Variant report

Variant	esv2757490
Chromosome Location	chr12:9855958-9888553
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:895)
CpG islands
(count:183)
Chromatin interactive
region (count:20)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:895 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:9871635-9871754	HepG2	liver:	n/a	n/a
2	ATF1	chr12:9874056-9874305	K562	blood:	n/a	n/a
3	ATF2	chr12:9874252-9874755	GM12878	blood:	n/a	n/a
4	ATF2	chr12:9884281-9884765	GM12878	blood:	n/a	n/a
5	ATF2	chr12:9872292-9872835	GM12878	blood:	n/a	n/a
6	ATF2	chr12:9865396-9865941	GM12878	blood:	n/a	n/a
7	ATF2	chr12:9884290-9884801	GM12878	blood:	n/a	n/a
8	ATF2	chr12:9869955-9870569	GM12878	blood:	n/a	n/a
9	ATF2	chr12:9885386-9886178	GM12878	blood:	n/a	n/a
10	ATF2	chr12:9885601-9886061	GM12878	blood:	n/a	n/a
11	ATF2	chr12:9858672-9859173	GM12878	blood:	n/a	n/a
12	ATF2	chr12:9873873-9874828	GM12878	blood:	n/a	n/a
13	BACH1	chr12:9876693-9876722	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr12:9864364-9864528	H1-hESC	embryonic stem cell:	n/a	n/a
15	BATF	chr12:9867852-9868142	GM12878	blood:	n/a	n/a
16	BATF	chr12:9874330-9874684	GM12878	blood:	n/a	n/a
17	BATF	chr12:9870113-9870455	GM12878	blood:	n/a	n/a
18	BATF	chr12:9872349-9872875	GM12878	blood:	n/a	chr12:9872640-9872651
19	BATF	chr12:9864839-9865102	GM12878	blood:	n/a	n/a
20	BATF	chr12:9872402-9872831	GM12878	blood:	n/a	chr12:9872640-9872651
21	BATF	chr12:9885494-9885999	GM12878	blood:	n/a	n/a
22	BATF	chr12:9865513-9866092	GM12878	blood:	n/a	n/a
23	BATF	chr12:9864781-9865123	GM12878	blood:	n/a	n/a
24	BATF	chr12:9885563-9885991	GM12878	blood:	n/a	n/a
25	BATF	chr12:9865511-9866112	GM12878	blood:	n/a	n/a
26	BATF	chr12:9861516-9861773	GM12878	blood:	n/a	n/a
27	BATF	chr12:9858880-9859154	GM12878	blood:	n/a	n/a
28	BCL11A	chr12:9865480-9866093	GM12878	blood:	n/a	n/a
29	BCL11A	chr12:9885580-9885992	GM12878	blood:	n/a	n/a
30	BCL11A	chr12:9874449-9874675	GM12878	blood:	n/a	n/a
31	BCL11A	chr12:9874179-9874537	GM12878	blood:	n/a	n/a
32	BCL3	chr12:9873743-9874484	A549	lung:	n/a	n/a
33	BCLAF1	chr12:9873976-9874860	GM12878	blood:	n/a	n/a
34	BCLAF1	chr12:9885400-9886135	GM12878	blood:	n/a	n/a
35	BCLAF1	chr12:9883933-9884848	GM12878	blood:	n/a	chr12:9884586-9884595
36	BCLAF1	chr12:9870096-9870600	GM12878	blood:	n/a	n/a
37	BCLAF1	chr12:9865281-9865730	GM12878	blood:	n/a	n/a
38	BCLAF1	chr12:9860661-9861143	GM12878	blood:	n/a	n/a
39	BHLHE40	chr12:9882968-9883574	GM12878	blood:	n/a	n/a
40	BHLHE40	chr12:9870886-9871381	GM12878	blood:	n/a	n/a
41	BHLHE40	chr12:9860829-9861352	K562	blood:	n/a	n/a
42	BHLHE40	chr12:9885577-9886144	GM12878	blood:	n/a	n/a
43	BHLHE40	chr12:9865712-9865926	GM12878	blood:	n/a	n/a
44	BHLHE40	chr12:9869868-9870566	GM12878	blood:	n/a	n/a
45	BHLHE40	chr12:9883935-9884932	GM12878	blood:	n/a	n/a
46	BHLHE40	chr12:9874041-9874751	GM12878	blood:	n/a	n/a
47	BHLHE40	chr12:9860602-9861104	GM12878	blood:	n/a	n/a
48	BRCA1	chr12:9860574-9860597	GM12878	blood:	n/a	n/a
49	BRCA1	chr12:9871191-9871363	GM12878	blood:	n/a	n/a
50	BRCA1	chr12:9884358-9884363	GM12878	blood:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:9886905-9886955	SK-N-MC	brain:	n/a
2	chr12:9885564-9885614	AG04450	lung:	fetal
3	chr12:9886905-9886955	MCF10A-Er-Src	breast:	n/a
4	chr12:9885998-9886048	HRPEpiC	eye:	n/a
5	chr12:9885998-9886048	NHDF-neo	bronchial:	n/a
6	chr12:9885564-9885614	NT2-D1	testis:	n/a
7	chr12:9885998-9886048	GM12891	blood:	n/a
8	chr12:9885564-9885614	HCM	heart:	n/a
9	chr12:9886905-9886955	SKMC	muscle:	n/a
10	chr12:9885564-9885614	U87	brain:	n/a
11	chr12:9885998-9886048	HCM	heart:	n/a
12	chr12:9886905-9886955	ECC-1	luminal epithelium:	n/a
13	chr12:9885998-9886048	HepG2	liver:	n/a
14	chr12:9886905-9886955	HepG2	liver:	n/a
15	chr12:9886905-9886955	Caco-2	colon:	n/a
16	chr12:9885998-9886048	AG09319	gingival:	n/a
17	chr12:9885564-9885614	HPAEpiC	pulmonary alveolar:	n/a
18	chr12:9885564-9885614	NB4	blood:	n/a
19	chr12:9885564-9885614	HAEpiC	amniotic membrane:	n/a
20	chr12:9885564-9885614	GM06990	blood:	n/a
21	chr12:9886905-9886955	A549	lung:	n/a
22	chr12:9886905-9886955	HCT-116	colon:	n/a
23	chr12:9886905-9886955	PANC-1	pancreas:	n/a
24	chr12:9886905-9886955	HUVEC	blood vessel:	n/a
25	chr12:9886905-9886955	HNPCEpiC	eye:	n/a
26	chr12:9885564-9885614	LNCaP	prostate:	n/a
27	chr12:9885564-9885614	K562	blood:	n/a
28	chr12:9885564-9885614	HCT-116	colon:	n/a
29	chr12:9885998-9886048	HAEpiC	amniotic membrane:	n/a
30	chr12:9885564-9885614	HUVEC	blood vessel:	n/a
31	chr12:9885998-9886048	AoSMC	blood vessel:	n/a
32	chr12:9885998-9886048	HL-60	blood:	n/a
33	chr12:9885998-9886048	SK-N-SH_RA	brain:	n/a
34	chr12:9886905-9886955	Jurkat	blood:	n/a
35	chr12:9885998-9886048	HPAEpiC	pulmonary alveolar:	n/a
36	chr12:9886905-9886955	SAEC	small airway:	n/a
37	chr12:9885998-9886048	AG04450	lung:	fetal
38	chr12:9886905-9886955	IMR90	lung:	fetal
39	chr12:9885564-9885614	ProgFib	skin:	n/a
40	chr12:9885564-9885614	A549	lung:	n/a
41	chr12:9886905-9886955	HIPEpiC	eye:	n/a
42	chr12:9886905-9886955	GM06990	blood:	n/a
43	chr12:9886905-9886955	AoSMC	blood vessel:	n/a
44	chr12:9885564-9885614	GM12891	blood:	n/a
45	chr12:9885998-9886048	NHBE	bronchial:	n/a
46	chr12:9886905-9886955	NT2-D1	testis:	n/a
47	chr12:9886905-9886955	PrEC	prostate:	n/a
48	chr12:9886905-9886955	HCM	heart:	n/a
49	chr12:9886905-9886955	Hepatocyte	liver:	n/a
50	chr12:9886905-9886955	AG10803	skin:	n/a

