Variant report

Variant	esv2758259
Chromosome Location	chr11:25633803-25842666
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:570)
CpG islands
(count:61)
Chromatin interactive
region (count:8)
LncRNA
region (count:24)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:570 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:25758683-25759020	HepG2	liver:	n/a	n/a
2	ATF1	chr11:25756688-25756790	K562	blood:	n/a	n/a
3	BACH1	chr11:25723954-25723977	H1-hESC	embryonic stem cell:	n/a	n/a
4	BRCA1	chr11:25766627-25766768	Hela-S3	cervix:	n/a	n/a
5	BRCA1	chr11:25748088-25748207	Hela-S3	cervix:	n/a	n/a
6	CEBPB	chr11:25756183-25756490	H1-hESC	embryonic stem cell:	n/a	n/a
7	CEBPB	chr11:25767482-25767804	ECC-1	luminal epithelium:	n/a	n/a
8	CEBPB	chr11:25767143-25767521	HepG2	liver:	n/a	n/a
9	CEBPB	chr11:25827237-25827541	HepG2	liver:	n/a	chr11:25827359-25827370
10	CEBPB	chr11:25654801-25655170	MCF-7	breast:	n/a	chr11:25654930-25654941
11	CEBPB	chr11:25818101-25818404	K562	blood:	n/a	chr11:25818266-25818275 chr11:25818266-25818277 chr11:25818264-25818275
12	CEBPB	chr11:25654759-25654990	H1-hESC	embryonic stem cell:	n/a	chr11:25654930-25654941
13	CEBPB	chr11:25767508-25767814	MCF-7	breast:	n/a	n/a
14	CEBPB	chr11:25732290-25733191	Hela-S3	cervix:	n/a	chr11:25732793-25732805
15	CEBPB	chr11:25654755-25655103	Hela-S3	cervix:	n/a	chr11:25654930-25654941
16	CEBPB	chr11:25760324-25760536	HepG2	liver:	n/a	chr11:25760460-25760471
17	CEBPB	chr11:25755348-25755781	Hela-S3	cervix:	n/a	chr11:25755487-25755500
18	CEBPB	chr11:25827197-25827530	IMR90	lung:	n/a	chr11:25827359-25827370
19	CEBPB	chr11:25818028-25818395	Hela-S3	cervix:	n/a	chr11:25818266-25818275 chr11:25818266-25818277 chr11:25818264-25818275
20	CEBPB	chr11:25654797-25655096	A549	lung:	n/a	chr11:25654930-25654941
21	CEBPB	chr11:25767438-25767649	H1-hESC	embryonic stem cell:	n/a	n/a
22	CEBPB	chr11:25654846-25655049	MCF-7	breast:	n/a	chr11:25654930-25654941
23	CEBPB	chr11:25760351-25760543	A549	lung:	n/a	chr11:25760460-25760471
24	CEBPB	chr11:25767068-25767839	Hela-S3	cervix:	n/a	n/a
25	CEBPB	chr11:25734574-25734774	HepG2	liver:	n/a	chr11:25734672-25734683
26	CEBPB	chr11:25798908-25799279	Hela-S3	cervix:	n/a	n/a
27	CEBPB	chr11:25817980-25818325	IMR90	lung:	n/a	chr11:25818266-25818275 chr11:25818266-25818277 chr11:25818264-25818275
28	CEBPB	chr11:25654764-25655080	HepG2	liver:	n/a	chr11:25654930-25654941
29	CEBPB	chr11:25818065-25818360	HepG2	liver:	n/a	chr11:25818266-25818275 chr11:25818266-25818277 chr11:25818264-25818275
30	CEBPB	chr11:25636635-25637011	Hela-S3	cervix:	n/a	n/a
31	CEBPB	chr11:25767185-25767645	A549	lung:	n/a	n/a
32	CEBPB	chr11:25767206-25767744	IMR90	lung:	n/a	n/a
33	CEBPB	chr11:25654767-25655104	IMR90	lung:	n/a	chr11:25654930-25654941
34	CEBPB	chr11:25760363-25760551	K562	blood:	n/a	chr11:25760460-25760471
35	CHD1	chr11:25756180-25756251	H1-hESC	embryonic stem cell:	n/a	n/a
36	CHD2	chr11:25802172-25802176	HepG2	liver:	n/a	n/a
37	CHD2	chr11:25790872-25791180	Hela-S3	cervix:	n/a	n/a
38	CTCF	chr11:25756180-25756330	HAc	cerebellar:	n/a	n/a
39	CTCF	chr11:25816480-25816630	MCF-7	breast:	n/a	n/a
40	CTCF	chr11:25756275-25756455	Pancreas_OC	pancreas:	n/a	chr11:25756332-25756353 chr11:25756338-25756354 chr11:25756337-25756355
41	CTCF	chr11:25755433-25755564	HUVEC	blood vessel:	n/a	chr11:25755493-25755514 chr11:25755498-25755516
42	CTCF	chr11:25756222-25756394	K562	blood:	n/a	chr11:25756332-25756353 chr11:25756338-25756354 chr11:25756337-25756355
43	CTCF	chr11:25756260-25756410	GM06990	blood:	n/a	chr11:25756332-25756353 chr11:25756338-25756354 chr11:25756337-25756355
44	CTCF	chr11:25822759-25822814	MCF-7	breast:	n/a	chr11:25822769-25822790
45	CTCF	chr11:25808430-25808472	GM13976	blood:	n/a	n/a
46	CTCF	chr11:25816468-25816614	MCF-7	breast:	n/a	n/a
47	CTCF	chr11:25756253-25756431	Medullo	brain:	n/a	chr11:25756332-25756353 chr11:25756338-25756354 chr11:25756337-25756355
48	CTCF	chr11:25756240-25756390	NHEK	skin:	n/a	chr11:25756332-25756353 chr11:25756338-25756354 chr11:25756337-25756355
49	CTCF	chr11:25755420-25755570	SK-N-SH_RA	brain:	n/a	chr11:25755493-25755514 chr11:25755498-25755516
50	CTCF	chr11:25755440-25755590	Hela-S3	cervix:	n/a	chr11:25755493-25755514 chr11:25755498-25755516

