Variant report

Variant	esv2757484
Chromosome Location	chr12:335010-543206
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2355)
CpG islands
(count:3052)
Chromatin interactive
region (count:71)
LncRNA
region (count:15)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2355 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:346692-346907	HepG2	liver:	n/a	n/a
2	ARID3A	chr12:496751-497043	HepG2	liver:	n/a	n/a
3	ARID3A	chr12:496985-497243	K562	blood:	n/a	n/a
4	ARID3A	chr12:345774-345842	HepG2	liver:	n/a	n/a
5	ARID3A	chr12:498368-499050	HepG2	liver:	n/a	n/a
6	ARID3A	chr12:511331-511652	K562	blood:	n/a	n/a
7	ARID3A	chr12:510180-510242	K562	blood:	n/a	n/a
8	ATF1	chr12:373538-373815	K562	blood:	n/a	n/a
9	ATF1	chr12:510436-510930	K562	blood:	n/a	n/a
10	ATF1	chr12:515974-516345	K562	blood:	n/a	n/a
11	ATF1	chr12:498342-499040	K562	blood:	n/a	n/a
12	ATF1	chr12:511278-511685	K562	blood:	n/a	n/a
13	ATF2	chr12:498249-498699	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr12:510432-510994	GM12878	blood:	n/a	n/a
15	ATF2	chr12:510426-510971	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr12:498248-499008	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF2	chr12:498288-498958	GM12878	blood:	n/a	n/a
18	ATF2	chr12:498219-498681	GM12878	blood:	n/a	n/a
19	ATF2	chr12:498695-499111	GM12878	blood:	n/a	n/a
20	ATF3	chr12:498218-498844	A549	lung:	n/a	n/a
21	ATF3	chr12:498408-498999	GM12878	blood:	n/a	n/a
22	ATF3	chr12:498615-498927	K562	blood:	n/a	n/a
23	ATF3	chr12:498528-499063	HepG2	liver:	n/a	n/a
24	ATF3	chr12:498279-499101	A549	lung:	n/a	n/a
25	ATF3	chr12:515973-516410	K562	blood:	n/a	n/a
26	ATF3	chr12:498635-498940	HepG2	liver:	n/a	n/a
27	ATF3	chr12:498593-498999	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr12:498300-498510	K562	blood:	n/a	n/a
29	BACH1	chr12:515953-516283	K562	blood:	n/a	n/a
30	BACH1	chr12:498205-498680	H1-hESC	embryonic stem cell:	n/a	n/a
31	BACH1	chr12:510544-510949	H1-hESC	embryonic stem cell:	n/a	n/a
32	BATF	chr12:529122-529352	GM12878	blood:	n/a	n/a
33	BATF	chr12:382502-382775	GM12878	blood:	n/a	n/a
34	BATF	chr12:529788-530091	GM12878	blood:	n/a	n/a
35	BCL11A	chr12:368058-368307	GM12878	blood:	n/a	n/a
36	BCL3	chr12:498186-499130	A549	lung:	n/a	chr12:498781-498790 chr12:498492-498501
37	BCL3	chr12:510404-511202	A549	lung:	n/a	n/a
38	BCL3	chr12:498215-499210	A549	lung:	n/a	chr12:498781-498790 chr12:498492-498501
39	BCL3	chr12:377133-378098	A549	lung:	n/a	n/a
40	BCL3	chr12:510447-511339	A549	lung:	n/a	n/a
41	BCLAF1	chr12:497860-499069	GM12878	blood:	n/a	chr12:498781-498790 chr12:498492-498501
42	BCLAF1	chr12:498214-499204	GM12878	blood:	n/a	chr12:498781-498790 chr12:498492-498501
43	BHLHE40	chr12:498332-499194	GM12878	blood:	n/a	chr12:498491-498507
44	BHLHE40	chr12:515401-515749	K562	blood:	n/a	n/a
45	BHLHE40	chr12:344171-344359	K562	blood:	n/a	chr12:344223-344232 chr12:344217-344238 chr12:344223-344232 chr12:344222-344231 chr12:344221-344234
46	BHLHE40	chr12:498333-498958	K562	blood:	n/a	chr12:498491-498507
47	BHLHE40	chr12:346383-346899	HepG2	liver:	n/a	n/a
48	BHLHE40	chr12:510198-511441	K562	blood:	n/a	n/a
49	BHLHE40	chr12:366144-366293	K562	blood:	n/a	n/a
50	BHLHE40	chr12:515997-516342	K562	blood:	n/a	n/a