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:9870894..9872831-chr12:9873111..9875756,2	MCF-7	breast:
2	chr12:9799365..9802259-chr12:9859677..9861748,3	MCF-7	breast:
3	chr12:9824506..9827100-chr12:9861527..9863862,2	K562	blood:
4	chr12:9786627..9787276-chr12:9859955..9860506,2	MCF-7	breast:
5	chr12:9799499..9803059-chr12:9853903..9856114,3	K562	blood:
6	chr12:9876569..9878295-chr12:9885822..9888452,2	K562	blood:
7	chr12:9786487..9787504-chr12:9860467..9861450,7	K562	blood:
8	chr12:9881185..9883012-chr12:9884360..9886826,2	K562	blood:
9	chr12:9888502..9890048-chr12:9893130..9895750,2	K562	blood:
10	chr12:9876110..9878240-chr12:9880296..9883371,3	K562	blood:
11	chr12:9853903..9855741-chr12:9860997..9863949,2	MCF-7	breast:
12	chr12:9800782..9802831-chr12:9859086..9861954,2	MCF-7	breast:
13	chr12:9851492..9853618-chr12:9859229..9860813,2	K562	blood:
14	chr12:9874964..9878982-chr12:9880296..9882811,3	K562	blood:
15	chr12:9801303..9803979-chr12:9875830..9877610,2	K562	blood:
16	chr12:9531253..9531816-chr12:9860516..9861214,2	MCF-7	breast:
17	chr12:9798330..9801052-chr12:9860989..9864813,3	K562	blood:
18	chr12:9792708..9795930-chr12:9875976..9879286,3	K562	blood:
19	chr12:9786489..9787540-chr12:9860512..9861375,9	MCF-7	breast:
20	chr12:9876110..9878240-chr12:9880296..9883371,3	K562	blood:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CLEC2D-1	chr12:9861468-9861946	ENSG00000256582
2	lnc-CLEC2D-1	chr12:9856673-9856753	ENSG00000256582

