Variant report

Variant	esv2757959
Chromosome Location	chr4:142065661-142367951
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3064)
CpG islands
(count:1223)
Chromatin interactive
region (count:130)
LncRNA
region (count:16)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3064 , 50 per page) page: 1 2 3 4 5 6 7 ... 62

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr4:142141935-142142790	HepG2	liver:	n/a	n/a
2	ARID3A	chr4:142079603-142079667	HepG2	liver:	n/a	n/a
3	ARID3A	chr4:142142474-142143078	K562	blood:	n/a	n/a
4	ATF1	chr4:142075982-142076181	K562	blood:	n/a	n/a
5	ATF1	chr4:142273518-142273854	K562	blood:	n/a	n/a
6	ATF1	chr4:142274174-142274575	K562	blood:	n/a	n/a
7	ATF1	chr4:142141514-142142237	K562	blood:	n/a	n/a
8	ATF2	chr4:142141727-142142946	GM12878	blood:	n/a	n/a
9	ATF2	chr4:142230960-142231486	GM12878	blood:	n/a	n/a
10	ATF2	chr4:142228294-142228890	GM12878	blood:	n/a	n/a
11	ATF2	chr4:142228239-142228935	GM12878	blood:	n/a	n/a
12	ATF2	chr4:142225467-142225814	GM12878	blood:	n/a	n/a
13	ATF2	chr4:142141768-142142303	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr4:142141799-142142267	GM12878	blood:	n/a	n/a
15	ATF2	chr4:142141766-142142263	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr4:142230849-142231471	GM12878	blood:	n/a	n/a
17	ATF3	chr4:142141916-142142173	HepG2	liver:	n/a	chr4:142142025-142142038 chr4:142142027-142142038 chr4:142142028-142142035 chr4:142142025-142142035 chr4:142142025-142142035 chr4:142142024-142142037 chr4:142142025-142142038 chr4:142142026-142142037 chr4:142142025-142142036 chr4:142142024-142142039 chr4:142142027-142142035
18	ATF3	chr4:142141885-142142214	K562	blood:	n/a	chr4:142142025-142142038 chr4:142142027-142142038 chr4:142142028-142142035 chr4:142142025-142142035 chr4:142142025-142142035 chr4:142142024-142142037 chr4:142142025-142142038 chr4:142142026-142142037 chr4:142142025-142142036 chr4:142142024-142142039 chr4:142142027-142142035
19	ATF3	chr4:142271128-142271654	A549	lung:	n/a	n/a
20	ATF3	chr4:142141822-142142552	GM12878	blood:	n/a	chr4:142142025-142142038 chr4:142142027-142142038 chr4:142142028-142142035 chr4:142142025-142142035 chr4:142142025-142142035 chr4:142142024-142142037 chr4:142142025-142142038 chr4:142142026-142142037 chr4:142142025-142142036 chr4:142142024-142142039 chr4:142142027-142142035
21	ATF3	chr4:142141884-142142211	H1-hESC	embryonic stem cell:	n/a	chr4:142142025-142142038 chr4:142142027-142142038 chr4:142142028-142142035 chr4:142142025-142142035 chr4:142142025-142142035 chr4:142142024-142142037 chr4:142142025-142142038 chr4:142142026-142142037 chr4:142142025-142142036 chr4:142142024-142142039 chr4:142142027-142142035
22	ATF3	chr4:142271271-142271726	A549	lung:	n/a	n/a
23	ATF3	chr4:142075932-142076256	K562	blood:	n/a	chr4:142076115-142076130 chr4:142076116-142076129
24	ATF3	chr4:142141800-142142233	H1-hESC	embryonic stem cell:	n/a	chr4:142142025-142142038 chr4:142142027-142142038 chr4:142142028-142142035 chr4:142142025-142142035 chr4:142142025-142142035 chr4:142142024-142142037 chr4:142142025-142142038 chr4:142142026-142142037 chr4:142142025-142142036 chr4:142142024-142142039 chr4:142142027-142142035
25	BACH1	chr4:142142033-142142253	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr4:142252714-142253010	K562	blood:	n/a	n/a
27	BACH1	chr4:142145736-142145834	K562	blood:	n/a	n/a
28	BACH1	chr4:142151055-142151088	K562	blood:	n/a	n/a
29	BATF	chr4:142293784-142293949	GM12878	blood:	n/a	n/a
30	BATF	chr4:142293763-142293961	GM12878	blood:	n/a	n/a
31	BATF	chr4:142231062-142231358	GM12878	blood:	n/a	n/a
32	BATF	chr4:142128509-142128822	GM12878	blood:	n/a	n/a
33	BATF	chr4:142225485-142225871	GM12878	blood:	n/a	chr4:142225692-142225703 chr4:142225697-142225707
