Variant report

Variant	esv2756104
Chromosome Location	chrX:56292362-56824154
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3809)
CpG islands
(count:1283)
Chromatin interactive
region (count:62)
LncRNA
region (count:25)
Mature miRNA
region (count: 0)
miRNA target
sites (count:2)

(count:3809 , 50 per page) page: 1 2 3 4 5 6 7 ... 77

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chrX:56589498-56590094	K562	blood:	n/a	n/a
2	ARID3A	chrX:56593079-56593262	HepG2	liver:	n/a	n/a
3	ARID3A	chrX:56589570-56590129	HepG2	liver:	n/a	n/a
4	ARID3A	chrX:56752993-56753362	K562	blood:	n/a	n/a
5	ATF2	chrX:56295270-56295753	GM12878	blood:	n/a	n/a
6	ATF2	chrX:56790827-56791243	GM12878	blood:	n/a	n/a
7	ATF2	chrX:56790124-56790541	GM12878	blood:	n/a	n/a
8	ATF2	chrX:56790757-56791316	GM12878	blood:	n/a	n/a
9	ATF3	chrX:56771415-56771798	HCT-116	colon:	n/a	n/a
10	ATF3	chrX:56771375-56771803	HCT-116	colon:	n/a	n/a
11	BACH1	chrX:56534655-56534827	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chrX:56393670-56393714	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chrX:56596195-56596448	K562	blood:	n/a	n/a
14	BATF	chrX:56799881-56800556	GM12878	blood:	n/a	n/a
15	BATF	chrX:56408742-56408920	GM12878	blood:	n/a	chrX:56408862-56408873
16	BATF	chrX:56788750-56789058	GM12878	blood:	n/a	n/a
17	BATF	chrX:56804693-56805278	GM12878	blood:	n/a	n/a
18	BATF	chrX:56794479-56795154	GM12878	blood:	n/a	n/a
19	BATF	chrX:56590726-56591085	GM12878	blood:	n/a	n/a
20	BATF	chrX:56805573-56805799	GM12878	blood:	n/a	n/a
21	BATF	chrX:56794060-56794375	GM12878	blood:	n/a	n/a
22	BATF	chrX:56800171-56800397	GM12878	blood:	n/a	n/a
23	BATF	chrX:56799291-56799876	GM12878	blood:	n/a	n/a
24	BATF	chrX:56799455-56799777	GM12878	blood:	n/a	n/a
25	BATF	chrX:56794769-56794995	GM12878	blood:	n/a	n/a
26	BATF	chrX:56805283-56805958	GM12878	blood:	n/a	n/a
27	BATF	chrX:56804857-56805179	GM12878	blood:	n/a	n/a
28	BATF	chrX:56295315-56295669	GM12878	blood:	n/a	n/a
29	BATF	chrX:56408679-56409026	GM12878	blood:	n/a	chrX:56408862-56408873
30	BATF	chrX:56295292-56295609	GM12878	blood:	n/a	n/a
31	BATF	chrX:56643166-56643363	GM12878	blood:	n/a	n/a
32	BATF	chrX:56794004-56794474	GM12878	blood:	n/a	n/a
33	BCL11A	chrX:56804834-56805095	GM12878	blood:	n/a	n/a
34	BCL11A	chrX:56799432-56799693	GM12878	blood:	n/a	n/a
35	BCL11A	chrX:56793982-56795226	GM12878	blood:	n/a	chrX:56794806-56794815 chrX:56794665-56794678
36	BCL11A	chrX:56805267-56805970	GM12878	blood:	n/a	chrX:56805469-56805482 chrX:56805610-56805619
37	BCL11A	chrX:56794463-56795166	GM12878	blood:	n/a	chrX:56794806-56794815 chrX:56794665-56794678
38	BCL11A	chrX:56794063-56794291	GM12878	blood:	n/a	n/a
39	BCL11A	chrX:56799865-56800568	GM12878	blood:	n/a	chrX:56800208-56800217 chrX:56800067-56800080
40	BCL11A	chrX:56799196-56800628	GM12878	blood:	n/a	chrX:56800208-56800217 chrX:56800067-56800080 chrX:56799267-56799280
41	BCL11A	chrX:56804598-56806030	GM12878	blood:	n/a	chrX:56804669-56804682 chrX:56805469-56805482 chrX:56805610-56805619
42	BCLAF1	chrX:56790707-56791389	GM12878	blood:	n/a	chrX:56790930-56790939 chrX:56790789-56790802
43	BCLAF1	chrX:56759936-56760248	GM12878	blood:	n/a	n/a
44	BCLAF1	chrX:56809838-56810400	GM12878	blood:	n/a	chrX:56810049-56810058
45	BCLAF1	chrX:56753084-56753420	GM12878	blood:	n/a	n/a
46	BCLAF1	chrX:56790121-56790609	GM12878	blood:	n/a	chrX:56790419-56790428 chrX:56790418-56790427
47	BCLAF1	chrX:56790075-56791158	GM12878	blood:	n/a	chrX:56790419-56790428 chrX:56790418-56790427 chrX:56790930-56790939 chrX:56790789-56790802
48	BCLAF1	chrX:56809929-56810339	GM12878	blood:	n/a	chrX:56810049-56810058
49	BHLHE40	chrX:56815470-56815578	GM12878	blood:	n/a	n/a
50	BHLHE40	chrX:56791001-56791122	K562	blood:	n/a	n/a