No data

Variant related genes	Relation type
CLECL1	TF binding region
ENSG00000256582	TF binding region
CLECL1	CpG island
ENSG00000256582	CpG island
ENSG00000069493	chromatin interactions
ENSG00000256594	chromatin interactions
ENSG00000256442	chromatin interactions
ENSG00000184293	chromatin interactions
ENSG00000233719	chromatin interactions
ENSG00000272917	chromatin interactions

Extended variants
information (count: 840 )
Associated
traits (count: 82 )

Variant overlapped rSNPs/rCNVs (count:840 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11052552	chr12:9855958-9855959	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance disease
2	rs373528618	chr12:9855971-9855972	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs142134045	chr12:9855972-9855973	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs60257093	chr12:9856008-9856009	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs114927737	chr12:9856149-9856150	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs67429242	chr12:9856207-9856208	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs192574099	chr12:9856254-9856255	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs66725265	chr12:9856266-9856267	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs71441764	chr12:9856322-9856323	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs189517266	chr12:9856327-9856328	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs371172856	chr12:9856329-9856330	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs140178357	chr12:9856330-9856331	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs141820021	chr12:9856365-9856366	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs555512321	chr12:9856441-9856442	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs12371981	chr12:9856442-9856443	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
16	rs12371982	chr12:9856484-9856485	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
17	rs114970683	chr12:9856497-9856498	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs576428950	chr12:9856501-9856502	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs545821227	chr12:9856550-9856551	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
20	rs35095666	chr12:9856552-9856553	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs140912809	chr12:9856553-9856554	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs192423964	chr12:9856559-9856560	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
23	rs184427234	chr12:9856570-9856571	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
24	rs190119190	chr12:9856634-9856635	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs181324764	chr12:9856666-9856667	Weak transcription Enhancers	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs556423475	chr12:9856757-9856758	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs34649337	chr12:9856806-9856807	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs71450679	chr12:9856808-9856809	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs371496093	chr12:9856809-9856810	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs116565694	chr12:9856825-9856826	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs12370579	chr12:9856826-9856827	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs369107596	chr12:9856937-9856938	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs114787328	chr12:9856938-9856939	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs77389972	chr12:9856968-9856969	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs150461757	chr12:9856981-9856982	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs368347233	chr12:9856994-9856995	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs184717369	chr12:9857079-9857080	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs35427339	chr12:9857118-9857119	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs370967431	chr12:9857173-9857174	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs373635549	chr12:9857229-9857230	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs114904306	chr12:9857262-9857263	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs138250246	chr12:9857341-9857342	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs148861354	chr12:9857446-9857447	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs116520594	chr12:9857476-9857477	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs115968994	chr12:9857518-9857519	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs114624385	chr12:9857528-9857529	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs143496602	chr12:9857581-9857582	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs549862342	chr12:9857586-9857587	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs386760203	chr12:9857627-9857628	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs10734809	chr12:9857628-9857629	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:82)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Epilepsy	21858020	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
craniofacial dysmorphism	21918468	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Alzheimer''s disease	17160897	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21611746	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Autism	20531469	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:415 , 50 per page) page: 1 2 3 4 5 6 7 ... 9