34	BATF	chr4:142225483-142225806	GM12878	blood:	n/a	chr4:142225692-142225703 chr4:142225697-142225707
35	BATF	chr4:142228324-142228802	GM12878	blood:	n/a	n/a
36	BATF	chr4:142169262-142169425	GM12878	blood:	n/a	n/a
37	BATF	chr4:142128544-142128848	GM12878	blood:	n/a	n/a
38	BCL11A	chr4:142231053-142231338	GM12878	blood:	n/a	n/a
39	BCL11A	chr4:142230948-142231394	GM12878	blood:	n/a	n/a
40	BCL11A	chr4:142228338-142228797	GM12878	blood:	n/a	n/a
41	BCL11A	chr4:142228313-142228892	GM12878	blood:	n/a	n/a
42	BCL3	chr4:142248605-142248833	K562	blood:	n/a	n/a
43	BCL3	chr4:142253576-142253793	K562	blood:	n/a	n/a
44	BCL3	chr4:142271067-142271791	A549	lung:	n/a	n/a
45	BCL3	chr4:142228406-142228737	GM12878	blood:	n/a	n/a
46	BCL3	chr4:142322055-142322342	GM12878	blood:	n/a	n/a
47	BCL3	chr4:142230982-142231359	GM12878	blood:	n/a	n/a
48	BCLAF1	chr4:142228266-142228896	GM12878	blood:	n/a	n/a
49	BCLAF1	chr4:142249567-142250217	K562	blood:	n/a	n/a
50	BCLAF1	chr4:142252412-142253869	K562	blood:	n/a	n/a

(count:1223 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr4:142142038-142142088	AG04449	skin:	fetal
2	chr4:142144530-142144580	MCF10A-Er-Src	breast:	n/a
3	chr4:142353093-142353143	HCPEpiC	choroid plexus:	n/a
4	chr4:142142038-142142088	AG04449	skin:	fetal
5	chr4:142144530-142144580	MCF10A-Er-Src	breast:	n/a
6	chr4:142353093-142353143	HCPEpiC	choroid plexus:	n/a
7	chr4:142353093-142353143	MCF-7	breast:	n/a
8	chr4:142142014-142142064	CMK	blood:	n/a
9	chr4:142134774-142134824	NT2-D1	testis:	n/a
10	chr4:142141972-142142022	GM06990	blood:	n/a
11	chr4:142297721-142297771	RPTEC	kidney:	n/a
12	chr4:142141697-142141747	HEEpiC	esophagus:	n/a
13	chr4:142141192-142141242	HCM	heart:	n/a
14	chr4:142141972-142142022	HNPCEpiC	eye:	n/a
15	chr4:142228617-142228667	HRPEpiC	eye:	n/a
16	chr4:142142038-142142088	HRPEpiC	eye:	n/a
17	chr4:142142438-142142488	AoSMC	blood vessel:	n/a
18	chr4:142144530-142144580	NT2-D1	testis:	n/a
19	chr4:142297721-142297771	SK-N-SH_RA	brain:	n/a
20	chr4:142141697-142141747	IMR90	lung:	fetal
21	chr4:142141192-142141242	U87	brain:	n/a
22	chr4:142141984-142142034	HMEC	breast:	n/a
23	chr4:142253700-142253750	GM12892	blood:	n/a
24	chr4:142249864-142249914	PANC-1	pancreas:	n/a
25	chr4:142253700-142253750	MCF-7	breast:	n/a
26	chr4:142353093-142353143	AoSMC	blood vessel:	n/a
27	chr4:142353093-142353143	MCF10A-Er-Src	breast:	n/a
28	chr4:142134774-142134824	PANC-1	pancreas:	n/a
29	chr4:142142014-142142064	MCF10A-Er-Src	breast:	n/a
30	chr4:142249864-142249914	HIPEpiC	eye:	n/a
31	chr4:142141984-142142034	PrEC	prostate:	n/a
32	chr4:142142045-142142095	BJ	skin:	n/a
33	chr4:142142038-142142088	HEEpiC	esophagus:	n/a
34	chr4:142144530-142144580	GM12892	blood:	n/a
35	chr4:142249864-142249914	SK-N-SH	brain:	n/a
36	chr4:142134893-142134943	HNPCEpiC	eye:	n/a
37	chr4:142142166-142142216	HCF	heart:	n/a
38	chr4:142134774-142134824	HPAEpiC	pulmonary alveolar:	n/a
39	chr4:142142045-142142095	Hepatocyte	liver:	n/a
40	chr4:142297721-142297771	K562	blood:	n/a
41	chr4:142249864-142249914	Hela-S3	cervix:	n/a
42	chr4:142155291-142155341	GM19239	blood:	n/a
43	chr4:142353093-142353143	NH-A	brain:	n/a
44	chr4:142141697-142141747	AG10803	skin:	n/a
45	chr4:142142038-142142088	GM12891	blood:	n/a
46	chr4:142141972-142142022	K562	blood:	n/a
47	chr4:142142274-142142324	HAEpiC	amniotic membrane:	n/a
48	chr4:142228617-142228667	AG04449	skin:	fetal
49	chr4:142144530-142144580	AoSMC	blood vessel:	n/a
50	chr4:142134774-142134824	NHDF-neo	bronchial:	n/a

(count:130 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr4:142264427..142267290-chr4:142271657..142274374,2	K562	blood:
2	chr4:142161374..142163466-chr4:142167026..142168820,2	K562	blood:
3	chr4:142238573..142240145-chr4:142249869..142252325,2	MCF-7	breast:
4	chr4:142238509..142241049-chr4:142259317..142261670,2	K562	blood:
5	chr4:142261368..142264088-chr4:142272060..142274343,2	K562	blood:
6	chr4:142220674..142222220-chr4:142239442..142241606,2	K562	blood:
7	chr4:142198221..142199748-chr4:142201608..142203803,2	K562	blood:
8	chr4:142223496..142225968-chr4:142226555..142229787,3	K562	blood:
9	chr4:142141223..142142982-chr4:142250802..142253711,2	K562	blood:
10	chr4:142151895..142154437-chr4:142247980..142250422,2	K562	blood:
11	chr4:142116253..142118319-chr4:142120950..142123084,2	K562	blood:
12	chr4:142140626..142144064-chr4:142151418..142153859,4	MCF-7	breast:
13	chr4:142165772..142167294-chr4:142167757..142170568,2	K562	blood:
14	chr4:142227407..142229215-chr4:142236190..142237772,2	K562	blood:
15	chr4:142251499..142254642-chr4:142267265..142269320,4	K562	blood:
16	chr4:142142382..142144956-chr4:142145534..142149022,4	MCF-7	breast:
17	chr4:142147670..142151486-chr4:142153035..142157398,7	K562	blood:
18	chr4:142070131..142073130-chr4:142247231..142250197,2	K562	blood:
19	chr4:142249413..142251647-chr4:144107671..144110425,2	K562	blood:
20	chr4:142198221..142199748-chr4:142201608..142203803,2	K562	blood:
21	chr4:142229401..142231764-chr4:142233130..142234900,2	K562	blood:
22	chr4:142156458..142159953-chr4:142166244..142169936,4	K562	blood:
23	chr4:142258318..142261714-chr4:142265354..142269048,5	K562	blood:
24	chr4:142078200..142080660-chr4:142247677..142250766,3	K562	blood:
25	chr4:142248968..142250827-chr4:144195505..144197291,2	K562	blood:
26	chr4:142268352..142269986-chr4:142269997..142272085,2	MCF-7	breast:
27	chr4:142161374..142163466-chr4:142167026..142168820,2	K562	blood:
28	chr4:142262325..142264691-chr4:142266490..142269066,3	K562	blood:
29	chr4:142053277..142055129-chr4:142140562..142142669,2	MCF-7	breast:
30	chr4:142168980..142172575-chr4:142247143..142249869,3	K562	blood:
31	chr4:142228387..142228929-chr4:142632549..142633118,2	MCF-7	breast:
32	chr4:142262325..142264691-chr4:142266490..142269066,3	K562	blood:
33	chr4:142079370..142080051-chr4:142632096..142632707,2	MCF-7	breast:
34	chr4:142071268..142073087-chr4:142251176..142252927,2	K562	blood:
35	chr4:142150167..142154437-chr4:142247980..142250502,4	K562	blood:
36	chr4:142143487..142146367-chr4:142238694..142241101,2	K562	blood:
37	chr4:142151524..142153740-chr4:142155253..142157789,3	K562	blood:
38	chr4:142070738..142073087-chr4:142250594..142253709,3	K562	blood:
39	chr4:142140429..142142845-chr4:142246599..142248409,2	K562	blood:
40	chr4:142144194..142146374-chr4:142152131..142154462,2	MCF-7	breast:
41	chr4:142226878..142228627-chr4:142250493..142252020,2	K562	blood:
42	chr19:9545942..9546495-chr4:142142066..142143053,2	Hela-S3	cervix:
43	chr4:142228295..142229940-chr4:142492695..142494896,2	K562	blood:
44	chr4:142295670..142297489-chr4:142636919..142639486,2	MCF-7	breast:
45	chr4:142150077..142152832-chr4:142160080..142162137,2	K562	blood:
46	chr4:142141578..142144427-chr4:142167621..142170432,3	K562	blood:
47	chr4:142071268..142073087-chr4:142251176..142252927,2	K562	blood:
48	chr4:142233427..142235832-chr4:142247166..142249563,2	K562	blood:
49	chr4:142142186..142143758-chr4:142159859..142162122,2	K562	blood:
50	chr4:142134915..142136883-chr4:142140980..142143686,3	K562	blood:

(count:16 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF330-3	chr4:142264880-142265230	NONHSAT098526
2	lnc-RNF150-2	chr4:142244576-142244716	ENSG00000248810
3	lnc-RNF150-1	chr4:142199598-142199943	XLOC_004102
4	lnc-ZNF330-2	chr4:142129715-142130140	NONHSAT098517
5	lnc-ZNF330-2	chr4:142128797-142130411	NONHSAT098516
6	lnc-RNF150-2	chr4:142242283-142242535	ENSG00000248810
7	lnc-ZNF330-4	chr4:142326326-142328740	NONHSAT098527
8	lnc-ZNF330-2	chr4:142133211-142133249	NONHSAT098517
9	lnc-ZNF330-5	chr4:142351926-142352238	NONHSAT098528