(count:1283 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chrX:56589951-56590001	HNPCEpiC	eye:	n/a
2	chrX:56590513-56590563	AG04449	skin:	fetal
3	chrX:56589951-56590001	HNPCEpiC	eye:	n/a
4	chrX:56590513-56590563	AG04449	skin:	fetal
5	chrX:56590537-56590587	Caco-2	colon:	n/a
6	chrX:56310955-56311005	GM06990	blood:	n/a
7	chrX:56589946-56589996	NB4	blood:	n/a
8	chrX:56589951-56590001	HUVEC	blood vessel:	n/a
9	chrX:56589792-56589842	MCF-7	breast:	n/a
10	chrX:56590537-56590587	HCM	heart:	n/a
11	chrX:56756686-56756736	HL-60	blood:	n/a
12	chrX:56755714-56755764	AoSMC	blood vessel:	n/a
13	chrX:56589792-56589842	ovcar-3	ovarian:	n/a
14	chrX:56586577-56586627	HNPCEpiC	eye:	n/a
15	chrX:56586577-56586627	NT2-D1	testis:	n/a
16	chrX:56754534-56754584	H1-hESC	embryonic stem cell:	embryo
17	chrX:56589918-56589968	MCF-7	breast:	n/a
18	chrX:56589768-56589818	NT2-D1	testis:	n/a
19	chrX:56590113-56590163	HepG2	liver:	n/a
20	chrX:56590113-56590163	HAEpiC	amniotic membrane:	n/a
21	chrX:56590513-56590563	AoSMC	blood vessel:	n/a
22	chrX:56590386-56590436	HUVEC	blood vessel:	n/a
23	chrX:56754534-56754584	PFSK-1	brain:	n/a
24	chrX:56590537-56590587	IMR90	lung:	fetal
25	chrX:56586577-56586627	ovcar-3	ovarian:	n/a
26	chrX:56764796-56764846	GM19239	blood:	n/a
27	chrX:56310955-56311005	HCM	heart:	n/a
28	chrX:56589949-56589999	Hela-S3	cervix:	n/a
29	chrX:56590187-56590237	HRE	kidney:	n/a
30	chrX:56764293-56764343	PFSK-1	brain:	n/a
31	chrX:56589768-56589818	SK-N-MC	brain:	n/a
32	chrX:56586577-56586627	SKMC	muscle:	n/a
33	chrX:56755717-56755767	HL-60	blood:	n/a
34	chrX:56310955-56311005	IMR90	lung:	fetal
35	chrX:56590113-56590163	GM06990	blood:	n/a
36	chrX:56589946-56589996	H1-hESC	embryonic stem cell:	embryo
37	chrX:56589951-56590001	AG04450	lung:	fetal
38	chrX:56589949-56589999	SK-N-SH	brain:	n/a
39	chrX:56590513-56590563	ECC-1	luminal epithelium:	n/a
40	chrX:56310955-56311005	ProgFib	skin:	n/a
41	chrX:56756686-56756736	Caco-2	colon:	n/a
42	chrX:56310955-56311005	NB4	blood:	n/a
43	chrX:56589918-56589968	H1-hESC	embryonic stem cell:	embryo
44	chrX:56590113-56590163	HRCEpiC	kidney:	n/a
45	chrX:56589918-56589968	AG04450	lung:	fetal
46	chrX:56756686-56756736	NH-A	brain:	n/a
47	chrX:56589951-56590001	GM06990	blood:	n/a
48	chrX:56590513-56590563	HUVEC	blood vessel:	n/a
49	chrX:56755714-56755764	HUVEC	blood vessel:	n/a
50	chrX:56589768-56589818	T-47D	breast:	n/a

