Variant report

Variant	esv275392
Chromosome Location	chr8:9396173-9397338
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:9381679..9385317-chr8:9394416..9398021,3	K562	blood:
2	chr8:9395511..9397201-chr8:9397334..9400300,2	K562	blood:
3	chr8:9395511..9397201-chr8:9397334..9400300,2	K562	blood:
4	chr8:9393461..9396272-chr8:9412433..9414055,2	MCF-7	breast:
5	chr8:9395625..9398112-chr8:9401511..9403684,2	K562	blood:

Variant related genes	Relation type
ENSG00000173273	chromatin interactions
ENSG00000272267	chromatin interactions

Extended variants
information (count: 59 )
Associated
traits (count: 136 )

Variant overlapped rSNPs/rCNVs (count:59 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs144973394	chr8:9396260-9396261	Weak transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs530520659	chr8:9396295-9396296	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs533545529	chr8:9396299-9396300	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs10094314	chr8:9396356-9396357	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs148284211	chr8:9396360-9396361	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs535581932	chr8:9396398-9396399	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs548806194	chr8:9396403-9396404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs565294751	chr8:9396412-9396413	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs191774150	chr8:9396445-9396446	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs184318204	chr8:9396455-9396456	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs186731394	chr8:9396468-9396469	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs191534333	chr8:9396473-9396474	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs562372610	chr8:9396493-9396494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs184429383	chr8:9396498-9396499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs117060511	chr8:9396499-9396500	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs113283856	chr8:9396568-9396569	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs542269521	chr8:9396570-9396571	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs562181080	chr8:9396619-9396620	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs572445998	chr8:9396627-9396628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs528782171	chr8:9396636-9396637	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs7829065	chr8:9396649-9396650	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs564756720	chr8:9396673-9396674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs372424308	chr8:9396682-9396683	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs533713793	chr8:9396723-9396724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs543649141	chr8:9396733-9396734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs117707224	chr8:9396742-9396743	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs545610752	chr8:9396780-9396781	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs200254268	chr8:9396783-9396784	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs529472385	chr8:9396813-9396814	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs7825581	chr8:9396814-9396815	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs565459075	chr8:9396843-9396844	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs528054277	chr8:9396846-9396847	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs550996356	chr8:9396852-9396853	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs34622193	chr8:9396858-9396859	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs565462429	chr8:9396883-9396884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs539862979	chr8:9396912-9396913	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs566594988	chr8:9396936-9396937	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs190493050	chr8:9396937-9396938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs193105361	chr8:9396968-9396969	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs111568559	chr8:9396988-9396989	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs150784813	chr8:9396996-9396997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs555877691	chr8:9397009-9397010	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs572609209	chr8:9397018-9397019	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs372986193	chr8:9397051-9397052	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs190164476	chr8:9397095-9397096	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs181151664	chr8:9397112-9397113	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs544051827	chr8:9397126-9397127	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs552896647	chr8:9397150-9397151	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs563840610	chr8:9397151-9397152	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs529460328	chr8:9397152-9397153	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:136)

Disease	PMID	Source
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Autism	22495311	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	21990379	CNVD
Psoriasis	20403174	CNVD
Psoriasis	20663923	CNVD
Crohn''s disease	16909382	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Crohn''s disease	20877625	CNVD
Inflammatory disorder	20877625	CNVD
Cardiac defect	21933911	CNVD
Psoriasis	18059266	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Psoriasis	20877625	CNVD
Mental retardation	17847001	CNVD
Prostate cancer	17217626	CNVD
Schizophrenia	21399695	CNVD
Colorectal cancer	21128281	CNVD
Colorectal cancer	19455253	CNVD
Psoriasis	18848619	CNVD
Squamous cell cancer	19047905	CNVD
Colorectal cancer	17229543	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Bladder cancer	21909424	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Developmental disorder	20461109	CNVD
abnormal development	18461090	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Glioblastoma multiforme	21138945	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:9390000-9409800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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