10	lnc-ZNF330-5	chr4:142350813-142351187	NONHSAT098528
11	lnc-ZNF330-3	chr4:142264028-142264398	NONHSAT098526
12	lnc-RNF150-2	chr4:142240604-142241054	ENSG00000248810
13	lnc-RNF150-2	chr4:142244576-142247161	ENSG00000248810
14	lnc-RNF150-1	chr4:142161893-142162483	XLOC_004102
15	lnc-ZNF330-5	chr4:142351985-142352438	ENSG00000272632.1
16	lnc-RNF150-1	chr4:142195495-142195594	XLOC_004102

No data

Variant related genes	Relation type
ENSG00000250189	TF binding region
ENSG00000272632	TF binding region
RNF150	TF binding region
ENSG00000238695	TF binding region
ENSG00000248810	TF binding region
ENSG00000248747	TF binding region
ZNF330	TF binding region
ENSG00000250189	CpG island
ENSG00000272632	CpG island
RNF150	CpG island
ENSG00000238695	CpG island
ENSG00000248810	CpG island
ENSG00000248747	CpG island
ZNF330	CpG island
ENSG00000248810	chromatin interactions
ENSG00000250189	chromatin interactions
ENSG00000270103	chromatin interactions
ENSG00000238695	chromatin interactions
ENSG00000170153	chromatin interactions
ENSG00000174652	chromatin interactions
ENSG00000109445	chromatin interactions
MYB	miRNA target sites
MAPT	miRNA target sites
CCNE2	miRNA target sites

Extended variants
information (count: 7690 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:7690 , 50 per page) page: 1 2 3 4 5 6 7 ... 154

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs572378005	chr4:142065695-142065696	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs112922610	chr4:142065711-142065712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs57532703	chr4:142065765-142065766	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs548613391	chr4:142065776-142065777	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs563737867	chr4:142065779-142065780	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs531050471	chr4:142065850-142065851	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs371764210	chr4:142065866-142065867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs181698507	chr4:142065883-142065884	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs34216673	chr4:142065893-142065894	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs57699012	chr4:142065918-142065919	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs184111821	chr4:142065932-142065933	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs111514461	chr4:142065987-142065988	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs547027215	chr4:142066049-142066050	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs561588121	chr4:142066132-142066133	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs568736931	chr4:142066138-142066139	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs139381839	chr4:142066178-142066179	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs556552599	chr4:142066179-142066180	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs368643074	chr4:142066201-142066202	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs574963077	chr4:142066250-142066251	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs3851434	chr4:142066279-142066280	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs75918126	chr4:142066330-142066331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs75881995	chr4:142066473-142066474	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs80052192	chr4:142066474-142066475	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs77298883	chr4:142066475-142066476	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs76704715	chr4:142066476-142066477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs572630235	chr4:142066487-142066488	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs572994017	chr4:142066490-142066491	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs570708782	chr4:142066491-142066492	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs540518141	chr4:142066526-142066527	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs561795158	chr4:142066548-142066549	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs573895334	chr4:142066582-142066583	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs540838609	chr4:142066601-142066602	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs10519586	chr4:142066636-142066637	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