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:25794249-25794299	AG04449	skin:	fetal
2	chr11:25794249-25794299	Hela-S3	cervix:	n/a
3	chr11:25794249-25794299	AG04450	lung:	fetal
4	chr11:25794249-25794299	SK-N-SH	brain:	n/a
5	chr11:25794249-25794299	HNPCEpiC	eye:	n/a
6	chr11:25794249-25794299	Caco-2	colon:	n/a
7	chr11:25794249-25794299	HIPEpiC	eye:	n/a
8	chr11:25794249-25794299	H1-hESC	embryonic stem cell:	embryo
9	chr11:25794249-25794299	ProgFib	skin:	n/a
10	chr11:25794249-25794299	HepG2	liver:	n/a
11	chr11:25794249-25794299	NHDF-neo	bronchial:	n/a
12	chr11:25794249-25794299	T-47D	breast:	n/a
13	chr11:25794249-25794299	AG09309	skin:	n/a
14	chr11:25794249-25794299	HRCEpiC	kidney:	n/a
15	chr11:25794249-25794299	IMR90	lung:	fetal
16	chr11:25794249-25794299	HRPEpiC	eye:	n/a
17	chr11:25794249-25794299	HCT-116	colon:	n/a
18	chr11:25794249-25794299	ovcar-3	ovarian:	n/a
19	chr11:25794249-25794299	SK-N-SH_RA	brain:	n/a
20	chr11:25794249-25794299	LNCaP	prostate:	n/a
21	chr11:25794249-25794299	HCPEpiC	choroid plexus:	n/a
22	chr11:25794249-25794299	BE2_C	brain:	n/a
23	chr11:25794249-25794299	PANC-1	pancreas:	n/a
24	chr11:25794249-25794299	A549	lung:	n/a
25	chr11:25794249-25794299	BJ	skin:	n/a
26	chr11:25794249-25794299	HEEpiC	esophagus:	n/a
27	chr11:25794249-25794299	HRE	kidney:	n/a
28	chr11:25794249-25794299	RPTEC	kidney:	n/a
29	chr11:25794249-25794299	AoSMC	blood vessel:	n/a
30	chr11:25794249-25794299	SK-N-MC	brain:	n/a
31	chr11:25794249-25794299	PrEC	prostate:	n/a
32	chr11:25794249-25794299	HAEpiC	amniotic membrane:	n/a
33	chr11:25794249-25794299	NT2-D1	testis:	n/a
34	chr11:25794249-25794299	SKMC	muscle:	n/a
35	chr11:25794249-25794299	Jurkat	blood:	n/a
36	chr11:25794249-25794299	HL-60	blood:	n/a
37	chr11:25794249-25794299	PFSK-1	brain:	n/a
38	chr11:25794249-25794299	GM06990	blood:	n/a
39	chr11:25794249-25794299	GM12892	blood:	n/a
40	chr11:25794249-25794299	GM12878	blood:	n/a
41	chr11:25794249-25794299	MCF-7	breast:	n/a
42	chr11:25794249-25794299	AG10803	skin:	n/a
43	chr11:25794249-25794299	CMK	blood:	n/a
44	chr11:25794249-25794299	GM12891	blood:	n/a
45	chr11:25794249-25794299	HCM	heart:	n/a
46	chr11:25794249-25794299	K562	blood:	n/a
47	chr11:25794249-25794299	NH-A	brain:	n/a
48	chr11:25794249-25794299	GM19239	blood:	n/a
49	chr11:25794249-25794299	HCF	heart:	n/a
50	chr11:25794249-25794299	ECC-1	luminal epithelium:	n/a

