Variant report

Variant	esv2757350
Chromosome Location	chr9:115371397-115594108
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3536)
CpG islands
(count:854)
Chromatin interactive
region (count:244)
LncRNA
region (count:11)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3536 , 50 per page) page: 1 2 3 4 5 6 7 ... 71

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:115526787-115526979	K562	blood:	n/a	n/a
2	ARID3A	chr9:115494056-115494755	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:115512832-115512868	K562	blood:	n/a	n/a
4	ARID3A	chr9:115527085-115527557	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:115512431-115512988	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:115480237-115480501	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:115480303-115480518	K562	blood:	n/a	n/a
8	ARID3A	chr9:115509251-115509790	HepG2	liver:	n/a	n/a
9	ARID3A	chr9:115479963-115479990	K562	blood:	n/a	n/a
10	ARID3A	chr9:115480786-115481091	HepG2	liver:	n/a	n/a
11	ATF1	chr9:115479899-115480664	K562	blood:	n/a	n/a
12	ATF1	chr9:115492920-115493063	K562	blood:	n/a	n/a
13	ATF1	chr9:115546849-115547018	K562	blood:	n/a	n/a
14	ATF1	chr9:115376140-115376239	K562	blood:	n/a	n/a
15	ATF2	chr9:115571491-115572271	GM12878	blood:	n/a	n/a
16	ATF2	chr9:115546557-115547024	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr9:115536387-115537342	GM12878	blood:	n/a	n/a
18	ATF2	chr9:115479964-115480574	H1-hESC	embryonic stem cell:	n/a	n/a
19	ATF2	chr9:115533877-115534620	GM12878	blood:	n/a	n/a
20	ATF2	chr9:115571553-115572322	GM12878	blood:	n/a	n/a
21	ATF2	chr9:115461429-115461926	GM12878	blood:	n/a	n/a
22	ATF2	chr9:115479969-115480608	GM12878	blood:	n/a	n/a
23	ATF2	chr9:115461473-115461858	GM12878	blood:	n/a	n/a
24	ATF2	chr9:115534041-115534389	GM12878	blood:	n/a	n/a
25	ATF2	chr9:115546485-115546980	H1-hESC	embryonic stem cell:	n/a	n/a
26	ATF2	chr9:115480059-115480571	H1-hESC	embryonic stem cell:	n/a	n/a
27	ATF3	chr9:115512764-115513021	K562	blood:	n/a	n/a
28	ATF3	chr9:115513811-115514038	K562	blood:	n/a	chr9:115513959-115513968
29	BACH1	chr9:115480800-115481000	H1-hESC	embryonic stem cell:	n/a	n/a
30	BACH1	chr9:115383915-115383962	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr9:115555648-115555803	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr9:115513425-115513999	H1-hESC	embryonic stem cell:	n/a	n/a
33	BACH1	chr9:115391691-115391696	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr9:115480689-115480847	K562	blood:	n/a	n/a
35	BATF	chr9:115571549-115572196	GM12878	blood:	n/a	chr9:115571860-115571871
36	BATF	chr9:115477441-115477621	GM12878	blood:	n/a	n/a
37	BATF	chr9:115477422-115477655	GM12878	blood:	n/a	n/a
38	BATF	chr9:115481521-115481962	GM12878	blood:	n/a	n/a
39	BATF	chr9:115555592-115555842	GM12878	blood:	n/a	n/a
40	BATF	chr9:115571596-115572164	GM12878	blood:	n/a	chr9:115571860-115571871
41	BATF	chr9:115481594-115481937	GM12878	blood:	n/a	n/a
42	BATF	chr9:115450305-115450695	GM12878	blood:	n/a	chr9:115450534-115450545 chr9:115450535-115450545
43	BCL11A	chr9:115571502-115572209	GM12878	blood:	n/a	n/a
44	BCL11A	chr9:115571550-115572162	GM12878	blood:	n/a	n/a
45	BCL3	chr9:115461526-115461832	GM12878	blood:	n/a	n/a
46	BCL3	chr9:115571588-115572096	GM12878	blood:	n/a	n/a
47	BCLAF1	chr9:115555367-115555922	GM12878	blood:	n/a	n/a
48	BCLAF1	chr9:115461422-115462143	GM12878	blood:	n/a	n/a
49	BCLAF1	chr9:115536629-115537207	GM12878	blood:	n/a	n/a
50	BCLAF1	chr9:115512540-115513253	GM12878	blood:	n/a	chr9:115513227-115513236 chr9:115513036-115513049 chr9:115513132-115513145

