Variant report

Variant	esv2758094
Chromosome Location	chr6:167501204-167845935
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:5707)
CpG islands
(count:10872)
Chromatin interactive
region (count:89)
LncRNA
region (count:43)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:5707 , 50 per page) page: 1 2 3 4 5 6 7 ... 115

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:167754780-167756165	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:167702230-167702578	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:167652605-167653007	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:167554236-167555094	HepG2	liver:	n/a	n/a
5	ARID3A	chr6:167628930-167629130	HepG2	liver:	n/a	n/a
6	ARID3A	chr6:167655013-167655211	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:167544586-167544925	HepG2	liver:	n/a	n/a
8	ARID3A	chr6:167629415-167629646	HepG2	liver:	n/a	n/a
9	ARID3A	chr6:167837621-167838022	HepG2	liver:	n/a	n/a
10	ARID3A	chr6:167651727-167651738	HepG2	liver:	n/a	n/a
11	ARID3A	chr6:167536241-167537214	HepG2	liver:	n/a	n/a
12	ARID3A	chr6:167809998-167810531	HepG2	liver:	n/a	n/a
13	ARID3A	chr6:167723215-167724601	HepG2	liver:	n/a	n/a
14	ARID3A	chr6:167704338-167705733	HepG2	liver:	n/a	n/a
15	ARID3A	chr6:167722138-167722657	HepG2	liver:	n/a	n/a
16	ARID3A	chr6:167762709-167763005	HepG2	liver:	n/a	n/a
17	ARID3A	chr6:167834911-167835243	HepG2	liver:	n/a	n/a
18	ARID3A	chr6:167632046-167632420	HepG2	liver:	n/a	n/a
19	ARID3A	chr6:167637599-167638030	HepG2	liver:	n/a	n/a
20	ARID3A	chr6:167682223-167682912	HepG2	liver:	n/a	n/a
21	ARID3A	chr6:167629887-167630151	HepG2	liver:	n/a	n/a
22	ARID3A	chr6:167624462-167624811	HepG2	liver:	n/a	n/a
23	ARID3A	chr6:167811767-167812223	HepG2	liver:	n/a	n/a
24	ARID3A	chr6:167699867-167700232	HepG2	liver:	n/a	n/a
25	ARID3A	chr6:167645950-167646149	HepG2	liver:	n/a	n/a
26	ARID3A	chr6:167633428-167633974	HepG2	liver:	n/a	n/a
27	ATF1	chr6:167538302-167538600	K562	blood:	n/a	n/a
28	ATF1	chr6:167513659-167514463	K562	blood:	n/a	n/a
29	ATF1	chr6:167727339-167727444	K562	blood:	n/a	n/a
30	ATF1	chr6:167702337-167702425	K562	blood:	n/a	n/a
31	ATF2	chr6:167560274-167560920	H1-hESC	embryonic stem cell:	n/a	n/a
32	ATF2	chr6:167625939-167626508	GM12878	blood:	n/a	n/a
33	ATF2	chr6:167764830-167765266	H1-hESC	embryonic stem cell:	n/a	n/a
34	ATF2	chr6:167526259-167528702	GM12878	blood:	n/a	chr6:167528159-167528170
35	ATF2	chr6:167560330-167560930	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF2	chr6:167566874-167567462	GM12878	blood:	n/a	n/a
37	ATF2	chr6:167526348-167528528	GM12878	blood:	n/a	chr6:167528159-167528170
38	ATF2	chr6:167543402-167543914	GM12878	blood:	n/a	n/a
39	ATF2	chr6:167512260-167512713	GM12878	blood:	n/a	n/a
40	ATF2	chr6:167566134-167567505	GM12878	blood:	n/a	n/a
41	ATF2	chr6:167564311-167565240	GM12878	blood:	n/a	n/a
42	ATF2	chr6:167641353-167641826	H1-hESC	embryonic stem cell:	n/a	n/a
43	ATF2	chr6:167502680-167503061	GM12878	blood:	n/a	n/a
44	ATF2	chr6:167506059-167506667	GM12878	blood:	n/a	n/a
45	ATF2	chr6:167764810-167765270	H1-hESC	embryonic stem cell:	n/a	n/a
46	ATF2	chr6:167564561-167565094	H1-hESC	embryonic stem cell:	n/a	n/a
47	ATF2	chr6:167564501-167565096	GM12878	blood:	n/a	n/a
48	ATF2	chr6:167576782-167577257	H1-hESC	embryonic stem cell:	n/a	n/a
49	ATF2	chr6:167512312-167512817	GM12878	blood:	n/a	n/a
50	ATF2	chr6:167566160-167566818	GM12878	blood:	n/a	n/a

