Variant report

Variant	esv2757444
Chromosome Location	chr11:50171877-50449192
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:375)
CpG islands
(count:2321)
Chromatin interactive
region (count:3)
LncRNA
region (count:47)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:375 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr11:50257555-50257921	K562	blood:	n/a	n/a
2	ATF1	chr11:50381201-50381204	K562	blood:	n/a	n/a
3	ATF1	chr11:50409411-50409611	K562	blood:	n/a	n/a
4	ATF3	chr11:50257564-50257818	K562	blood:	n/a	chr11:50257726-50257746 chr11:50257724-50257737 chr11:50257584-50257592 chr11:50257723-50257738 chr11:50257725-50257736
5	BATF	chr11:50251866-50252053	GM12878	blood:	n/a	n/a
6	BHLHE40	chr11:50257408-50257634	K562	blood:	n/a	chr11:50257599-50257615
7	CCNT2	chr11:50257299-50257888	K562	blood:	n/a	n/a
8	CEBPB	chr11:50233638-50233794	HepG2	liver:	n/a	n/a
9	CEBPB	chr11:50185206-50185319	A549	lung:	n/a	chr11:50185257-50185274 chr11:50185258-50185271 chr11:50185259-50185270 chr11:50185258-50185269
10	CEBPB	chr11:50182673-50182737	HepG2	liver:	n/a	chr11:50182687-50182698
11	CEBPB	chr11:50409463-50409610	H1-hESC	embryonic stem cell:	n/a	n/a
12	CEBPB	chr11:50185114-50185392	HepG2	liver:	n/a	chr11:50185257-50185274 chr11:50185258-50185271 chr11:50185259-50185270 chr11:50185258-50185269
13	CEBPB	chr11:50230060-50230405	MCF-7	breast:	n/a	n/a
14	CEBPB	chr11:50256020-50256220	HepG2	liver:	n/a	chr11:50256104-50256115
15	CEBPB	chr11:50202142-50202359	HepG2	liver:	n/a	chr11:50202284-50202295
16	CEBPB	chr11:50180269-50180536	MCF-7	breast:	n/a	n/a
17	CEBPB	chr11:50202172-50202422	IMR90	lung:	n/a	chr11:50202284-50202295
18	CEBPB	chr11:50256005-50256238	K562	blood:	n/a	chr11:50256104-50256115
19	CHD1	chr11:50409410-50409777	H1-hESC	embryonic stem cell:	n/a	n/a
20	CHD1	chr11:50382847-50382977	GM12878	blood:	n/a	n/a
21	CREB1	chr11:50257549-50258023	K562	blood:	n/a	chr11:50257724-50257737
22	CREB1	chr11:50257411-50258094	K562	blood:	n/a	chr11:50257724-50257737
23	CTCF	chr11:50251549-50251566	GM12878	blood:	n/a	n/a
24	CTCF	chr11:50291325-50291378	LNCaP	prostate:	n/a	n/a
25	CTCF	chr11:50293189-50293335	NHEK	skin:	n/a	n/a
26	CTCF	chr11:50316423-50316519	GM10266	blood:	n/a	n/a
27	CTCF	chr11:50262617-50262644	Kidney_OC	kidney:	n/a	n/a
28	CTCF	chr11:50294779-50294808	GM20000	blood:	n/a	n/a
29	CTCF	chr11:50251508-50251624	HUVEC	blood vessel:	n/a	n/a
30	CTCF	chr11:50264695-50264726	GM10266	blood:	n/a	n/a
31	CTCF	chr11:50401027-50401059	GM20000	blood:	n/a	n/a
32	CTCF	chr11:50252669-50252790	Fibrobl	skin:	n/a	n/a
33	CTCF	chr11:50214639-50214695	LNCaP	prostate:	n/a	n/a
34	CTCF	chr11:50174400-50174550	WI-38	lung:	n/a	n/a
35	CTCF	chr11:50248936-50248972	Spleen_OC	spleen:	n/a	n/a
36	CTCF	chr11:50220602-50220640	MCF-7	breast:	n/a	n/a
37	CTCF	chr11:50293200-50293350	SAEC	small airway:	n/a	n/a
38	CTCF	chr11:50376015-50376061	Pancreas_OC	pancreas:	n/a	n/a
39	CTCF	chr11:50251547-50251577	MCF-7	breast:	n/a	n/a
40	CTCF	chr11:50264521-50264545	GM13976	blood:	n/a	n/a
41	CTCF	chr11:50382479-50382654	K562	blood:	n/a	n/a
42	CTCF	chr11:50246753-50246827	Kidney_OC	kidney:	n/a	n/a
43	CTCF	chr11:50257340-50257490	SK-N-SH_RA	brain:	n/a	chr11:50257436-50257449
44	CTCF	chr11:50300095-50300112	GM10248	blood:	n/a	n/a
45	CTCF	chr11:50305210-50305247	GM20000	blood:	n/a	n/a
46	CTCF	chr11:50284186-50284275	GM20000	blood:	n/a	n/a
47	CTCF	chr11:50257370-50257473	SK-N-SH_RA	brain:	n/a	chr11:50257436-50257449
48	CTCF	chr11:50382446-50382672	IMR90	lung:	n/a	n/a
49	CTCF	chr11:50277249-50277334	Spleen_OC	spleen:	n/a	n/a
50	CTCF	chr11:50317679-50317740	GM13976	blood:	n/a	n/a