(count:854 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:115512612-115512662	PFSK-1	brain:	n/a
2	chr9:115480625-115480675	MCF-7	breast:	n/a
3	chr9:115512612-115512662	SK-N-SH	brain:	n/a
4	chr9:115513525-115513575	HPAEpiC	pulmonary alveolar:	n/a
5	chr9:115513820-115513870	CMK	blood:	n/a
6	chr9:115480539-115480589	SK-N-MC	brain:	n/a
7	chr9:115509770-115509820	IMR90	lung:	fetal
8	chr9:115480630-115480680	NHDF-neo	bronchial:	n/a
9	chr9:115480625-115480675	Caco-2	colon:	n/a
10	chr9:115509770-115509820	SAEC	small airway:	n/a
11	chr9:115513482-115513532	ECC-1	luminal epithelium:	n/a
12	chr9:115480630-115480680	MCF-7	breast:	n/a
13	chr9:115513482-115513532	AG04449	skin:	fetal
14	chr9:115512530-115512580	PrEC	prostate:	n/a
15	chr9:115513056-115513106	SAEC	small airway:	n/a
16	chr9:115480539-115480589	HCM	heart:	n/a
17	chr9:115512530-115512580	NH-A	brain:	n/a
18	chr9:115513820-115513870	HRCEpiC	kidney:	n/a
19	chr9:115513820-115513870	Caco-2	colon:	n/a
20	chr9:115512612-115512662	HMEC	breast:	n/a
21	chr9:115480625-115480675	SKMC	muscle:	n/a
22	chr9:115480060-115480110	CMK	blood:	n/a
23	chr9:115513820-115513870	GM12892	blood:	n/a
24	chr9:115481039-115481089	HEEpiC	esophagus:	n/a
25	chr9:115480324-115480374	SK-N-MC	brain:	n/a
26	chr9:115513525-115513575	AG09319	gingival:	n/a
27	chr9:115480539-115480589	Hepatocyte	liver:	n/a
28	chr9:115481039-115481089	SK-N-SH	brain:	n/a
29	chr9:115480630-115480680	HL-60	blood:	n/a
30	chr9:115481039-115481089	AG04450	lung:	fetal
31	chr9:115481039-115481089	HRPEpiC	eye:	n/a
32	chr9:115480539-115480589	Hela-S3	cervix:	n/a
33	chr9:115513525-115513575	H1-hESC	embryonic stem cell:	embryo
34	chr9:115513525-115513575	AG10803	skin:	n/a
35	chr9:115480060-115480110	PrEC	prostate:	n/a
36	chr9:115480060-115480110	AG09309	skin:	n/a
37	chr9:115480324-115480374	HRPEpiC	eye:	n/a
38	chr9:115480625-115480675	AG04450	lung:	fetal
39	chr9:115480630-115480680	ProgFib	skin:	n/a
40	chr9:115512530-115512580	AG04449	skin:	fetal
41	chr9:115513482-115513532	BE2_C	brain:	n/a
42	chr9:115509770-115509820	BJ	skin:	n/a
43	chr9:115480060-115480110	AoSMC	blood vessel:	n/a
44	chr9:115481039-115481089	HepG2	liver:	n/a
45	chr9:115512612-115512662	Jurkat	blood:	n/a
46	chr9:115509770-115509820	Caco-2	colon:	n/a
47	chr9:115480324-115480374	SKMC	muscle:	n/a
48	chr9:115480625-115480675	ProgFib	skin:	n/a
49	chr9:115480324-115480374	HL-60	blood:	n/a
50	chr9:115509770-115509820	HIPEpiC	eye:	n/a