(count:10872 , 50 per page) page: 1 2 3 4 5 6 7 ... 218

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:167753807-167753857	SAEC	small airway:	n/a
2	chr6:167536063-167536113	HEEpiC	esophagus:	n/a
3	chr6:167536184-167536234	AG09319	gingival:	n/a
4	chr6:167634139-167634189	HNPCEpiC	eye:	n/a
5	chr6:167560504-167560554	NHBE	bronchial:	n/a
6	chr6:167738425-167738475	HCPEpiC	choroid plexus:	n/a
7	chr6:167550145-167550195	K562	blood:	n/a
8	chr6:167764146-167764196	Hepatocyte	liver:	n/a
9	chr6:167791114-167791164	SK-N-MC	brain:	n/a
10	chr6:167536184-167536234	LNCaP	prostate:	n/a
11	chr6:167705750-167705800	HCM	heart:	n/a
12	chr6:167511486-167511536	HL-60	blood:	n/a
13	chr6:167786059-167786109	HNPCEpiC	eye:	n/a
14	chr6:167560504-167560554	ovcar-3	ovarian:	n/a
15	chr6:167753807-167753857	SAEC	small airway:	n/a
16	chr6:167536063-167536113	HEEpiC	esophagus:	n/a
17	chr6:167536184-167536234	AG09319	gingival:	n/a
18	chr6:167634139-167634189	HNPCEpiC	eye:	n/a
19	chr6:167560504-167560554	NHBE	bronchial:	n/a
20	chr6:167738425-167738475	HCPEpiC	choroid plexus:	n/a
21	chr6:167550145-167550195	K562	blood:	n/a
22	chr6:167764146-167764196	Hepatocyte	liver:	n/a
23	chr6:167791114-167791164	SK-N-MC	brain:	n/a
24	chr6:167536184-167536234	LNCaP	prostate:	n/a
25	chr6:167705750-167705800	HCM	heart:	n/a
26	chr6:167511486-167511536	HL-60	blood:	n/a
27	chr6:167786059-167786109	HNPCEpiC	eye:	n/a
28	chr6:167560504-167560554	ovcar-3	ovarian:	n/a
29	chr6:167836221-167836271	A549	lung:	n/a
30	chr6:167710360-167710410	NB4	blood:	n/a
31	chr6:167586206-167586256	NB4	blood:	n/a
32	chr6:167680455-167680505	ProgFib	skin:	n/a
33	chr6:167504864-167504914	Hepatocyte	liver:	n/a
34	chr6:167764523-167764573	Jurkat	blood:	n/a
35	chr6:167834866-167834916	ovcar-3	ovarian:	n/a
36	chr6:167717196-167717246	HL-60	blood:	n/a
37	chr6:167717196-167717246	BE2_C	brain:	n/a
38	chr6:167763819-167763869	HEK293	kidney:	embryo
39	chr6:167529678-167529728	AoSMC	blood vessel:	n/a
40	chr6:167791114-167791164	GM12878	blood:	n/a
41	chr6:167571324-167571374	HEEpiC	esophagus:	n/a
42	chr6:167633022-167633072	AG09319	gingival:	n/a
43	chr6:167529678-167529728	HAEpiC	amniotic membrane:	n/a
44	chr6:167734054-167734104	HCPEpiC	choroid plexus:	n/a
45	chr6:167550205-167550255	GM19239	blood:	n/a
46	chr6:167764620-167764670	HEK293	kidney:	embryo
47	chr6:167705253-167705303	Hepatocyte	liver:	n/a
48	chr6:167792741-167792791	MCF-7	breast:	n/a
49	chr6:167753807-167753857	HAEpiC	amniotic membrane:	n/a
50	chr6:167700000-167700050	NB4	blood:	n/a