(count:62 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chrX:56790021..56792634-chrX:56811164..56813731,2	MCF-7	breast:
2	chrX:56309340..56311634-chrX:56589348..56591185,2	MCF-7	breast:
3	chrX:56307984..56308796-chrX:56488568..56489439,3	MCF-7	breast:
4	chrX:56589676..56592038-chrX:56599378..56602189,2	MCF-7	breast:
5	chrX:56583300..56586802-chrX:56587902..56592521,5	K562	blood:
6	chrX:56820104..56822444-chrX:56825427..56828204,2	MCF-7	breast:
7	chrX:56307984..56308796-chrX:56488568..56489439,3	MCF-7	breast:
8	chrX:56790522..56791427-chrX:57004320..57005681,3	MCF-7	breast:
9	chrX:56815042..56815858-chrX:57555231..57555778,2	MCF-7	breast:
10	chrX:56560010..56562165-chrX:56589519..56591706,2	K562	blood:
11	chrX:56815404..56816431-chrX:57001867..57002525,3	MCF-7	breast:
12	chrX:56784028..56786662-chrX:56837898..56840696,2	MCF-7	breast:
13	chrX:56581292..56583296-chrX:56585105..56587340,2	K562	blood:
14	chrX:56814414..56817142-chrX:56827213..56829946,2	MCF-7	breast:
15	chrX:56815042..56815706-chrX:57004646..57005228,2	MCF-7	breast:
16	chrX:56580407..56582140-chrX:56590600..56592126,2	K562	blood:
17	chrX:56472581..56475344-chrX:56478387..56480442,2	K562	blood:
18	chrX:56308361..56308892-chrX:56752872..56753378,2	K562	blood:
19	chrX:56583895..56586731-chrX:56587526..56591392,3	K562	blood:
20	chrX:56589521..56592004-chrX:56754888..56757482,3	MCF-7	breast:
21	chrX:56308372..56311065-chrX:56311411..56313857,2	MCF-7	breast:
22	chrX:56595142..56598529-chrX:56599430..56604121,4	K562	blood:
23	chrX:56790542..56791292-chrX:57182607..57183519,2	MCF-7	breast:
24	chrX:56302749..56305060-chrX:56754040..56756022,2	MCF-7	breast:
25	chrX:56581288..56583917-chrX:56588931..56591229,2	MCF-7	breast:
26	chrX:56308372..56311065-chrX:56311411..56313857,2	MCF-7	breast:
27	chrX:56754417..56757216-chrX:56757629..56759617,2	MCF-7	breast:
28	chrX:56582792..56586142-chrX:56588656..56592207,5	MCF-7	breast:
29	chrX:56308361..56308892-chrX:56752872..56753378,2	K562	blood:
30	chrX:56472581..56475344-chrX:56478387..56480442,2	K562	blood:
31	chr16:3313684..3314490-chrX:56589920..56590436,2	Hela-S3	cervix:
32	chrX:56816463..56818432-chrX:56827430..56829351,2	MCF-7	breast:
33	chrX:56581292..56583296-chrX:56585105..56587340,2	K562	blood:
34	chrX:56790745..56791532-chrX:57002195..57003144,2	K562	blood:
35	chrX:56790021..56792634-chrX:56811164..56813731,2	MCF-7	breast:
36	chrX:56755952..56758658-chrX:56787740..56790221,2	MCF-7	breast:
37	chrX:56806832..56808536-chrX:56810379..56813330,2	MCF-7	breast:
38	chrX:56809606..56814418-chrX:56815131..56818953,4	MCF-7	breast:
39	chrX:55743259..55745403-chrX:56589658..56591573,2	MCF-7	breast:
40	chrX:56581297..56583296-chrX:56585127..56587340,2	K562	blood:
41	chrX:56581297..56583296-chrX:56585127..56587340,2	K562	blood:
42	chrX:56488558..56489404-chrX:56753028..56753703,4	MCF-7	breast:
43	chrX:56809606..56814418-chrX:56815131..56818953,4	MCF-7	breast:
44	chrX:56755952..56758658-chrX:56787740..56790221,2	MCF-7	breast:
45	chrX:56816736..56818611-chrX:56825316..56827137,2	MCF-7	breast:
46	chr11:93474405..93474909-chrX:56589618..56590518,2	Hela-S3	cervix:
47	chrX:56488558..56489404-chrX:56753028..56753703,4	MCF-7	breast:
48	chr9:128508522..128509472-chrX:56589807..56590542,2	Hela-S3	cervix:
49	chrX:56806832..56808536-chrX:56810379..56813330,2	MCF-7	breast:
50	chrX:56820591..56822827-chrX:56824334..56826679,2	MCF-7	breast:

(count:25 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SPIN3-2	chrX:56823800-56824231	NONHSAT137277
2	lnc-KLF8-1	chrX:56316470-56317510	XLOC_007993
3	lnc-SPIN3-3	chrX:56789313-56789333	NONHSAT137276
4	lnc-SPIN3-4	chrX:56763221-56764017	NR_002308
5	lnc-SPIN3-2	chrX:56808673-56808686	NONHSAT137277
6	lnc-UBQLN2-1	chrX:56644824-56644946	ENSG00000230105
7	lnc-UBQLN2-1	chrX:56650302-56650891	ENSG00000230105
8	lnc-UBQLN2-5	chrX:56760584-56761001	NONHSAT137274
9	lnc-UBQLN2-7	chrX:56772443-56772747	ucscGeneNc_uc004dut_2
10	lnc-SPIN3-2	chrX:56808145-56808617	NONHSAT137277
11	lnc-KLF8-2	chrX:56312985-56315265	NONHSAT137266
12	lnc-KLF8-1	chrX:56325676-56325981	XLOC_007993
13	lnc-SPIN3-3	chrX:56790854-56790965	NONHSAT137276
14	lnc-SPIN3-5	chrX:56311188-56311820	NONHSAT137265
15	lnc-UBQLN2-7	chrX:56775221-56775357	ucscGeneNc_uc004dut_2
16	lnc-UBQLN2-4	chrX:56759851-56760504	NONHSAT137273
17	lnc-SPIN3-3	chrX:56788470-56788737	NONHSAT137276
18	lnc-SPIN3-3	chrX:56778876-56779216	NONHSAT137276
19	lnc-UBQLN2-3	chrX:56667027-56667616	NONHSAT137269
20	lnc-KLF8-3	chrX:56333922-56334235	l_3919_chrX:56333921-56342490_thyroid
21	lnc-KLF8-3	chrX:56342401-56342490	l_3919_chrX:56333921-56342490_thyroid
22	lnc-UBQLN2-3	chrX:56661549-56661671	NONHSAT137269
23	lnc-SPIN3-5	chrX:56312110-56312246	NONHSAT137265
24	lnc-SPIN3-2	chrX:56815479-56815983	NONHSAT137277
25	lnc-UBQLN2-6	chrX:56762139-56762989	NONHSAT137275

