Variant report

Variant	esv2758268
Chromosome Location	chr11:48856977-49185190
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2581)
CpG islands
(count:2624)
Chromatin interactive
region (count:4)
LncRNA
region (count:14)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2581 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:48895975-48896341	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:48892892-48893269	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:48880376-48880748	HepG2	liver:	n/a	n/a
4	ATF1	chr11:48892890-48893270	K562	blood:	n/a	n/a
5	ATF1	chr11:48867583-48867993	K562	blood:	n/a	n/a
6	ATF1	chr11:48896850-48897050	K562	blood:	n/a	n/a
7	ATF1	chr11:48883351-48883720	K562	blood:	n/a	n/a
8	ATF1	chr11:48940082-48940286	K562	blood:	n/a	n/a
9	ATF1	chr11:48859189-48859770	K562	blood:	n/a	n/a
10	ATF1	chr11:48895825-48896343	K562	blood:	n/a	n/a
11	ATF1	chr11:48880374-48880748	K562	blood:	n/a	n/a
12	ATF3	chr11:48892858-48893151	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr11:48881669-48882080	K562	blood:	n/a	n/a
14	BACH1	chr11:48956270-48956471	K562	blood:	n/a	n/a
15	BACH1	chr11:48961635-48962346	K562	blood:	n/a	n/a
16	BATF	chr11:48861796-48862105	GM12878	blood:	n/a	n/a
17	BATF	chr11:48898982-48899252	GM12878	blood:	n/a	n/a
18	BATF	chr11:48934446-48934684	GM12878	blood:	n/a	n/a
19	BATF	chr11:48894524-48895290	GM12878	blood:	n/a	n/a
20	BATF	chr11:48883215-48883597	GM12878	blood:	n/a	n/a
21	BATF	chr11:48898958-48899437	GM12878	blood:	n/a	n/a
22	BATF	chr11:48867677-48867900	GM12878	blood:	n/a	n/a
23	BATF	chr11:48976038-48976262	GM12878	blood:	n/a	n/a
24	BATF	chr11:48934181-48934321	GM12878	blood:	n/a	n/a
25	BATF	chr11:48976068-48976336	GM12878	blood:	n/a	n/a
26	BATF	chr11:48946385-48946719	GM12878	blood:	n/a	n/a
27	BATF	chr11:48895948-48896327	GM12878	blood:	n/a	n/a
28	BATF	chr11:48887996-48888565	GM12878	blood:	n/a	n/a
29	BATF	chr11:48985116-48985352	GM12878	blood:	n/a	n/a
30	BATF	chr11:48953227-48953611	GM12878	blood:	n/a	n/a
31	BATF	chr11:48866749-48866988	GM12878	blood:	n/a	n/a
32	BATF	chr11:48883213-48883919	GM12878	blood:	n/a	n/a
33	BATF	chr11:48885554-48885939	GM12878	blood:	n/a	n/a
34	BATF	chr11:48955305-48955628	GM12878	blood:	n/a	n/a
35	BATF	chr11:48895950-48896265	GM12878	blood:	n/a	n/a
36	BATF	chr11:48946780-48947152	GM12878	blood:	n/a	n/a
37	BATF	chr11:48916722-48917006	GM12878	blood:	n/a	chr11:48916904-48916914
38	BATF	chr11:48931968-48932274	GM12878	blood:	n/a	n/a
39	BATF	chr11:48985042-48985405	GM12878	blood:	n/a	n/a
40	BATF	chr11:48943793-48944288	GM12878	blood:	n/a	n/a
41	BATF	chr11:48945011-48945390	GM12878	blood:	n/a	n/a
42	BATF	chr11:48861740-48862096	GM12878	blood:	n/a	n/a
43	BATF	chr11:48945095-48945310	GM12878	blood:	n/a	n/a
44	BATF	chr11:48877878-48878291	GM12878	blood:	n/a	n/a
45	BATF	chr11:48940420-48940720	GM12878	blood:	n/a	n/a
46	BATF	chr11:48934428-48934662	GM12878	blood:	n/a	n/a
47	BATF	chr11:48856704-48856991	GM12878	blood:	n/a	n/a
48	BATF	chr11:48877883-48878085	GM12878	blood:	n/a	n/a
49	BATF	chr11:48953209-48953631	GM12878	blood:	n/a	n/a
50	BATF	chr11:48859171-48859730	GM12878	blood:	n/a	n/a