(count:89 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:167623779..167626117-chr6:167629928..167632260,2	MCF-7	breast:
2	chr6:167818746..167821496-chr6:167831177..167833070,2	K562	blood:
3	chr6:167459004..167459905-chr6:167555024..167555917,3	MCF-7	breast:
4	chr6:167734899..167737753-chr6:167743376..167745822,2	MCF-7	breast:
5	chr6:167662535..167665478-chr6:167668701..167671430,2	K562	blood:
6	chr6:167636874..167638495-chr6:167694115..167696567,2	K562	blood:
7	chr6:167668192..167671777-chr6:167684157..167687082,3	K562	blood:
8	chr6:167573482..167576354-chr6:167702662..167705429,2	K562	blood:
9	chr6:167188755..167189454-chr6:167555413..167556221,2	MCF-7	breast:
10	chr6:167515250..167516810-chr6:167519372..167521331,2	K562	blood:
11	chr6:167571310..167572911-chr6:167574419..167576239,2	K562	blood:
12	chr6:167515250..167516810-chr6:167519372..167521331,2	K562	blood:
13	chr6:167514002..167514845-chr6:167533614..167534539,2	MCF-7	breast:
14	chr6:167669951..167671777-chr6:167683631..167687000,3	K562	blood:
15	chr6:167736614..167738249-chr6:167740426..167742938,2	K562	blood:
16	chr6:167514528..167517115-chr6:167518866..167520880,2	MCF-7	breast:
17	chr6:167702039..167702568-chr6:167764606..167765474,2	MCF-7	breast:
18	chr6:167623779..167626117-chr6:167629928..167632260,2	MCF-7	breast:
19	chr6:167662535..167665478-chr6:167668701..167671430,2	K562	blood:
20	chr6:167533573..167534443-chr6:167549334..167550301,3	MCF-7	breast:
21	chr6:167631565..167632072-chr6:167702069..167702692,3	K562	blood:
22	chr6:167743283..167745523-chr6:167751106..167753120,2	K562	blood:
23	chr6:167519100..167521232-chr6:167535131..167537207,2	K562	blood:
24	chr6:167536255..167537788-chr6:167539934..167541454,2	K562	blood:
25	chr6:167703616..167705764-chr6:167717598..167719278,2	MCF-7	breast:
26	chr6:167533925..167534442-chr6:167554372..167555227,2	MCF-7	breast:
27	chr6:167185783..167186302-chr6:167555369..167556350,2	K562	blood:
28	chr6:167530846..167533349-chr6:167533846..167535491,2	K562	blood:
29	chr6:167813417..167815135-chr6:167817698..167819518,2	K562	blood:
30	chr6:167543795..167547055-chr6:167549259..167552787,3	K562	blood:
31	chr1:28836187..28837925-chr6:167694572..167696254,2	K562	blood:
32	chr6:167533925..167534442-chr6:167554372..167555227,2	MCF-7	breast:
33	chr6:167734899..167737753-chr6:167743376..167745822,2	MCF-7	breast:
34	chr6:167743283..167745523-chr6:167751106..167753120,2	K562	blood:
35	chr6:167530415..167533348-chr6:167542772..167545436,2	K562	blood:
36	chr6:167533573..167534443-chr6:167549334..167550301,3	MCF-7	breast:
37	chr6:167615262..167616947-chr6:167733556..167735117,2	MCF-7	breast:
38	chr6:167187967..167188932-chr6:167764453..167765086,2	K562	blood:
39	chr6:167514528..167517115-chr6:167518866..167520880,2	MCF-7	breast:
40	chr6:167187969..167188996-chr6:167555512..167556325,4	MCF-7	breast:
41	chr6:167631751..167632287-chr6:167701939..167702527,2	MCF-7	breast:
42	chr6:167511835..167514028-chr6:167517104..167518840,2	K562	blood:
43	chr6:167715327..167717333-chr6:167717541..167719931,2	MCF-7	breast:
44	chr6:167702039..167702568-chr6:167764606..167765474,2	MCF-7	breast:
45	chr6:167736614..167738249-chr6:167740426..167742938,2	K562	blood:
46	chr6:167513997..167514603-chr6:167533661..167534449,3	MCF-7	breast:
47	chr6:167631565..167632072-chr6:167702069..167702692,3	K562	blood:
48	chr6:167615262..167616947-chr6:167733556..167735117,2	MCF-7	breast:
49	chr6:167623945..167626187-chr6:168297648..168300373,2	K562	blood:
50	chr6:167411045..167411873-chr6:167555413..167555930,2	MCF-7	breast:

(count:43 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TCP10-1	chr6:167786578-167786848	NONHSAT116097
2	lnc-TCP10-3	chr6:167839445-167839616	ucscGeneNc_uc003qvy_1
3	lnc-CCR6-1	chr6:167575369-167575443	NONHSAT116084
4	lnc-TCP10L2-1	chr6:167578697-167578796	NONHSAT116082
5	lnc-GPR31-5	chr6:167509671-167510205	NONHSAT116081
6	lnc-TCP10-3	chr6:167839733-167839819	ucscGeneNc_uc003qvy_1
7	lnc-CCR6-2	chr6:167584146-167584210	NONHSAT116086
8	lnc-TCP10-3	chr6:167823155-167825466	ucscGeneNc_uc003qvy_1
9	lnc-TCP10-3	chr6:167825862-167825976	ucscGeneNc_uc003qvy_1
10	lnc-CCR6-2	chr6:167584159-167584210	NONHSAT116087
11	lnc-GPR31-2	chr6:167573626-167573961	l_3324_chr6:167571212-167573961_ovary
12	lnc-UNC93A-1	chr6:167659275-167659404	XLOC_005540
13	lnc-GPR31-3	chr6:167583147-167583385	NONHSAT116085
14	lnc-TTLL2-2	chr6:167837702-167837948	NONHSAT116104
15	lnc-CCR6-2	chr6:167590485-167590622	NONHSAT116087
16	lnc-TTLL2-1	chr6:167803650-167803969	XLOC_005541
17	lnc-GPR31-3	chr6:167582786-167583124	NONHSAT116085
18	lnc-UNC93A-3	chr6:167764976-167765446	NONHSAT116095
19	lnc-CCR6-2	chr6:167585632-167586297	NONHSAT116086
20	lnc-GPR31-3	chr6:167582786-167583034	FPKM1_group_28907_transcript_1
21	lnc-TCP10L2-1	chr6:167559902-167560143	NONHSAT116082
22	lnc-TCP10-2	chr6:167810373-167814438	ucscGeneNc_uc003qvx_1
23	lnc-TCP10-2	chr6:167822441-167822752	ucscGeneNc_uc003qvx_1
24	lnc-TTLL2-1	chr6:167804760-167804979	XLOC_005541
25	lnc-GPR31-1	chr6:167653688-167653968	XLOC_005921
26	lnc-GPR31-3	chr6:167583039-167583124	FPKM1_group_28907_transcript_1
27	lnc-TCP10-1	chr6:167787839-167789289	NONHSAT116097
28	lnc-GPR31-2	chr6:167571213-167571283	l_3324_chr6:167571212-167573961_ovary
29	lnc-TCP10-3	chr6:167838864-167838906	ucscGeneNc_uc003qvy_1
30	lnc-TCP10L2-1	chr6:167577889-167578048	NONHSAT116082
31	lnc-TCP10-2	chr6:167821589-167821728	ucscGeneNc_uc003qvx_1
32	lnc-GPR31-1	chr6:167651156-167651293	XLOC_005921
33	lnc-TCP10L2-1	chr6:167562878-167562972	NONHSAT116082
34	lnc-CCR6-1	chr6:167579265-167579394	NONHSAT116084
35	lnc-GPR31-1	chr6:167650996-167651293	XLOC_005921
36	lnc-CCR6-2	chr6:167591872-167592248	NONHSAT116087
37	lnc-GPR31-3	chr6:167583147-167583385	FPKM1_group_28907_transcript_1
38	lnc-UNC93A-1	chr6:167655379-167655453	XLOC_005540
39	lnc-TTLL2-2	chr6:167840757-167840858	NONHSAT116104
40	lnc-GPR31-1	chr6:167653636-167653833	XLOC_005921
41	lnc-UNC93A-3	chr6:167764293-167764966	NONHSAT116095
42	lnc-TCP10-3	chr6:167826637-167827774	ucscGeneNc_uc003qvy_1
43	lnc-UNC93A-2	chr6:167760960-167761541	NONHSAT116094