No data

(count:2 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	UBQLN2	hsa-miR-155-5p	chrX:56593242-56593263
2	UBQLN2	hsa-miR-155-5p	chrX:56593322-56593344

Variant related genes	Relation type
UBQLN2	TF binding region
UQCRBP1	TF binding region
ENSG00000204272	TF binding region
ENSG00000230105	TF binding region
UBQLN2	CpG island
UQCRBP1	CpG island
ENSG00000204272	CpG island
ENSG00000230105	CpG island
ENSG00000100796	chromatin interactions
ENSG00000157483	chromatin interactions
ENSG00000229582	chromatin interactions
ENSG00000166012	chromatin interactions
ENSG00000182919	chromatin interactions
ENSG00000157470	chromatin interactions
ENSG00000006194	chromatin interactions
ENSG00000188021	chromatin interactions
ENSG00000204272	chromatin interactions
ENSG00000083750	chromatin interactions

Extended variants
information (count: 5075 )
Associated
traits (count: 49 )

Variant overlapped rSNPs/rCNVs (count:5075 , 50 per page) page: 1 2 3 4 5 6 7 ... 102

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs5960155	chrX:56292362-56292363	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs113764519	chrX:56292434-56292435	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs190873682	chrX:56292464-56292465	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs45560443	chrX:56292574-56292575	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs182008395	chrX:56292698-56292699	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs6521376	chrX:56292912-56292913	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
7	rs368843554	chrX:56293152-56293153	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs34011128	chrX:56293205-56293206	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs561448776	chrX:56293556-56293557	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs553636590	chrX:56293635-56293636	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs5960672	chrX:56293700-56293701	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs113948973	chrX:56293726-56293727	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs187214626	chrX:56293829-56293830	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs79957793	chrX:56293958-56293959	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs112588903	chrX:56293977-56293978	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs368832817	chrX:56294083-56294084	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs73206586	chrX:56294220-56294221	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs191641919	chrX:56294227-56294228	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs146172520	chrX:56294404-56294405	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs201274074	chrX:56294598-56294599	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs183529009	chrX:56294811-56294812	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs139101078	chrX:56294858-56294859	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs188130021	chrX:56294998-56294999	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs190385697	chrX:56295000-56295001	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs35628360	chrX:56295064-56295065	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs3747284	chrX:56295245-56295246	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
27	rs573472409	chrX:56295249-56295250	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs182195345	chrX:56295309-56295310	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs59394346	chrX:56295439-56295440	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs10584898	chrX:56295440-56295441	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs377254816	chrX:56295625-56295626	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs186978672	chrX:56295720-56295721	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs377540198	chrX:56295777-56295778	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs200006019	chrX:56295832-56295833	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs370185272	chrX:56295857-56295858	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs145056308	chrX:56295867-56295868	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs142294522	chrX:56295904-56295905	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs113212607	chrX:56295958-56295959	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs200952140	chrX:56295959-56295960	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs200400193	chrX:56295960-56295961	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs548460356	chrX:56295961-56295962	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs377486704	chrX:56295965-56295966	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs540830099	chrX:56295975-56295976	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs35519867	chrX:56295978-56295979	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs58650166	chrX:56295980-56295981	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs112856172	chrX:56296035-56296036	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs151128605	chrX:56296265-56296266	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs12862304	chrX:56296488-56296489	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs149834786	chrX:56296511-56296512	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs370649966	chrX:56296607-56296608	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:49)

Disease	PMID	Source
Cancer	21637783	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Cancer	16751803	CNVD
Intellectual disability	23615299	CNVD
Neuroblastoma	18923191	CNVD
Burkitt''s lymphoma	20823134	CNVD
Astrocytoma	17387387	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	21979893	CNVD
Schizophrenia	23904455	CNVD
Olfactory neuroblastoma	18408657	CNVD
infertile	22614455	CNVD
Acute myeloid leukemia	20729466	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Glioblastoma multiforme	22286061	CNVD
Acute myeloid leukemia	21251322	CNVD
Cancer	20581869	CNVD
Multiple myeloma	20724749	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Cancer	20164919	CNVD
Premature ovarian failure	20952765	CNVD
Thyroid cancer	19087340	CNVD
lymphocytic leukemia	21291569	CNVD
Cervical cancer	21062161	CNVD
Follicular lymphoma	20505157	CNVD
primary effusion lymphomas	17116491	CNVD
Testicular germ cell tumor	18059402	CNVD
Testicular cancer	18059402	CNVD
Seminomas	18059402	CNVD
Breast cancer	21785460	CNVD
Ovarian cancer	19835627	CNVD
Mental retardation	21735175	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	17952125	CNVD
Mental retardation	20877625	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Alcoholism	21790672	CNVD