(count:2624 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:49003527-49003577	AG09319	gingival:	n/a
2	chr11:49003527-49003577	AG09319	gingival:	n/a
3	chr11:49003527-49003577	HAEpiC	amniotic membrane:	n/a
4	chr11:48922674-48922724	CMK	blood:	n/a
5	chr11:49070231-49070281	AG04449	skin:	fetal
6	chr11:48923668-48923718	HCPEpiC	choroid plexus:	n/a
7	chr11:49124111-49124161	AG09319	gingival:	n/a
8	chr11:48923668-48923718	CMK	blood:	n/a
9	chr11:48987265-48987315	Hela-S3	cervix:	n/a
10	chr11:48922035-48922085	HAEpiC	amniotic membrane:	n/a
11	chr11:49068653-49068703	HCPEpiC	choroid plexus:	n/a
12	chr11:48922741-48922791	HCPEpiC	choroid plexus:	n/a
13	chr11:48924804-48924854	HAEpiC	amniotic membrane:	n/a
14	chr11:49123325-49123375	HepG2	liver:	n/a
15	chr11:48977834-48977884	MCF10A-Er-Src	breast:	n/a
16	chr11:48880009-48880059	T-47D	breast:	n/a
17	chr11:49128127-49128177	SK-N-SH	brain:	n/a
18	chr11:48977527-48977577	HCT-116	colon:	n/a
19	chr11:49124111-49124161	AG09309	skin:	n/a
20	chr11:48880009-48880059	AG04450	lung:	fetal
21	chr11:48990330-48990380	HRE	kidney:	n/a
22	chr11:48977834-48977884	ProgFib	skin:	n/a
23	chr11:49071438-49071488	Hepatocyte	liver:	n/a
24	chr11:48924804-48924854	Caco-2	colon:	n/a
25	chr11:49071763-49071813	HCF	heart:	n/a
26	chr11:49081540-49081590	H1-hESC	embryonic stem cell:	embryo
27	chr11:49016314-49016364	HCF	heart:	n/a
28	chr11:48922035-48922085	Hepatocyte	liver:	n/a
29	chr11:49081540-49081590	Caco-2	colon:	n/a
30	chr11:48880009-48880059	NT2-D1	testis:	n/a
31	chr11:49072348-49072398	HNPCEpiC	eye:	n/a
32	chr11:48987265-48987315	HRCEpiC	kidney:	n/a
33	chr11:49071763-49071813	PANC-1	pancreas:	n/a
34	chr11:49073835-49073885	Hepatocyte	liver:	n/a
35	chr11:48923392-48923442	HMEC	breast:	n/a
36	chr11:48901705-48901755	NH-A	brain:	n/a
37	chr11:48922035-48922085	HCM	heart:	n/a
38	chr11:48987265-48987315	HIPEpiC	eye:	n/a
39	chr11:49016314-49016364	U87	brain:	n/a
40	chr11:49003361-49003411	Hela-S3	cervix:	n/a
41	chr11:48977527-48977577	MCF-7	breast:	n/a
42	chr11:48987265-48987315	CMK	blood:	n/a
43	chr11:49124111-49124161	GM12878	blood:	n/a
44	chr11:49123325-49123375	HCM	heart:	n/a
45	chr11:48990330-48990380	HPAEpiC	pulmonary alveolar:	n/a
46	chr11:48922674-48922724	NB4	blood:	n/a
47	chr11:48902014-48902064	NHBE	bronchial:	n/a
48	chr11:48923668-48923718	RPTEC	kidney:	n/a
49	chr11:48880009-48880059	AG04449	skin:	fetal
50	chr11:48990330-48990380	AG04450	lung:	fetal

(count:4 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:121484902..121485419-chr11:48946286..48946806,2	MCF-7	breast:
2	chr1:121484496..121485051-chr11:48865024..48865528,2	K562	blood:
3	chr11:48862246..48863766-chr12:38036979..38038502,2	MCF-7	breast:
4	chr1:121484040..121484766-chr11:48865024..48865526,2	MCF-7	breast:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC084851.1-5	chr11:48914808-48914900	NONHSAT021301
2	lnc-AC084851.1-5	chr11:48916513-48916636	NONHSAT021301
3	lnc-AC084851.1-4	chr11:48929840-48930498	NONHSAT021302
4	lnc-AC084851.1-4	chr11:48928655-48928750	NONHSAT021302
5	lnc-AC084851.1-2	chr11:48983254-48983362	NONHSAT021303
6	lnc-AC084851.1-2	chr11:48982485-48982577	NONHSAT021303
7	lnc-FOLH1-1	chr11:49155205-49156352	NONHSAT021310
8	lnc-AC084851.1-1	chr11:49113956-49114319	NONHSAT021308
9	lnc-AC084851.1-2	chr11:48981775-48981855	NONHSAT021303
10	lnc-AC084851.1-3	chr11:49132308-49132772	NONHSAT021309
11	lnc-AC084851.1-5	chr11:48919940-48920255	NONHSAT021301
12	lnc-AC084851.1-5	chr11:48919540-48919822	NONHSAT021301
13	lnc-AC084851.1-2	chr11:48981480-48981636	NONHSAT021303
14	lnc-TRIM64C-1	chr11:49092304-49092552	NONHSAT021307