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:9840600-9864600	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr12:9841800-9863200	Weak transcription	HSMMtube	muscle
3	chr12:9844200-9860600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr12:9847600-9860000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr12:9848200-9860200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr12:9848400-9860200	Weak transcription	Duodenum Mucosa	Duodenum
7	chr12:9848600-9859400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr12:9849800-9860600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr12:9852200-9856400	Enhancers	Primary B cells from peripheral blood	blood
10	chr12:9852600-9856600	Enhancers	Primary T helper cells fromperipheralblood	blood
11	chr12:9853000-9856200	Enhancers	Primary B cells from cord blood	blood
12	chr12:9853400-9858400	Weak transcription	Primary monocytes fromperipheralblood	blood
13	chr12:9853400-9858400	Weak transcription	Monocytes-CD14+_RO01746	blood
14	chr12:9854600-9860000	Weak transcription	Left Ventricle	heart
15	chr12:9854800-9860000	Weak transcription	Spleen	Spleen
16	chr12:9855000-9856400	Enhancers	Primary T cells fromperipheralblood	blood
17	chr12:9855000-9856600	Enhancers	Primary T killer memory cells from peripheral blood	blood
18	chr12:9855000-9857000	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
19	chr12:9855000-9857400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
20	chr12:9855000-9860200	Enhancers	Primary T cells from cord blood	blood
21	chr12:9855200-9856600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
22	chr12:9855200-9856800	Enhancers	Primary T helper cells PMA-I stimulated	--
23	chr12:9855200-9858800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
24	chr12:9855200-9860000	Weak transcription	Esophagus	oesophagus
25	chr12:9855400-9856400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
26	chr12:9855400-9856400	Enhancers	Dnd41	blood
27	chr12:9855400-9858600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
28	chr12:9855600-9856000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
29	chr12:9855600-9856000	Weak transcription	Fetal Thymus	thymus
30	chr12:9855600-9858200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
31	chr12:9855600-9860200	Enhancers	Primary T helper naive cells from peripheral blood	blood
32	chr12:9855600-9860600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
33	chr12:9855600-9862800	Weak transcription	Primary hematopoietic stem cells	blood
34	chr12:9855800-9858600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
35	chr12:9855800-9858600	Weak transcription	Thymus	Thymus
36	chr12:9856000-9856200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
37	chr12:9856000-9856200	Enhancers	Fetal Thymus	thymus
38	chr12:9856200-9858000	Weak transcription	Primary B cells from cord blood	blood
39	chr12:9856200-9860000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
40	chr12:9856200-9860000	Weak transcription	Fetal Thymus	thymus
41	chr12:9856400-9857600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
42	chr12:9856400-9858600	Weak transcription	Primary T cells fromperipheralblood	blood
43	chr12:9856400-9858600	Weak transcription	Dnd41	blood
44	chr12:9856600-9857200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
45	chr12:9856600-9857800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
46	chr12:9856600-9858000	Weak transcription	Primary T helper cells fromperipheralblood	blood
47	chr12:9856800-9858000	Weak transcription	Primary T helper cells PMA-I stimulated	--
48	chr12:9857000-9858000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
49	chr12:9857200-9858600	Enhancers	Primary T helper naive cells fromperipheralblood	blood
50	chr12:9857400-9858600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links