34	rs188747665	chr4:142066661-142066662	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs531013607	chr4:142066662-142066663	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs553041667	chr4:142066729-142066730	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs546362107	chr4:142066737-142066738	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs112476212	chr4:142066743-142066744	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs201939883	chr4:142066753-142066754	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs4956520	chr4:142066755-142066756	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
41	rs547178799	chr4:142066813-142066814	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs4956348	chr4:142066826-142066827	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
43	rs144157948	chr4:142066882-142066883	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs550137338	chr4:142066898-142066899	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs530556863	chr4:142066962-142066963	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs7664315	chr4:142066976-142066977	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs376706019	chr4:142066986-142066987	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs146417591	chr4:142066989-142066990	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs180777147	chr4:142067040-142067041	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs140825726	chr4:142067068-142067069	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Acute lymphoblastic leukemia	22237106	CNVD
Glioblastoma multiforme	21080181	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
HIV/AIDS	22032296	CNVD
Medulloblastoma	21979893	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21858162	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Gastric cancer	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	17603634	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Colorectal cancer	19359472	CNVD
Malignant mesothelioma	18160781	CNVD
Medulloblastoma	18056178	CNVD
Multiple myeloma	17077331	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Oral squamous cell carcinoma	17134496	CNVD
4q-syndrome	17576883	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Muscular dystrophy	21149563	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Cervical cancer	21062161	CNVD
Metanephric adenoma	20802469	CNVD
Breast cancer	16608533	CNVD
Lung cancer	19208797	CNVD
Wilms tumour	21544195	CNVD
Breast cancer	21785460	CNVD
Lung cancer	18438408	CNVD
Cancer	22429812	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	21183584	CNVD
primary effusion lymphomas	17116491	CNVD
Breast cancer	16272173	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	17133270	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital anomalies of the kidney and urinary tract	20505237	CNVD
Breast cancer	17393978	CNVD
Esophageal cancer	21851588	CNVD
Testicular germ cell tumor	18059402	CNVD
Ovarian cancer	22174824	CNVD
Olfactory neuroblastoma	18408657	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Mental retardation	17901693	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Prostate cancer	18632612	CNVD
Ewing''s sarcoma	17952124	CNVD
