr13:92261200-92261600	Flanking Active TSS	Hela-S3	cervix
17	chr13:92261400-92262000	Enhancers	Ovary	ovary
18	chr13:92261400-92264200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
19	chr13:92261600-92261800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr13:92261600-92262000	Active TSS	Hela-S3	cervix
21	chr13:92261600-92262400	Enhancers	Fetal Lung	lung
22	chr13:92261800-92262000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
23	chr13:92261800-92262400	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
24	chr13:92262000-92262400	Flanking Active TSS	Hela-S3	cervix
25	chr13:92262000-92262600	Flanking Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
26	chr13:92262000-92262600	Enhancers	Right Atrium	heart
27	chr13:92262400-92262600	Active TSS	Hela-S3	cervix
28	chr13:92262400-92263000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
29	chr13:92262600-92262800	Active TSS	Right Atrium	heart
30	chr13:92262600-92262800	Flanking Active TSS	Hela-S3	cervix
31	chr13:92262600-92263000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
32	chr13:92262800-92263200	Active TSS	Hela-S3	cervix
33	chr13:92262800-92264000	Weak transcription	Right Atrium	heart
34	chr13:92263200-92263800	Flanking Active TSS	Hela-S3	cervix
35	chr13:92263800-92264400	Enhancers	Hela-S3	cervix
36	chr13:92264000-92264200	Enhancers	Right Atrium	heart
37	chr13:92264400-92273400	Weak transcription	Hela-S3	cervix
38	chr13:92270600-92270800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr13:92270800-92275600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr13:92272800-92273600	Enhancers	Placenta Amnion	Placenta Amnion
41	chr13:92273400-92275800	Enhancers	Hela-S3	cervix
42	chr13:92273600-92274200	Weak transcription	Placenta Amnion	Placenta Amnion
43	chr13:92274200-92274400	Enhancers	Placenta Amnion	Placenta Amnion
44	chr13:92274400-92276000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
45	chr13:92274800-92276000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr13:92275400-92276000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr13:92275600-92275800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
48	chr13:92275800-92276000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr13:92275800-92282000	Weak transcription	Hela-S3	cervix
50	chr13:92282000-92285600	Enhancers	Hela-S3	cervix

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links