No data

Variant related genes	Relation type
UBTFL7	TF binding region
ENSG00000205044	TF binding region
TRIM49B	TF binding region
ENSG00000255551	TF binding region
TRIM53CP	TF binding region
ENSG00000254920	TF binding region
ENSG00000254801	TF binding region
ENSG00000254567	TF binding region
FOLH1	TF binding region
ENSG00000254517	TF binding region
ENSG00000255527	TF binding region
TRIM51CP	TF binding region
TRIM51GP	TF binding region
TRIM64C	TF binding region
ENSG00000254412	TF binding region
ENSG00000254993	TF binding region
ENSG00000255452	TF binding region
ENSG00000254728	TF binding region
ENSG00000255338	TF binding region
UBTFL7	CpG island
ENSG00000205044	CpG island
TRIM49B	CpG island
ENSG00000255551	CpG island
TRIM53CP	CpG island
ENSG00000254920	CpG island
ENSG00000254801	CpG island
ENSG00000254567	CpG island
FOLH1	CpG island
ENSG00000254517	CpG island
ENSG00000255527	CpG island
TRIM51CP	CpG island
TRIM51GP	CpG island
TRIM64C	CpG island
ENSG00000254412	CpG island
ENSG00000254993	CpG island
ENSG00000255452	CpG island
ENSG00000254728	CpG island
ENSG00000255338	CpG island

Extended variants
information (count: 10704 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:10704 , 50 per page) page: 1 2 3 4 5 6 7 ... 215