(count:3052 , 50 per page) page: 1 2 3 4 5 6 7 ... 62

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:498145-498195	AG09309	skin:	n/a
2	chr12:498607-498657	HCT-116	colon:	n/a
3	chr12:498145-498195	AG09309	skin:	n/a
4	chr12:498607-498657	HCT-116	colon:	n/a
5	chr12:372049-372099	HRE	kidney:	n/a
6	chr12:392537-392587	HEK293	kidney:	embryo
7	chr12:498129-498179	AG10803	skin:	n/a
8	chr12:372049-372099	RPTEC	kidney:	n/a
9	chr12:497824-497874	SKMC	muscle:	n/a
10	chr12:498162-498212	T-47D	breast:	n/a
11	chr12:372790-372840	IMR90	lung:	fetal
12	chr12:498876-498926	AG09309	skin:	n/a
13	chr12:498827-498877	HMEC	breast:	n/a
14	chr12:499376-499426	HMEC	breast:	n/a
15	chr12:351262-351312	HAEpiC	amniotic membrane:	n/a
16	chr12:510550-510600	SAEC	small airway:	n/a
17	chr12:511362-511412	AG09309	skin:	n/a
18	chr12:372790-372840	Jurkat	blood:	n/a
19	chr12:534563-534613	HPAEpiC	pulmonary alveolar:	n/a
20	chr12:498630-498680	ProgFib	skin:	n/a
21	chr12:510594-510644	HCT-116	colon:	n/a
22	chr12:498876-498926	MCF10A-Er-Src	breast:	n/a
23	chr12:534669-534719	PFSK-1	brain:	n/a
24	chr12:534563-534613	HCPEpiC	choroid plexus:	n/a
25	chr12:535855-535905	MCF10A-Er-Src	breast:	n/a
26	chr12:372246-372296	K562	blood:	n/a
27	chr12:351361-351411	HEK293	kidney:	embryo
28	chr12:341431-341481	RPTEC	kidney:	n/a
29	chr12:351361-351411	SAEC	small airway:	n/a
30	chr12:372259-372309	ovcar-3	ovarian:	n/a
31	chr12:497824-497874	HCF	heart:	n/a
32	chr12:498868-498918	PFSK-1	brain:	n/a
33	chr12:495079-495129	HPAEpiC	pulmonary alveolar:	n/a
34	chr12:534563-534613	GM12892	blood:	n/a
35	chr12:515355-515405	AG04449	skin:	fetal
36	chr12:534563-534613	IMR90	lung:	fetal
37	chr12:351262-351312	LNCaP	prostate:	n/a
38	chr12:498129-498179	AoSMC	blood vessel:	n/a
39	chr12:510550-510600	Caco-2	colon:	n/a
40	chr12:497824-497874	HNPCEpiC	eye:	n/a
41	chr12:371916-371966	HepG2	liver:	n/a
42	chr12:499376-499426	CMK	blood:	n/a
43	chr12:510550-510600	AG09309	skin:	n/a
44	chr12:498417-498467	HCPEpiC	choroid plexus:	n/a
45	chr12:515355-515405	Hepatocyte	liver:	n/a
46	chr12:498417-498467	Hela-S3	cervix:	n/a
47	chr12:372790-372840	AG04449	skin:	fetal
48	chr12:499376-499426	NH-A	brain:	n/a
49	chr12:499376-499426	HPAEpiC	pulmonary alveolar:	n/a
50	chr12:498354-498404	HPAEpiC	pulmonary alveolar:	n/a