Obesity	20622171	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Breast cancer	22048815	CNVD
Autism	22241247	CNVD
Glioblastoma multiforme	22286061	CNVD
Glioblastoma multiforme	21510904	CNVD
Intellectual disability	21811512	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1932 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:142062400-142066600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr4:142062600-142066800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr4:142066600-142067200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr4:142066800-142068400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr4:142067200-142067600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
6	chr4:142067600-142068400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
7	chr4:142074400-142076000	Enhancers	Pancreatic Islets	Pancreatic Islet
8	chr4:142074800-142076800	Enhancers	Fetal Heart	heart
9	chr4:142075000-142075800	Enhancers	Duodenum Smooth Muscle	Duodenum
10	chr4:142075000-142076200	Enhancers	Rectal Smooth Muscle	rectum
11	chr4:142075000-142076200	Enhancers	K562	blood
12	chr4:142075200-142075800	Enhancers	Liver	Liver
13	chr4:142075400-142075800	Enhancers	Ovary	ovary
14	chr4:142075600-142076000	Enhancers	Colon Smooth Muscle	Colon
15	chr4:142075800-142076800	Weak transcription	Ovary	ovary
16	chr4:142075800-142077400	Enhancers	NH-A	brain
17	chr4:142076000-142079600	Weak transcription	Colon Smooth Muscle	Colon
18	chr4:142076400-142076600	Enhancers	Muscle Satellite Cultured Cells	--
19	chr4:142076400-142077400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr4:142076600-142077000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
21	chr4:142076600-142077000	Enhancers	HSMM	muscle
22	chr4:142076600-142077400	Enhancers	HSMMtube	muscle
23	chr4:142076800-142077000	Enhancers	Ovary	ovary
24	chr4:142076800-142077400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
25	chr4:142077000-142077200	Enhancers	Muscle Satellite Cultured Cells	--
26	chr4:142077400-142078600	Weak transcription	HSMMtube	muscle
27	chr4:142078600-142078800	Enhancers	HSMMtube	muscle
28	chr4:142079600-142080400	Enhancers	Colon Smooth Muscle	Colon
29	chr4:142080000-142080400	Enhancers	Fetal Lung	lung
30	chr4:142080000-142080400	Enhancers	Fetal Stomach	stomach
31	chr4:142081200-142081600	Enhancers	HUVEC	blood vessel
32	chr4:142091800-142092600	Enhancers	Fetal Lung	lung
33	chr4:142092000-142092800	Enhancers	Fetal Stomach	stomach
34	chr4:142094200-142097200	Enhancers	Monocytes-CD14+_RO01746	blood
35	chr4:142094600-142094800	Enhancers	Fetal Muscle Leg	muscle
36	chr4:142094800-142095800	Weak transcription	Fetal Muscle Leg	muscle
37	chr4:142094800-142097200	Enhancers	Primary monocytes fromperipheralblood	blood
38	chr4:142095800-142096400	Enhancers	Fetal Muscle Leg	muscle
39	chr4:142101200-142101600	Bivalent Enhancer	IMR90 fetal lung fibroblasts Cell Line	lung
40	chr4:142101800-142103200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr4:142102200-142103200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr4:142109800-142110200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
43	chr4:142109800-142110600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr4:142111400-142112200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr4:142113800-142114600	Enhancers	Skeletal Muscle Female	skeletal muscle
46	chr4:142113800-142117000	Enhancers	Skeletal Muscle Male	skeletal muscle
47	chr4:142114600-142115800	Weak transcription	Skeletal Muscle Female	skeletal muscle
48	chr4:142115800-142118000	Enhancers	Skeletal Muscle Female	skeletal muscle
49	chr4:142116000-142116200	Enhancers	Liver	Liver
50	chr4:142116000-142116800	Enhancers	Adipose Nuclei	Adipose

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links