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10769485	chr11:48856977-48856978	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs186572487	chr11:48856986-48856987	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs201700226	chr11:48857030-48857031	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs191373683	chr11:48857052-48857053	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs532534681	chr11:48857057-48857058	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs200020095	chr11:48857062-48857063	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs552621745	chr11:48857063-48857064	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs569397586	chr11:48857070-48857071	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs538425235	chr11:48857076-48857077	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs548910793	chr11:48857106-48857107	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs558883290	chr11:48857136-48857137	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs8188880	chr11:48857154-48857155	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs553766766	chr11:48857172-48857173	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs143257261	chr11:48857176-48857177	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs112312300	chr11:48857181-48857182	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs201803009	chr11:48857184-48857185	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs576756708	chr11:48857186-48857187	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs202045988	chr11:48857198-48857199	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs539187032	chr11:48857201-48857202	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs139707038	chr11:48857203-48857204	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs144123804	chr11:48857210-48857211	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs151164350	chr11:48857215-48857216	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs138283326	chr11:48857224-48857225	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs139470241	chr11:48857226-48857227	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs111713739	chr11:48857228-48857229	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs1662490	chr11:48857229-48857230	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs111936035	chr11:48857234-48857235	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs576195719	chr11:48857240-48857241	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs187715036	chr11:48857258-48857259	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs376962103	chr11:48857277-48857278	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs201848872	chr11:48857282-48857283	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs373741222	chr11:48857283-48857284	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs541582281	chr11:48857287-48857288	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs112680662	chr11:48857294-48857295	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs61898506	chr11:48857299-48857300	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs201946116	chr11:48857302-48857303	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs561650053	chr11:48857305-48857306	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs111628627	chr11:48857307-48857308	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs200377716	chr11:48857315-48857316	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs189758085	chr11:48857327-48857328	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs571977943	chr11:48857341-48857342	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs540913767	chr11:48857342-48857343	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs201448332	chr11:48857347-48857348	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs560315729	chr11:48857354-48857355	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs532537940	chr11:48857355-48857356	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs552430958	chr11:48857365-48857366	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs183465210	chr11:48857366-48857367	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs562961085	chr11:48857368-48857369	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs531946253	chr11:48857375-48857376	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs202181199	chr11:48857377-48857378	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Wilms tumour	21544195	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Renal cell carcinoma	18194544	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Hirschsprung''s Disease	21712996	CNVD
Follicular lymphoma	20505157	CNVD
Colorectal cancer	21128281	CNVD
Glioblastoma multiforme	21138945	CNVD
Breast cancer	21364760	CNVD
Prostate cancer	18632612	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22581003	CNVD
Breast cancer	21990379	CNVD
Acute myeloid leukemia	20729466	CNVD
Schizophrenia	20967226	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
early-passage human iPS cells	21368824	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Medulloblastoma	21163964	CNVD
small cell lung cancer	17426248	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:573 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:48851000-48868000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
2	chr11:48852400-48859400	Weak transcription	NHLF	lung
3	chr11:48853000-48862600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
4	chr11:48853000-48868800	ZNF genes & repeats	HUES48 Cell Line	embryonic stem cell
5	chr11:48853200-48868800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr11:48853400-48862800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
7	chr11:48853600-48868200	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
8	chr11:48855200-48857400	Weak transcription	K562	blood
9	chr11:48856400-48859200	Weak transcription	Colon Smooth Muscle	Colon
10	chr11:48856400-48859200	Weak transcription	Gastric	stomach
11	chr11:48856800-48857000	ZNF genes & repeats	NH-A	brain
12	chr11:48856800-48857800	ZNF genes & repeats	HUVEC	blood vessel
13	chr11:48857000-48859200	Weak transcription	NH-A	brain
14	chr11:48857400-48859800	ZNF genes & repeats	Adipose Nuclei	Adipose
15	chr11:48857600-48857800	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
16	chr11:48858800-48861400	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
17	chr11:48859000-48859200	Enhancers	HSMMtube	muscle
18	chr11:48859000-48859600	ZNF genes & repeats	HepG2	liver
19	chr11:48859000-48861000	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
20	chr11:48859200-48859400	Flanking Bivalent TSS/Enh	Primary T helper naive cells fromperipheralblood	blood
21	chr11:48859200-48859400	Bivalent Enhancer	Aorta	Aorta
22	chr11:48859200-48859400	Bivalent/Poised TSS	Psoas Muscle	Psoas
23	chr11:48859200-48859400	Flanking Active TSS	HSMMtube	muscle
24	chr11:48859200-48859600	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr11:48859200-48859600	ZNF genes & repeats	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr11:48859200-48859600	ZNF genes & repeats	HSMM	muscle
27	chr11:48859200-48859600	ZNF genes & repeats	K562	blood
28	chr11:48859200-48859600	ZNF genes & repeats	NHEK	skin
29	chr11:48859200-48859800	ZNF genes & repeats	ES-I3 Cell Line	embryonic stem cell
30	chr11:48859200-48859800	ZNF genes & repeats	ES-WA7 Cell Line	embryonic stem cell
31	chr11:48859200-48859800	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
32	chr11:48859200-48859800	Bivalent/Poised TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr11:48859200-48859800	ZNF genes & repeats	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr11:48859200-48859800	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
35	chr11:48859200-48859800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
36	chr11:48859200-48859800	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
37	chr11:48859200-48859800	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr11:48859200-48859800	ZNF genes & repeats	Primary T helper naive cells from peripheral blood	blood
39	chr11:48859200-48859800	ZNF genes & repeats	Primary T helper memory cells from peripheral blood 1	blood
40	chr11:48859200-48859800	ZNF genes & repeats	Primary T helper 17 cells PMA-I stimulated	--
41	chr11:48859200-48859800	ZNF genes & repeats	Primary T helper cells fromperipheralblood	blood
42	chr11:48859200-48859800	ZNF genes & repeats	Primary T regulatory cells fromperipheralblood	blood
43	chr11:48859200-48859800	Flanking Bivalent TSS/Enh	Primary T cells effector/memory enriched fromperipheralblood	blood
44	chr11:48859200-48859800	ZNF genes & repeats	Primary T killer memory cells from peripheral blood	blood
45	chr11:48859200-48859800	ZNF genes & repeats	Liver	Liver
46	chr11:48859200-48859800	ZNF genes & repeats	Brain Inferior Temporal Lobe	brain
47	chr11:48859200-48859800	ZNF genes & repeats	Brain Dorsolateral Prefrontal Cortex	brain
48	chr11:48859200-48859800	ZNF genes & repeats	Colonic Mucosa	Colon
49	chr11:48859200-48859800	ZNF genes & repeats	Colon Smooth Muscle	Colon
50	chr11:48859200-48859800	ZNF genes & repeats	Duodenum Mucosa	Duodenum

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links