(count:71 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr12:494061..497561-chr12:499622..502914,3	K562	blood:
2	chr1:10002901..10003432-chr12:498459..499050,2	Hela-S3	cervix:
3	chr12:515684..517646-chr12:519999..522840,2	K562	blood:
4	chr12:488968..490712-chr12:497347..499213,2	MCF-7	breast:
5	chr12:381899..384416-chr12:386819..388918,2	K562	blood:
6	chr12:335174..337021-chr12:347324..348997,2	MCF-7	breast:
7	chr12:475322..477819-chr12:485122..486819,2	K562	blood:
8	chr12:498062..498901-chr7:5632387..5632898,2	Hela-S3	cervix:
9	chr12:473052..475840-chr12:477917..479467,2	K562	blood:
10	chr12:541135..544043-chr12:1097640..1100614,2	K562	blood:
11	chr12:509480..512671-chr12:512718..518002,7	K562	blood:
12	chr12:488452..493838-chr12:496746..499307,5	MCF-7	breast:
13	chr12:399444..402323-chr12:403579..405598,2	K562	blood:
14	chr12:424975..427047-chr12:431144..433406,2	MCF-7	breast:
15	chr12:498148..498831-chr9:123555275..123555878,2	Hela-S3	cervix:
16	chr12:510128..512811-chr12:522624..524245,2	MCF-7	breast:
17	chr12:509245..512944-chr12:513140..518002,8	K562	blood:
18	chr12:437485..439145-chr12:442839..444531,2	MCF-7	breast:
19	chr12:498804..500777-chr12:509921..512244,2	K562	blood:
20	chr12:510695..511242-chr7:6098537..6099050,2	Hela-S3	cervix:
21	chr12:378409..380462-chr12:383368..386178,2	MCF-7	breast:
22	chr12:418157..420807-chr12:497062..498857,2	MCF-7	breast:
23	chr12:360330..361839-chr12:364810..367065,2	K562	blood:
24	chr12:418157..420807-chr12:497062..498857,2	MCF-7	breast:
25	chr12:402335..404067-chr12:405685..407593,2	K562	blood:
26	chr12:391396..393092-chr12:395064..396850,2	K562	blood:
27	chr12:391396..393092-chr12:395064..396850,2	K562	blood:
28	chr12:510904..511428-chr12:655804..656333,2	MCF-7	breast:
29	chr12:498060..499050-chr5:131892887..131893550,2	Hela-S3	cervix:
30	chr12:423846..425522-chr12:432470..434859,2	K562	blood:
31	chr12:473052..475840-chr12:477917..479467,2	K562	blood:
32	chr12:508524..511172-chr12:751040..752702,2	MCF-7	breast:
33	chr12:496401..500895-chr12:509695..513736,6	K562	blood:
34	chr12:438334..440331-chr12:440530..443524,2	MCF-7	breast:
35	chr12:335174..337021-chr12:347324..348997,2	MCF-7	breast:
36	chr12:438334..440331-chr12:440530..443524,2	MCF-7	breast:
37	chr12:402335..404067-chr12:405685..407593,2	K562	blood:
38	chr12:303209..305233-chr12:388816..390804,2	K562	blood:
39	chr12:490753..496037-chr12:496468..499221,8	MCF-7	breast:
40	chr12:343024..345718-chr12:346456..348624,2	MCF-7	breast:
41	chr12:497611..500419-chr12:508788..511712,2	MCF-7	breast:
42	chr12:486794..489246-chr12:492841..495214,2	K562	blood:
43	chr12:391396..394249-chr12:395350..397810,2	K562	blood:
44	chr12:381899..384416-chr12:386819..388918,2	K562	blood:
45	chr12:378409..380462-chr12:383368..386178,2	MCF-7	breast:
46	chr12:371632..373367-chr12:383696..385601,2	MCF-7	breast:
47	chr12:371815..374343-chr12:375834..377592,4	K562	blood:
48	chr12:491725..493864-chr12:495740..497684,2	K562	blood:
49	chr12:467803..470221-chr12:473673..475733,2	K562	blood:
50	chr12:498195..499241-chr14:91294171..91295172,4	Hela-S3	cervix:

(count:15 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KDM5A-2	chr12:365639-365806	ENSG00000255746.1
2	lnc-KDM5A-2	chr12:362608-362913	ENSG00000255746.1
3	lnc-CCDC77-1	chr12:499138-499291	NONHSAT025341
4	lnc-B4GALNT3-5	chr12:514677-514730	NONHSAT025343
5	lnc-KDM5A-1	chr12:383120-386289	ENSG00000261799.1
6	lnc-B4GALNT3-5	chr12:510817-510850	NONHSAT025343
7	lnc-KDM5A-4	chr12:510059-510216	NONHSAT025342
8	lnc-KDM5A-4	chr12:510484-510565	NONHSAT025342
9	lnc-KDM5A-2	chr12:366437-366602	NONHSAT025324
10	lnc-KDM5A-4	chr12:501254-501279	NONHSAT025342
11	lnc-KDM5A-2	chr12:365683-365806	NONHSAT025324
12	lnc-CCDC77-1	chr12:498439-498652	NONHSAT025341
13	lnc-B4GALNT3-5	chr12:518534-518947	NONHSAT025343
14	lnc-KDM5A-2	chr12:367087-367167	NONHSAT025324
15	lnc-KDM5A-2	chr12:366437-366465	ENSG00000255746.1

No data

Variant related genes	Relation type
CCDC77	TF binding region
KDM5A	TF binding region
ENSG00000255746	TF binding region
SLC6A13	TF binding region
ENSG00000261799	TF binding region
CCDC77	CpG island
KDM5A	CpG island
ENSG00000255746	CpG island
SLC6A13	CpG island
ENSG00000261799	CpG island
ENSG00000258884	chromatin interactions
ENSG00000119402	chromatin interactions
ENSG00000214654	chromatin interactions
ENSG00000162441	chromatin interactions
ENSG00000113522	chromatin interactions
ENSG00000082805	chromatin interactions
ENSG00000120647	chromatin interactions
ENSG00000002016	chromatin interactions
ENSG00000073614	chromatin interactions
ENSG00000086232	chromatin interactions
ENSG00000178999	chromatin interactions
ENSG00000250132	chromatin interactions
ENSG00000228150	chromatin interactions
ENSG00000255746	chromatin interactions
ENSG00000075618	chromatin interactions
ENSG00000010379	chromatin interactions
ENSG00000177406	chromatin interactions

Extended variants
information (count: 9022 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:9022 , 50 per page) page: 1 2 3 4 5 6 7 ... 181

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs525631	chr12:335010-335011	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs12049966	chr12:335011-335012	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs374603654	chr12:335036-335037	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs558997508	chr12:335092-335093	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs374838115	chr12:335114-335115	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs57582163	chr12:335118-335119	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs541667917	chr12:335128-335129	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs559952505	chr12:335131-335132	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs540225996	chr12:335133-335134	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs113200265	chr12:335145-335146	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs139946509	chr12:335158-335159	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs563368107	chr12:335188-335189	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs530461134	chr12:335194-335195	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs552108665	chr12:335208-335209	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs368305536	chr12:335273-335274	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs115578871	chr12:335305-335306	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs546476269	chr12:335322-335323	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs374803253	chr12:335327-335328	Weak transcription Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs567943852	chr12:335411-335412	Enhancers Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs565020792	chr12:335430-335431	Enhancers Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs3782867	chr12:335434-335435	Enhancers Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs34378007	chr12:335481-335482	Enhancers Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs41276698	chr12:335495-335496	Enhancers Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs201039671	chr12:335512-335513	Enhancers Strong transcription Weak transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs200232184	chr12:335537-335538	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs577334588	chr12:335541-335542	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs577483541	chr12:335551-335552	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs552013277	chr12:335552-335553	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs76709380	chr12:335578-335579	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs563873847	chr12:335584-335585	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs202216220	chr12:335593-335594	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs140655819	chr12:335631-335632	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs370305151	chr12:335632-335633	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs536955832	chr12:335649-335650	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs149831603	chr12:335650-335651	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs41300044	chr12:335656-335657	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs145751682	chr12:335667-335668	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs76138594	chr12:335671-335672	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs192481751	chr12:335691-335692	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs200345933	chr12:335716-335717	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs41303001	chr12:335717-335718	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs74962411	chr12:335775-335776	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs528058009	chr12:335785-335786	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs55984309	chr12:335803-335804	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs2289955	chr12:335805-335806	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs368878395	chr12:335841-335842	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs529064717	chr12:335862-335863	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs567849328	chr12:335871-335872	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs534735835	chr12:335872-335873	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs537518583	chr12:335894-335895	Enhancers Strong transcription Weak transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Cancer	20164920	CNVD
Myelofibrosis	22110671	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Glaucoma	21310917	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Squamous cell cancer	19607727	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Mental retardation	17847001	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
abnormal development	18461090	CNVD
Ovarian cancer	20844748	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
small cell lung cancer	20016488	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Developmental delay	21147756	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21509527	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Autism	22495309	CNVD
Ovarian cancer	21720365	CNVD
Myelodysplastic syndrome	21251322	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Glioblastoma multiforme	22291905	CNVD
Melanoma	20877625	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
small cell lung cancer	17426248	CNVD