(count:2321 , 50 per page) page: 1 2 3 4 5 6 7 ... 47

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:50239550-50239600	SK-N-SH	brain:	n/a
2	chr11:50238214-50238264	SAEC	small airway:	n/a
3	chr11:50234973-50235023	GM12891	blood:	n/a
4	chr11:50239550-50239600	SK-N-SH	brain:	n/a
5	chr11:50238214-50238264	SAEC	small airway:	n/a
6	chr11:50234973-50235023	GM12891	blood:	n/a
7	chr11:50368251-50368301	HEEpiC	esophagus:	n/a
8	chr11:50234973-50235023	ovcar-3	ovarian:	n/a
9	chr11:50257256-50257306	SK-N-SH	brain:	n/a
10	chr11:50231261-50231311	NT2-D1	testis:	n/a
11	chr11:50371681-50371731	GM12891	blood:	n/a
12	chr11:50206530-50206580	RPTEC	kidney:	n/a
13	chr11:50238107-50238157	PANC-1	pancreas:	n/a
14	chr11:50258273-50258323	NHDF-neo	bronchial:	n/a
15	chr11:50258273-50258323	GM19239	blood:	n/a
16	chr11:50257625-50257675	SKMC	muscle:	n/a
17	chr11:50241016-50241066	ovcar-3	ovarian:	n/a
18	chr11:50257633-50257683	HCM	heart:	n/a
19	chr11:50220055-50220105	PrEC	prostate:	n/a
20	chr11:50227476-50227526	MCF-7	breast:	n/a
21	chr11:50239550-50239600	GM06990	blood:	n/a
22	chr11:50241016-50241066	HMEC	breast:	n/a
23	chr11:50256574-50256624	HMEC	breast:	n/a
24	chr11:50257625-50257675	SK-N-SH_RA	brain:	n/a
25	chr11:50227079-50227129	AG04450	lung:	fetal
26	chr11:50231261-50231311	PANC-1	pancreas:	n/a
27	chr11:50206530-50206580	HPAEpiC	pulmonary alveolar:	n/a
28	chr11:50258750-50258800	Hela-S3	cervix:	n/a
29	chr11:50227265-50227315	HCPEpiC	choroid plexus:	n/a
30	chr11:50220343-50220393	HRCEpiC	kidney:	n/a
31	chr11:50206530-50206580	HRPEpiC	eye:	n/a
32	chr11:50238009-50238059	GM06990	blood:	n/a
33	chr11:50257752-50257802	GM12892	blood:	n/a
34	chr11:50227476-50227526	AG04449	skin:	fetal
35	chr11:50227476-50227526	HCF	heart:	n/a
36	chr11:50257771-50257821	HCPEpiC	choroid plexus:	n/a
37	chr11:50234973-50235023	NH-A	brain:	n/a
38	chr11:50257625-50257675	AG09319	gingival:	n/a
39	chr11:50368251-50368301	Jurkat	blood:	n/a
40	chr11:50206561-50206611	Hela-S3	cervix:	n/a
41	chr11:50257771-50257821	HUVEC	blood vessel:	n/a
42	chr11:50371681-50371731	HCPEpiC	choroid plexus:	n/a
43	chr11:50206606-50206656	GM12878	blood:	n/a
44	chr11:50227199-50227249	HL-60	blood:	n/a
45	chr11:50371681-50371731	HEK293	kidney:	embryo
46	chr11:50238214-50238264	HPAEpiC	pulmonary alveolar:	n/a
47	chr11:50257771-50257821	NB4	blood:	n/a
48	chr11:50254503-50254553	HUVEC	blood vessel:	n/a
49	chr11:50254503-50254553	AG09309	skin:	n/a
50	chr11:50220389-50220439	SKMC	muscle:	n/a