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:24802835..24803539-chr11:25755478..25755981,2	MCF-7	breast:
2	chr11:25813617..25816295-chr11:25817467..25820329,2	K562	blood:
3	chr11:24801274..24801786-chr11:25755056..25755745,2	MCF-7	breast:
4	chr11:25709860..25710784-chr18:64774033..64774666,2	MCF-7	breast:
5	chr11:25813617..25816295-chr11:25817467..25820329,2	K562	blood:
6	chr11:25689568..25691114-chr11:25691280..25694068,2	K562	blood:
7	chr11:25689568..25691114-chr11:25691280..25694068,2	K562	blood:
8	chr11:25619794..25621822-chr11:25698109..25699950,2	K562	blood:

(count:24 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ANO3-3	chr11:25756317-25756416	NONHSAT018451
2	lnc-ANO3-3	chr11:25795717-25795970	ENSG00000254456
3	lnc-ANO3-3	chr11:25799241-25799338	NONHSAT018451
4	lnc-ANO3-3	chr11:25802028-25802169	NONHSAT018451
5	lnc-ANO3-3	chr11:25762023-25762107	NONHSAT018451
6	lnc-ANO3-3	chr11:25788759-25788835	NONHSAT018451
7	lnc-ANO3-3	chr11:25799241-25799338	ENSG00000254456
8	lnc-ANO3-3	chr11:25788759-25788835	ENSG00000254456
9	lnc-ANO3-3	chr11:25792018-25792115	ENSG00000254456
10	lnc-ANO3-3	chr11:25803176-25803213	ENSG00000254456
11	lnc-ANO3-3	chr11:25756317-25756416	ENSG00000254456
12	lnc-ANO3-3	chr11:25756317-25756416	ENSG00000254456
13	lnc-ANO3-3	chr11:25792018-25792115	ENSG00000254456
14	lnc-ANO3-3	chr11:25799241-25799338	ENSG00000254456
15	lnc-ANO3-3	chr11:25756356-25756416	ENSG00000254456
16	lnc-ANO3-3	chr11:25762023-25762107	ENSG00000254456
17	lnc-ANO3-3	chr11:25762023-25762107	ENSG00000254456
18	lnc-ANO3-3	chr11:25802028-25802169	ENSG00000254456
19	lnc-ANO3-3	chr11:25792018-25792115	NONHSAT018451
20	lnc-ANO3-3	chr11:25803176-25803305	ENSG00000254456
21	lnc-ANO3-3	chr11:25803176-25803213	NONHSAT018451
22	lnc-ANO3-3	chr11:25802028-25802169	ENSG00000254456
23	lnc-ANO3-3	chr11:25795717-25795970	NONHSAT018451
24	lnc-LUZP2-2	chr11:25652266-25652587	NONHSAT018449

No data

Variant related genes	Relation type
ENSG00000255454	TF binding region
ENSG00000254456	TF binding region
ENSG00000255454	CpG island
ENSG00000254456	CpG island

Extended variants
information (count: 3279 )
Associated
traits (count: 58 )

Variant overlapped rSNPs/rCNVs (count:3279 , 50 per page) page: 1 2 3 4 5 6 7 ... 66