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr9:115205537..115206125-chr9:115473120..115473635,2	MCF-7	breast:
2	chr9:115205105..115205795-chr9:115467855..115468653,2	MCF-7	breast:
3	chr9:115511729..115513827-chr9:115524619..115527032,2	K562	blood:
4	chr9:115425694..115427398-chr9:115429129..115432033,2	K562	blood:
5	chr9:115469893..115474595-chr9:115477865..115481972,7	K562	blood:
6	chr9:115141212..115144123-chr9:115478638..115480547,2	MCF-7	breast:
7	chr9:115512422..115514539-chr9:115533926..115536411,4	MCF-7	breast:
8	chr9:115383838..115387286-chr9:115392608..115396534,4	K562	blood:
9	chr9:115555506..115558401-chr9:115567192..115568729,2	MCF-7	breast:
10	chr9:115512086..115513984-chr9:115541004..115543980,2	MCF-7	breast:
11	chr1:160651034..160651578-chr9:115581816..115582408,2	K562	blood:
12	chr9:115554429..115557322-chr9:115571170..115574854,4	MCF-7	breast:
13	chr9:114849487..114850237-chr9:115427590..115428335,2	MCF-7	breast:
14	chr9:115369992..115372791-chr9:115372880..115374738,2	K562	blood:
15	chr9:115247539..115250274-chr9:115478530..115480518,2	K562	blood:
16	chr9:115554429..115557322-chr9:115571170..115574854,4	MCF-7	breast:
17	chr9:115542323..115543892-chr9:115545474..115547035,2	K562	blood:
18	chr9:115511487..115514115-chr9:115544583..115546972,6	MCF-7	breast:
19	chr9:115457896..115460451-chr9:115510686..115513121,2	K562	blood:
20	chr9:115473082..115474008-chr9:115511306..115512239,2	K562	blood:
21	chr9:115401662..115403762-chr9:115408579..115410766,2	K562	blood:
22	chr9:115488383..115489985-chr9:115491570..115493098,2	K562	blood:
23	chr9:115510510..115513505-chr9:115582218..115583904,2	K562	blood:
24	chr9:115371233..115374134-chr9:115375827..115377994,2	K562	blood:
25	chr9:115141294..115143958-chr9:115519070..115521567,2	K562	blood:
26	chr3:47822834..47823428-chr9:115479877..115480684,2	Hela-S3	cervix:
27	chr9:115421830..115423698-chr9:115425235..115427164,2	K562	blood:
28	chr9:115537609..115539652-chr9:115540859..115543192,2	K562	blood:
29	chr9:115545740..115547705-chr9:115549522..115552424,3	K562	blood:
30	chr9:115555053..115556635-chr9:115557312..115560299,2	MCF-7	breast:
31	chr9:115566993..115569306-chr9:115570718..115573402,2	K562	blood:
32	chr9:115509754..115512033-chr9:115512589..115514776,2	MCF-7	breast:
33	chr9:115512683..115513666-chr9:115555193..115556149,4	MCF-7	breast:
34	chr9:115447768..115450470-chr9:115455814..115458350,2	MCF-7	breast:
35	chr9:115374076..115376330-chr9:115394723..115396428,2	K562	blood:
36	chr9:115421290..115425519-chr9:115428023..115431613,4	K562	blood:
37	chr9:115512316..115514216-chr9:115529153..115530836,3	MCF-7	breast:
38	chr9:115439423..115442262-chr9:115442382..115444578,2	MCF-7	breast:
39	chr9:115503663..115506191-chr9:115515083..115517470,2	K562	blood:
40	chr9:115565373..115568100-chr9:115582412..115584863,2	MCF-7	breast:
41	chr9:115425089..115427194-chr9:115429213..115432033,2	K562	blood:
42	chr9:115235092..115237289-chr9:115391747..115394330,2	K562	blood:
43	chr9:115494981..115496599-chr9:115509076..115511385,2	MCF-7	breast:
44	chr9:115401662..115403762-chr9:115408579..115410766,2	K562	blood:
45	chr9:115374076..115376330-chr9:115394723..115396428,2	K562	blood:
46	chr9:115505276..115505895-chr9:115555411..115556004,2	MCF-7	breast:
47	chr9:115568138..115570765-chr9:115571944..115575616,3	MCF-7	breast:
48	chr9:115496362..115497969-chr9:115509483..115511853,2	K562	blood:
49	chr9:115465064..115467730-chr9:115468816..115472137,3	K562	blood:
50	chr9:115431402..115433363-chr9:115441682..115443542,2	K562	blood:

(count:11 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KIAA1958-1	chr9:115453057-115453265	NONHSAT134022
2	lnc-SLC46A2-4	chr9:115456314-115456513	NONHSAT134023
3	lnc-C9orf80-1	chr9:115512686-115512736	XLOC_007830
4	lnc-KIAA1958-1	chr9:115484007-115484956	NONHSAT134022
5	lnc-KIAA1958-1	chr9:115454118-115454181	NONHSAT134022
6	lnc-C9orf80-1	chr9:115511182-115511550	XLOC_007830
7	lnc-SLC46A2-4	chr9:115480267-115480397	NONHSAT134023
8	lnc-SNX30-2	chr9:115390750-115391983	NONHSAT134020
9	lnc-C9orf80-1	chr9:115511360-115512795	XLOC_007830
10	lnc-C9orf80-1	chr9:115505051-115505514	XLOC_007830
11	lnc-SLC46A2-4	chr9:115478741-115478821	NONHSAT134023

No data

Variant related genes	Relation type
ENSG00000226609	TF binding region
INIP	TF binding region
SNX30	TF binding region
ENSG00000226609	CpG island
INIP	CpG island
SNX30	CpG island
ENSG00000165185	chromatin interactions
ENSG00000049239	chromatin interactions
ENSG00000148158	chromatin interactions
ENSG00000110925	chromatin interactions
ENSG00000148153	chromatin interactions
ENSG00000230185	chromatin interactions
ENSG00000119314	chromatin interactions
ENSG00000119471	chromatin interactions
ENSG00000101144	chromatin interactions
ENSG00000271631	chromatin interactions
ENSG00000226609	chromatin interactions
ENSG00000010165	chromatin interactions
ENSG00000150760	chromatin interactions
ENSG00000173473	chromatin interactions
SETD8	miRNA target sites

Extended variants
information (count: 8151 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:8151 , 50 per page) page: 1 2 3 4 5 6 7 ... 164

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2676629	chr9:115371397-115371398	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs190557592	chr9:115371403-115371404	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs539600029	chr9:115371414-115371415	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs182175523	chr9:115371538-115371539	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs576573862	chr9:115371599-115371600	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs375605814	chr9:115371600-115371601	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs78676822	chr9:115371602-115371603	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs113140016	chr9:115371652-115371653	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs572689236	chr9:115371790-115371791	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs138360328	chr9:115371862-115371863	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs565871192	chr9:115371978-115371979	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs149272754	chr9:115371996-115371997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs532828012	chr9:115372231-115372232	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs144520636	chr9:115372248-115372249	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs546871146	chr9:115372330-115372331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs556178019	chr9:115372413-115372414	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs531283938	chr9:115372418-115372419	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs57485803	chr9:115372552-115372553	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
19	rs561715978	chr9:115372561-115372562	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs527635226	chr9:115372585-115372586	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs186850845	chr9:115372603-115372604	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs569706886	chr9:115372665-115372666	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs533246458	chr9:115372670-115372671	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs142183358	chr9:115372673-115372674	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs190501927	chr9:115372698-115372699	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs539661894	chr9:115372764-115372765	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs182386778	chr9:115372770-115372771	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs185432721	chr9:115372801-115372802	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs114522087	chr9:115372853-115372854	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs190291768	chr9:115372862-115372863	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs146357478	chr9:115372863-115372864	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs374001382	chr9:115372869-115372870	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs182738340	chr9:115372877-115372878	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs551823867	chr9:115372880-115372881	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs139769461	chr9:115372923-115372924	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs566659364	chr9:115372937-115372938	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs144468877	chr9:115372980-115372981	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs187710833	chr9:115372986-115372987	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs543636010	chr9:115373029-115373030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs151038756	chr9:115373042-115373043	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs575773892	chr9:115373044-115373045	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs375706619	chr9:115373139-115373140	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs139667089	chr9:115373156-115373157	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs62575196	chr9:115373197-115373198	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs540638453	chr9:115373223-115373224	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs567561650	chr9:115373278-115373279	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs193220537	chr9:115373298-115373299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs533245197	chr9:115373316-115373317	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs550038897	chr9:115373343-115373344	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs183975563	chr9:115373348-115373349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
small cell lung cancer	20016488	CNVD
Cardiac fibroma	18329553	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Testicular germ cell tumor	18059402	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Lung cancer	19147751	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	22522925	CNVD
Melanoma	20877625	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:5146 , 50 per page) page: 1 2 3 4 5 6 7 ... 103