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:50256839..50259422-chr11:50261676..50263683,2	K562	blood:
2	chr11:50172306..50174473-chr11:50176469..50178865,2	K562	blood:
3	chr11:50172306..50174473-chr11:50176469..50178865,2	K562	blood:

(count:47 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-OR4C13-7	chr11:50266792-50266965	NONHSAT021338
2	lnc-OR4C13-9	chr11:50378065-50378165	NONHSAT021344
3	lnc-OR4C13-7	chr11:50266792-50266898	NONHSAT021339
4	lnc-OR4C12-1	chr11:50232840-50233106	XLOC_009440
5	lnc-OR4C13-9	chr11:50375235-50375391	NONHSAT021345
6	lnc-OR4C13-7	chr11:50301079-50301142	NONHSAT021343
7	lnc-OR4C13-9	chr11:50375235-50375391	NONHSAT021344
8	lnc-OR4C13-1	chr11:50261115-50261299	ENSG00000254518
9	lnc-OR4C13-9	chr11:50368739-50368821	NONHSAT021344
10	lnc-OR4C13-9	chr11:50379313-50379548	NR_024504
11	lnc-OR4C13-7	chr11:50274586-50274767	NONHSAT021340
12	lnc-OR4C13-9	chr11:50379775-50379802	NR_024504
13	lnc-OR4C13-7	chr11:50279538-50279677	NONHSAT021339
14	lnc-OR4C13-1	chr11:50262310-50262433	ENSG00000254518
15	lnc-OR4C13-9	chr11:50368318-50368359	NR_024504
16	lnc-OR4C13-1	chr11:50263752-50263827	ENSG00000254518
17	lnc-OR4C13-7	chr11:50280085-50280169	NONHSAT021339
18	lnc-OR4C13-7	chr11:50279839-50280169	NONHSAT021342
19	lnc-OR4C12-1	chr11:50231598-50231759	XLOC_009440
20	lnc-OR4C13-7	chr11:50302810-50303035	NONHSAT021343
21	lnc-OR4C13-7	chr11:50302810-50303098	NONHSAT021342
22	lnc-OR4C13-7	chr11:50313156-50313246	NONHSAT021340
23	lnc-OR4C13-9	chr11:50379313-50379548	NONHSAT021345
24	lnc-OR4C13-7	chr11:50320710-50320877	NONHSAT021340
25	lnc-OR4C13-9	chr11:50368318-50368359	NONHSAT021344
26	lnc-OR4C13-1	chr11:50263752-50263827	NONHSAT021336
27	lnc-OR4C13-7	chr11:50302810-50302996	NONHSAT021339
28	lnc-OR4C13-9	chr11:50376439-50376850	NONHSAT021345
29	lnc-OR4C13-1	chr11:50257750-50258088	ENSG00000254518
30	lnc-OR4C13-7	chr11:50274586-50274767	NONHSAT021339
31	lnc-OR4C13-9	chr11:50376439-50376850	NONHSAT021344
32	lnc-OR4C13-7	chr11:50279538-50279677	NONHSAT021340
33	lnc-OR4C13-1	chr11:50262310-50262433	NONHSAT021336
34	lnc-OR4C13-9	chr11:50379775-50379803	NONHSAT021345
35	lnc-OR4C13-1	chr11:50261115-50261299	NONHSAT021336
36	lnc-OR4C13-7	chr11:50280085-50280169	NONHSAT021340
37	lnc-OR4C13-9	chr11:50378065-50378165	NR_024504
38	lnc-OR4C13-1	chr11:50257750-50258210	NONHSAT021336
39	lnc-OR4C13-7	chr11:50274586-50274778	NONHSAT021338
40	lnc-OR4C13-7	chr11:50266852-50266898	NONHSAT021340
41	lnc-OR4C13-9	chr11:50378065-50378165	NONHSAT021345
42	lnc-OR4C13-9	chr11:50379313-50379802	NONHSAT021344
43	lnc-OR4C13-9	chr11:50375274-50375391	NR_024504
44	lnc-OR4C13-1	chr11:50257789-50258088	ENSG00000254518
45	lnc-OR4C13-7	chr11:50320143-50320239	NONHSAT021340
46	lnc-OR4C13-7	chr11:50301870-50302020	NONHSAT021343
47	lnc-OR4C13-9	chr11:50368739-50368821	NR_024504