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs540102093	chr11:25633826-25633827	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs561922551	chr11:25633832-25633833	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs529218643	chr11:25633849-25633850	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs1080714	chr11:25633873-25633874	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs34163590	chr11:25633884-25633885	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs565805491	chr11:25633917-25633918	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs191344726	chr11:25633973-25633974	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs34389620	chr11:25633980-25633981	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs569252578	chr11:25634004-25634005	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs533202922	chr11:25634032-25634033	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs72872955	chr11:25634061-25634062	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs566897170	chr11:25634081-25634082	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs534357783	chr11:25634111-25634112	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs3891779	chr11:25634124-25634125	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs555553287	chr11:25634130-25634131	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs140116617	chr11:25634155-25634156	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs538171517	chr11:25634165-25634166	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs116773764	chr11:25634168-25634169	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs574878573	chr11:25634171-25634172	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs545522543	chr11:25634206-25634207	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs368201881	chr11:25634210-25634211	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs572859979	chr11:25634223-25634224	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs114698656	chr11:25634238-25634239	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs576031222	chr11:25634239-25634240	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs561885821	chr11:25634275-25634276	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs543026878	chr11:25634302-25634303	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs115199668	chr11:25634305-25634306	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs35483846	chr11:25634351-25634352	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs544499583	chr11:25634362-25634363	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs11028794	chr11:25634366-25634367	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs533355852	chr11:25634370-25634371	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs142262041	chr11:25634372-25634373	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs115534934	chr11:25634412-25634413	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs371885981	chr11:25634422-25634423	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs182664073	chr11:25634448-25634449	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs1443163	chr11:25634499-25634500	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs567502107	chr11:25634532-25634533	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs559473790	chr11:25634535-25634536	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs540439045	chr11:25634542-25634543	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs185188713	chr11:25634548-25634549	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs191081787	chr11:25634573-25634574	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs533261076	chr11:25634585-25634586	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs550053431	chr11:25634586-25634587	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs146389312	chr11:25634590-25634591	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs183220279	chr11:25634596-25634597	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs557482556	chr11:25634608-25634609	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs563626699	chr11:25634614-25634615	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs1373025	chr11:25634615-25634616	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs139546198	chr11:25634641-25634642	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs573870016	chr11:25634655-25634656	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:58)

Disease	PMID	Source
Burkitt''s lymphoma	19759907	CNVD
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Multiple myeloma	16461302	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Renal cell carcinoma	18194544	CNVD
Myelofibrosis	22110671	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Autism	22102821	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Bipolar disorder	19114987	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:95 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:25632400-25637400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr11:25633400-25637000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr11:25633600-25635200	Enhancers	Breast Myoepithelial Primary Cells	Breast
4	chr11:25634200-25634800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr11:25634200-25634800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
6	chr11:25634200-25634800	Enhancers	Fetal Muscle Leg	muscle
7	chr11:25634200-25635600	Enhancers	Fetal Lung	lung
8	chr11:25634800-25636600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
9	chr11:25635200-25640200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr11:25635600-25636600	Weak transcription	Fetal Lung	lung
11	chr11:25636400-25637800	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr11:25636600-25636800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
13	chr11:25636600-25636800	Enhancers	Fetal Lung	lung
14	chr11:25636800-25637200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
15	chr11:25637000-25637200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
16	chr11:25637200-25637600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
17	chr11:25637200-25637800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr11:25637200-25637800	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr11:25637200-25637800	Enhancers	HUES64 Cell Line	embryonic stem cell
20	chr11:25637400-25637600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr11:25637600-25638000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
22	chr11:25640200-25640400	Enhancers	Breast Myoepithelial Primary Cells	Breast
23	chr11:25640400-25641400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
24	chr11:25641400-25641600	Enhancers	Breast Myoepithelial Primary Cells	Breast
25	chr11:25649400-25649800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr11:25670800-25671400	Active TSS	HUES6 Cell Line	embryonic stem cell
27	chr11:25671000-25671400	Active TSS	ES-I3 Cell Line	embryonic stem cell
28	chr11:25671200-25672000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr11:25675000-25677800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
30	chr11:25677400-25678000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
31	chr11:25677800-25678000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
32	chr11:25678000-25685800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr11:25680400-25681200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
34	chr11:25680600-25681000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
35	chr11:25681400-25681800	Enhancers	Pancreatic Islets	Pancreatic Islet
36	chr11:25685800-25686000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
37	chr11:25686000-25691600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
38	chr11:25688000-25688600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr11:25688600-25689800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr11:25689800-25690000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
41	chr11:25690000-25691200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr11:25690200-25690600	Enhancers	Ovary	ovary
43	chr11:25691600-25691800	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
44	chr11:25697400-25698000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr11:25698000-25698800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr11:25698800-25702200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr11:25702200-25703600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr11:25702800-25703600	Enhancers	HUES6 Cell Line	embryonic stem cell
49	chr11:25703000-25703400	Enhancers	HUES48 Cell Line	embryonic stem cell
50	chr11:25703600-25716200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links