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:115337600-115380200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr9:115337800-115377800	Weak transcription	Dnd41	blood
3	chr9:115338400-115379800	Weak transcription	Primary B cells from cord blood	blood
4	chr9:115344400-115380200	Weak transcription	Gastric	stomach
5	chr9:115346400-115385000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr9:115346800-115377800	Weak transcription	HepG2	liver
7	chr9:115358200-115380000	Weak transcription	Sigmoid Colon	Sigmoid Colon
8	chr9:115359800-115380400	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr9:115360600-115379000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr9:115361400-115380200	Weak transcription	Fetal Intestine Small	intestine
11	chr9:115364000-115379800	Weak transcription	Ovary	ovary
12	chr9:115364000-115380200	Weak transcription	Aorta	Aorta
13	chr9:115365200-115380200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr9:115366000-115380200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr9:115368600-115391600	Weak transcription	Brain Hippocampus Middle	brain
16	chr9:115369200-115380200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
17	chr9:115370400-115380000	Weak transcription	Fetal Intestine Large	intestine
18	chr9:115370400-115380200	Weak transcription	Fetal Muscle Trunk	muscle
19	chr9:115370800-115371400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr9:115371400-115379000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr9:115373800-115380200	Weak transcription	Primary hematopoietic stem cells	blood
22	chr9:115374600-115382200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
23	chr9:115375000-115380200	Weak transcription	Thymus	Thymus
24	chr9:115375200-115380200	Weak transcription	Pancreas	Pancrea
25	chr9:115375600-115380200	Weak transcription	Fetal Muscle Leg	muscle
26	chr9:115375600-115380600	Weak transcription	Left Ventricle	heart
27	chr9:115375600-115380800	Weak transcription	H1 Cell Line	embryonic stem cell
28	chr9:115375800-115376000	Weak transcription	Fetal Lung	lung
29	chr9:115376000-115376200	ZNF genes & repeats	Fetal Lung	lung
30	chr9:115376200-115379800	Weak transcription	Fetal Lung	lung
31	chr9:115376600-115380000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr9:115376800-115377000	Weak transcription	Right Atrium	heart
33	chr9:115377000-115377200	Enhancers	Right Atrium	heart
34	chr9:115377200-115381400	Weak transcription	Right Atrium	heart
35	chr9:115377800-115378000	Enhancers	GM12878-XiMat	blood
36	chr9:115377800-115378200	Enhancers	HUES64 Cell Line	embryonic stem cell
37	chr9:115377800-115378200	Enhancers	Dnd41	blood
38	chr9:115377800-115378400	Enhancers	HepG2	liver
39	chr9:115377800-115380200	Weak transcription	K562	blood
40	chr9:115378000-115378200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr9:115378000-115378200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
42	chr9:115378000-115378400	Enhancers	Primary T helper cells PMA-I stimulated	--
43	chr9:115378000-115378600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
44	chr9:115378000-115379800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
45	chr9:115378000-115380000	Weak transcription	Primary T cells from cord blood	blood
46	chr9:115378000-115383400	Weak transcription	GM12878-XiMat	blood
47	chr9:115378200-115378400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr9:115378200-115378400	Enhancers	Fetal Stomach	stomach
49	chr9:115378200-115378400	Enhancers	A549	lung
50	chr9:115378200-115379400	Weak transcription	Dnd41	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links