No data

Variant related genes	Relation type
UNC93A	TF binding region
TCP10	TF binding region
TTLL2	TF binding region
ENSG00000231720	TF binding region
GPR31	TF binding region
TCP10L2	TF binding region
ENSG00000228648	TF binding region
CCR6	TF binding region
ENSG00000216966	TF binding region
ENSG00000217447	TF binding region
UNC93A	CpG island
TCP10	CpG island
TTLL2	CpG island
ENSG00000231720	CpG island
GPR31	CpG island
TCP10L2	CpG island
ENSG00000228648	CpG island
CCR6	CpG island
ENSG00000216966	CpG island
ENSG00000217447	CpG island
ENSG00000101166	chromatin interactions
ENSG00000112494	chromatin interactions
ENSG00000265828	chromatin interactions
ENSG00000112486	chromatin interactions
ENSG00000166984	chromatin interactions
ENSG00000180198	chromatin interactions
ENSG00000120436	chromatin interactions
ENSG00000216966	chromatin interactions
CYBASC3	miRNA target sites
CYB5R4	miRNA target sites

Extended variants
information (count: 15149 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:15149 , 50 per page) page: 1 2 3 4 5 6 7 ... 303

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs189533372	chr6:167501258-167501259	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs143806876	chr6:167501330-167501331	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs532243235	chr6:167501346-167501347	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs547015342	chr6:167501354-167501355	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs148153037	chr6:167501386-167501387	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs11758004	chr6:167501422-167501423	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs142947548	chr6:167501437-167501438	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs59677510	chr6:167501448-167501449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs398003328	chr6:167501449-167501450	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs13205998	chr6:167501452-167501453	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs541189973	chr6:167501477-167501478	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs9459873	chr6:167501479-167501480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs554367286	chr6:167501483-167501484	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs569690127	chr6:167501490-167501491	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs537653722	chr6:167501491-167501492	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs13191593	chr6:167501493-167501494	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs76476597	chr6:167501529-167501530	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs181003453	chr6:167501577-167501578	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs113850022	chr6:167501581-167501582	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs561285297	chr6:167501668-167501669	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs370440372	chr6:167501707-167501708	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs531335101	chr6:167501722-167501723	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs374712991	chr6:167501723-167501724	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs553371977	chr6:167501733-167501734	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs6925969	chr6:167501738-167501739	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
26	rs62436798	chr6:167501741-167501742	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs542160136	chr6:167501763-167501764	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs563639604	chr6:167501788-167501789	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs73039146	chr6:167501922-167501923	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs201812669	chr6:167501927-167501928	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs61582484	chr6:167501934-167501935	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs113139951	chr6:167502087-167502088	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs201224534	chr6:167502212-167502213	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs532305466	chr6:167502250-167502251	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs533019963	chr6:167502293-167502294	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs547367859	chr6:167502299-167502300	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs6456155	chr6:167502355-167502356	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs533288266	chr6:167502446-167502447	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs201829347	chr6:167502447-167502448	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs548465144	chr6:167502471-167502472	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs529662830	chr6:167502514-167502515	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs183451580	chr6:167502571-167502572	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs372501974	chr6:167502582-167502583	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs563570109	chr6:167502606-167502607	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs1331301	chr6:167502638-167502639	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs370372180	chr6:167502680-167502681	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs559224860	chr6:167502698-167502699	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs59621282	chr6:167502758-167502759	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs187006763	chr6:167502801-167502802	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs535385594	chr6:167502848-167502849	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Colorectal cancer	16272173	CNVD
Ependymoma	16718352	CNVD
Gastric cancer	17908304	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Developmental delay	19490664	CNVD
Burkitt''s lymphoma	18698080	CNVD
Neurodevelopmental disorder	22521361	CNVD
small cell lung cancer	20016488	CNVD
Adenoid cystic carcinoma	18698036	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Leukemia	18688285	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Burkitt''s lymphoma	19759907	CNVD
Esophageal cancer	21851588	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Breast cancer	17133270	CNVD
Testicular germ cell tumor	18059402	CNVD
Chordoma	18071362	CNVD
Glioblastoma multiforme	19435819	CNVD
Developmental delay	21147756	CNVD
Ovarian cancer	21720365	CNVD
abnormal development	18461090	CNVD
Epilepsy	22083797	CNVD
Myelofibrosis	22110671	CNVD
chordoma	19801981	CNVD
Myxofibrosarcoma	16751306	CNVD
Autism	17483303	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Acute myeloid leukemia	19651601	CNVD
Sudden cardiac death	19188705	CNVD
Myofibroblastic sarcoma	19369631	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:3491 , 50 per page) page: 1 2 3 4 5 6 7 ... 70