No data

Variant related genes	Relation type
ENSG00000254518	TF binding region
ENSG00000255042	TF binding region
ENSG00000255500	TF binding region
ENSG00000254840	TF binding region
ENSG00000255001	TF binding region
ENSG00000236919	TF binding region
ENSG00000214883	TF binding region
ENSG00000254518	CpG island
ENSG00000255042	CpG island
ENSG00000255500	CpG island
ENSG00000254840	CpG island
ENSG00000255001	CpG island
ENSG00000236919	CpG island
ENSG00000214883	CpG island
ENSG00000254518	chromatin interactions

Extended variants
information (count: 8308 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:8308 , 50 per page) page: 1 2 3 4 5 6 7 ... 167

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs559121223	chr11:50188216-50188217	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs182606115	chr11:50188219-50188220	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs561827798	chr11:50188247-50188248	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs542267481	chr11:50188253-50188254	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs562187107	chr11:50188254-50188255	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs373967302	chr11:50188260-50188261	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs528082121	chr11:50188273-50188274	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs527462665	chr11:50188277-50188278	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs188006399	chr11:50188278-50188279	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs570751068	chr11:50188287-50188288	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs138666122	chr11:50188305-50188306	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs192851401	chr11:50188310-50188311	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs569594943	chr11:50188340-50188341	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs571564188	chr11:50188360-50188361	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs78698970	chr11:50188400-50188401	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs548638513	chr11:50188450-50188451	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs565463591	chr11:50188505-50188506	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs534109551	chr11:50188508-50188509	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs553984163	chr11:50188537-50188538	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs149315388	chr11:50188622-50188623	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs185267290	chr11:50188657-50188658	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs556588328	chr11:50188661-50188662	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs576351100	chr11:50188670-50188671	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs568516877	chr11:50188795-50188796	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs541887244	chr11:50188818-50188819	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs34581379	chr11:50188849-50188850	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs562148516	chr11:50188857-50188858	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs572613497	chr11:50188876-50188877	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs527830168	chr11:50188891-50188892	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs187615375	chr11:50188947-50188948	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs564229199	chr11:50188951-50188952	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs567418918	chr11:50191624-50191625	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs536299783	chr11:50191668-50191669	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs546699095	chr11:50191682-50191683	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs566298599	chr11:50191683-50191684	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs77314122	chr11:50191684-50191685	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs183415570	chr11:50191689-50191690	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs537436567	chr11:50191692-50191693	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs372419155	chr11:50191710-50191711	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs554649477	chr11:50191832-50191833	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs574485231	chr11:50191893-50191894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs572846788	chr11:50191904-50191905	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs540287144	chr11:50191943-50191944	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs544029637	chr11:50191992-50191993	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs563806388	chr11:50191996-50191997	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs560302865	chr11:50192070-50192071	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs573327150	chr11:50192076-50192077	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs187126545	chr11:50192077-50192078	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs565423065	chr11:50192108-50192109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs113248298	chr11:50192138-50192139	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Wilms tumour	21544195	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Renal cell carcinoma	18194544	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Hirschsprung''s Disease	21712996	CNVD
Follicular lymphoma	20505157	CNVD
Colorectal cancer	21128281	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21990379	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
small cell lung cancer	20016488	CNVD
Schizophrenia	23813976	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Mortal	21835882	CNVD
Autism	22495309	CNVD
Melanoma	20877625	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21785460	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Esophageal cancer	21851588	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	17142309	CNVD
Bipolar disorder	19214233	CNVD
Medulloblastoma	21163964	CNVD
early-passage human iPS cells	21368824	CNVD
Bipolar disorder	19114987	CNVD