Chromatin state (count:5750 , 50 per page) page: 1 2 3 4 5 6 7 ... 115

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:324400-337200	Weak transcription	Brain Inferior Temporal Lobe	brain
2	chr12:327200-338800	Strong transcription	Liver	Liver
3	chr12:330200-336800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
4	chr12:332200-336800	Weak transcription	Brain Cingulate Gyrus	brain
5	chr12:333400-335400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr12:335400-336000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr12:335600-336000	Enhancers	Fetal Brain Male	brain
8	chr12:336000-340200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr12:336800-338800	Enhancers	Brain Cingulate Gyrus	brain
10	chr12:336800-338800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
11	chr12:337000-337400	Bivalent Enhancer	HSMMtube	muscle
12	chr12:337200-337400	Enhancers	Brain Inferior Temporal Lobe	brain
13	chr12:337400-337800	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr12:337400-337800	Enhancers	HSMMtube	muscle
15	chr12:337400-343000	Enhancers	Brain Hippocampus Middle	brain
16	chr12:337800-338000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr12:337800-338000	Enhancers	Fetal Muscle Trunk	muscle
18	chr12:337800-338400	Enhancers	Brain Inferior Temporal Lobe	brain
19	chr12:337800-339000	Weak transcription	HSMMtube	muscle
20	chr12:337800-340800	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
21	chr12:337800-341400	Enhancers	Brain Anterior Caudate	brain
22	chr12:338000-338200	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
23	chr12:338000-339000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
24	chr12:338000-339000	Enhancers	Brain Substantia Nigra	brain
25	chr12:338200-339000	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr12:338200-341200	Enhancers	Cortex derived primary cultured neurospheres	brain
27	chr12:338400-338600	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
28	chr12:338400-338600	Enhancers	Brain Angular Gyrus	brain
29	chr12:338400-339200	Enhancers	Brain Germinal Matrix	brain
30	chr12:338400-339600	Weak transcription	Brain Inferior Temporal Lobe	brain
31	chr12:338400-340200	Enhancers	iPS-15b Cell Line	embryonic stem cell
32	chr12:338600-339200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr12:338600-339200	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr12:338600-339400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr12:338600-340200	Weak transcription	Brain Angular Gyrus	brain
36	chr12:338600-341000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr12:338600-343000	Enhancers	Fetal Brain Male	brain
38	chr12:338800-339200	Weak transcription	Liver	Liver
39	chr12:338800-339400	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
40	chr12:338800-339800	Weak transcription	Brain Cingulate Gyrus	brain
41	chr12:338800-340000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
42	chr12:338800-340800	Enhancers	H1 Cell Line	embryonic stem cell
43	chr12:339000-339200	Enhancers	Skeletal Muscle Female	skeletal muscle
44	chr12:339000-339400	Enhancers	Fetal Muscle Trunk	muscle
45	chr12:339000-339600	Weak transcription	Brain Substantia Nigra	brain
46	chr12:339000-341000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr12:339000-343400	Enhancers	Fetal Muscle Leg	muscle
48	chr12:339000-343400	Enhancers	HSMMtube	muscle
49	chr12:339200-339400	Enhancers	HUES48 Cell Line	embryonic stem cell
50	chr12:339200-340200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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