Chromatin state (count:3200 , 50 per page) page: 1 2 3 4 5 6 7 ... 64

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chrX:56259800-56316200	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chrX:56269400-56320200	Weak transcription	Brain Germinal Matrix	brain
3	chrX:56275000-56305400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chrX:56275000-56316200	Weak transcription	Colon Smooth Muscle	Colon
5	chrX:56275400-56296000	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chrX:56279200-56310800	Weak transcription	Aorta	Aorta
7	chrX:56279400-56316800	Weak transcription	Placenta Amnion	Placenta Amnion
8	chrX:56280400-56320000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chrX:56286000-56336600	Weak transcription	Left Ventricle	heart
10	chrX:56287400-56294200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
11	chrX:56288800-56295800	Weak transcription	Stomach Smooth Muscle	stomach
12	chrX:56289600-56305600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chrX:56290000-56293400	Weak transcription	Spleen	Spleen
14	chrX:56290200-56298400	Weak transcription	Rectal Smooth Muscle	rectum
15	chrX:56290200-56299400	Weak transcription	H1 Cell Line	embryonic stem cell
16	chrX:56290200-56314400	Weak transcription	Fetal Intestine Small	intestine
17	chrX:56290400-56296000	Weak transcription	HUES64 Cell Line	embryonic stem cell
18	chrX:56290600-56293200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chrX:56290800-56293000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
20	chrX:56290800-56293200	Weak transcription	Fetal Intestine Large	intestine
21	chrX:56290800-56297600	Weak transcription	Fetal Brain Female	brain
22	chrX:56291000-56312400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chrX:56291200-56292400	Enhancers	HUVEC	blood vessel
24	chrX:56291600-56292400	Strong transcription	Primary B cells from peripheral blood	blood
25	chrX:56291800-56292400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
26	chrX:56291800-56292400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chrX:56291800-56292400	Strong transcription	Adipose Nuclei	Adipose
28	chrX:56291800-56292800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
29	chrX:56292200-56295200	Weak transcription	Esophagus	oesophagus
30	chrX:56292200-56295800	Weak transcription	Ovary	ovary
31	chrX:56292200-56297200	Weak transcription	Lung	lung
32	chrX:56292200-56302200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chrX:56292200-56304000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chrX:56292200-56310800	Weak transcription	Fetal Stomach	stomach
35	chrX:56292400-56295200	Weak transcription	Adipose Nuclei	Adipose
36	chrX:56292400-56295400	Weak transcription	Primary B cells from peripheral blood	blood
37	chrX:56292400-56296000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chrX:56292400-56310600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
39	chrX:56292800-56299400	Weak transcription	HUES6 Cell Line	embryonic stem cell
40	chrX:56293400-56296600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
41	chrX:56295200-56296200	Strong transcription	Esophagus	oesophagus
42	chrX:56295200-56299200	Strong transcription	Adipose Nuclei	Adipose
43	chrX:56295400-56295600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
44	chrX:56295400-56295600	Enhancers	HMEC	breast
45	chrX:56295400-56297400	Strong transcription	Primary B cells from peripheral blood	blood
46	chrX:56295600-56297600	Weak transcription	HMEC	breast
47	chrX:56295600-56298600	Weak transcription	Placenta	Placenta
48	chrX:56295800-56296000	Strong transcription	Ovary	ovary
49	chrX:56295800-56297200	Strong transcription	Stomach Smooth Muscle	stomach
50	chrX:56295800-56297400	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast

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