Chromatin state (count:151 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:50188200-50189000	Enhancers	Adipose Nuclei	Adipose
2	chr11:50191600-50191800	ZNF genes & repeats	Right Atrium	heart
3	chr11:50191800-50194400	Weak transcription	Right Atrium	heart
4	chr11:50192600-50195800	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
5	chr11:50193600-50193800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr11:50202200-50204200	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr11:50206200-50207200	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr11:50217000-50218200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
9	chr11:50220000-50220800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr11:50220600-50221200	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
11	chr11:50238000-50238400	ZNF genes & repeats	Esophagus	oesophagus
12	chr11:50242200-50242400	ZNF genes & repeats	Placenta	Placenta
13	chr11:50242400-50246200	Weak transcription	Placenta	Placenta
14	chr11:50246400-50256200	Weak transcription	Placenta	Placenta
15	chr11:50250800-50256200	Weak transcription	K562	blood
16	chr11:50256200-50256400	Enhancers	Placenta	Placenta
17	chr11:50256200-50258600	Active TSS	K562	blood
18	chr11:50256400-50256800	Flanking Active TSS	Placenta	Placenta
19	chr11:50256800-50257200	Active TSS	Placenta	Placenta
20	chr11:50257000-50258200	ZNF genes & repeats	Fetal Adrenal Gland	Adrenal Gland
21	chr11:50257200-50257400	Flanking Active TSS	Placenta	Placenta
22	chr11:50257200-50257600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
23	chr11:50257200-50257600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr11:50257200-50257600	Active TSS	Primary T cells fromperipheralblood	blood
25	chr11:50257200-50257600	Active TSS	Primary T regulatory cells fromperipheralblood	blood
26	chr11:50257200-50257600	Active TSS	Brain Cingulate Gyrus	brain
27	chr11:50257200-50257600	ZNF genes & repeats	Fetal Intestine Small	intestine
28	chr11:50257200-50257600	ZNF genes & repeats	Fetal Stomach	stomach
29	chr11:50257200-50257600	Active TSS	Ovary	ovary
30	chr11:50257200-50257600	Active TSS	Psoas Muscle	Psoas
31	chr11:50257200-50257600	Active TSS	Right Atrium	heart
32	chr11:50257200-50257600	Active TSS	Right Ventricle	heart
33	chr11:50257200-50257600	Active TSS	Skeletal Muscle Female	skeletal muscle
34	chr11:50257200-50257600	Active TSS	Stomach Smooth Muscle	stomach
35	chr11:50257200-50257600	Active TSS	HSMM	muscle
36	chr11:50257200-50258000	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
37	chr11:50257200-50258000	ZNF genes & repeats	Gastric	stomach
38	chr11:50257200-50258000	ZNF genes & repeats	Pancreas	Pancrea
39	chr11:50257200-50258200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr11:50257400-50258000	Active TSS	Fetal Lung	lung
41	chr11:50257400-50258800	ZNF genes & repeats	Placenta	Placenta
42	chr11:50258000-50260600	Weak transcription	Gastric	stomach
43	chr11:50258800-50274600	Weak transcription	Placenta	Placenta
44	chr11:50260600-50260800	ZNF genes & repeats	Gastric	stomach
45	chr11:50274600-50275400	Strong transcription	Placenta	Placenta
46	chr11:50275400-50277000	Weak transcription	Placenta	Placenta
47	chr11:50295800-50296200	Enhancers	Adipose Nuclei	Adipose
48	chr11:50324400-50325400	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
49	chr11:50326400-50345800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
50	chr11:50326600-50328800	ZNF genes & repeats	Liver	Liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links