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:167492000-167503400	Weak transcription	Right Atrium	heart
2	chr6:167501800-167502200	ZNF genes & repeats	GM12878-XiMat	blood
3	chr6:167502000-167506000	Enhancers	Primary B cells from peripheral blood	blood
4	chr6:167502200-167503800	Enhancers	GM12878-XiMat	blood
5	chr6:167502200-167504600	Enhancers	Primary B cells from cord blood	blood
6	chr6:167502800-167503200	Enhancers	Monocytes-CD14+_RO01746	blood
7	chr6:167502800-167503400	Enhancers	Primary neutrophils fromperipheralblood	blood
8	chr6:167502800-167503400	Enhancers	Primary hematopoietic stem cells short term culture	blood
9	chr6:167502800-167506200	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
10	chr6:167502800-167507400	Enhancers	Primary monocytes fromperipheralblood	blood
11	chr6:167503000-167503200	Enhancers	Duodenum Mucosa	Duodenum
12	chr6:167503000-167503200	Enhancers	Gastric	stomach
13	chr6:167503000-167503600	Enhancers	Fetal Muscle Trunk	muscle
14	chr6:167503000-167503600	Enhancers	Spleen	Spleen
15	chr6:167503000-167504200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr6:167503000-167504200	Enhancers	Adipose Nuclei	Adipose
17	chr6:167503000-167504400	Enhancers	Fetal Muscle Leg	muscle
18	chr6:167503000-167506200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
19	chr6:167503200-167504200	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
20	chr6:167503200-167504200	Enhancers	Placenta	Placenta
21	chr6:167503200-167505600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
22	chr6:167503200-167508000	Weak transcription	Gastric	stomach
23	chr6:167503200-167509800	Enhancers	Primary hematopoietic stem cells	blood
24	chr6:167503400-167503600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
25	chr6:167503400-167503600	Enhancers	Right Atrium	heart
26	chr6:167503400-167504400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
27	chr6:167503400-167506200	Enhancers	Thymus	Thymus
28	chr6:167503600-167503800	Enhancers	Primary hematopoietic stem cells short term culture	blood
29	chr6:167503600-167503800	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
30	chr6:167503600-167504000	Enhancers	Sigmoid Colon	Sigmoid Colon
31	chr6:167503600-167504600	Weak transcription	Spleen	Spleen
32	chr6:167503600-167505200	Weak transcription	Fetal Muscle Trunk	muscle
33	chr6:167503600-167506400	Enhancers	Primary T cells fromperipheralblood	blood
34	chr6:167503600-167506400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
35	chr6:167503600-167507200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
36	chr6:167503600-167507600	Weak transcription	Right Atrium	heart
37	chr6:167503600-167527200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
38	chr6:167503800-167504000	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
39	chr6:167503800-167504800	Flanking Active TSS	GM12878-XiMat	blood
40	chr6:167503800-167506000	Enhancers	Fetal Thymus	thymus
41	chr6:167503800-167506400	Enhancers	Primary T cells from cord blood	blood
42	chr6:167503800-167506600	Enhancers	Primary T helper cells fromperipheralblood	blood
43	chr6:167503800-167507400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
44	chr6:167504000-167504200	Enhancers	Rectal Mucosa Donor 31	rectum
45	chr6:167504000-167505200	Weak transcription	Sigmoid Colon	Sigmoid Colon
46	chr6:167504000-167506200	Enhancers	Primary hematopoietic stem cells short term culture	blood
47	chr6:167504200-167504400	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
48	chr6:167504200-167505000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
49	chr6:167504200-167505200	Weak transcription	Placenta	Placenta
50	chr6:167504200-167506600	Enhancers	Primary T helper cells PMA-I stimulated	--

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