Variant report

Variant	esv2758773
Chromosome Location	chr19:56235537-56326306
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:514)
CpG islands
(count:671)
Chromatin interactive
region (count:22)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:514 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF3	chr19:56320795-56321061	K562	blood:	n/a	n/a
2	ATF3	chr19:56320785-56321060	GM12878	blood:	n/a	n/a
3	BHLHE40	chr19:56320723-56321185	K562	blood:	n/a	n/a
4	BHLHE40	chr19:56320784-56321089	HepG2	liver:	n/a	n/a
5	CBX3	chr19:56320575-56321158	K562	blood:	n/a	n/a
6	CBX3	chr19:56320742-56321100	K562	blood:	n/a	n/a
7	CEBPB	chr19:56303142-56303233	A549	lung:	n/a	chr19:56303175-56303186 chr19:56303172-56303189
8	CEBPB	chr19:56268023-56268280	A549	lung:	n/a	chr19:56268130-56268143
9	CEBPB	chr19:56267971-56268186	K562	blood:	n/a	chr19:56268130-56268143
10	CEBPB	chr19:56258745-56258858	HepG2	liver:	n/a	chr19:56258809-56258820
11	CEBPB	chr19:56252893-56252942	HepG2	liver:	n/a	chr19:56252917-56252928
12	CEBPB	chr19:56320804-56321149	Hela-S3	cervix:	n/a	n/a
13	CEBPB	chr19:56306160-56306187	Hela-S3	cervix:	n/a	chr19:56306161-56306174 chr19:56306161-56306172
14	CEBPB	chr19:56268125-56268161	Hela-S3	cervix:	n/a	chr19:56268130-56268143
15	CEBPB	chr19:56303101-56303314	HepG2	liver:	n/a	chr19:56303175-56303186 chr19:56303172-56303189
16	CEBPB	chr19:56252761-56252952	K562	blood:	n/a	chr19:56252917-56252928
17	CEBPB	chr19:56303064-56303264	K562	blood:	n/a	chr19:56303175-56303186 chr19:56303172-56303189
18	CEBPB	chr19:56252920-56252934	A549	lung:	n/a	n/a
19	CEBPB	chr19:56309941-56309963	HepG2	liver:	n/a	chr19:56309945-56309956
20	CEBPB	chr19:56277973-56278182	K562	blood:	n/a	chr19:56278128-56278141
21	CEBPB	chr19:56306047-56306327	HepG2	liver:	n/a	chr19:56306161-56306174 chr19:56306161-56306172
22	CEBPB	chr19:56313719-56313987	Hela-S3	cervix:	n/a	n/a
23	CREB1	chr19:56320773-56321071	A549	lung:	n/a	n/a
24	CTCF	chr19:56320965-56321060	GM13976	blood:	n/a	n/a
25	CTCF	chr19:56289000-56289247	Gliobla	brain:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
26	CTCF	chr19:56320940-56321090	RPTEC	kidney:	n/a	n/a
27	CTCF	chr19:56289019-56289217	A549	lung:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
28	CTCF	chr19:56320712-56321273	MCF-7	breast:	n/a	n/a
29	CTCF	chr19:56320920-56321070	GM12866	blood:	n/a	n/a
30	CTCF	chr19:56289060-56289210	AG09309	skin:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
31	CTCF	chr19:56289020-56289170	GM12875	blood:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
32	CTCF	chr19:56289060-56289210	WERI-Rb-1	eye:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
33	CTCF	chr19:56288980-56289130	Hela-S3	cervix:	n/a	n/a
34	CTCF	chr19:56289040-56289190	HEK293	kidney:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
35	CTCF	chr19:56320980-56321130	MCF-7	breast:	n/a	n/a
36	CTCF	chr19:56320830-56321202	GM12878	blood:	n/a	n/a
37	CTCF	chr19:56320980-56321130	GM12870	blood:	n/a	n/a
38	CTCF	chr19:56312479-56312525	GM10248	blood:	n/a	n/a
39	CTCF	chr19:56288970-56289288	GM12878	blood:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
40	CTCF	chr19:56289040-56289190	MCF-7	breast:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
41	CTCF	chr19:56320753-56321242	K562	blood:	n/a	n/a
42	CTCF	chr19:56288920-56289070	GM12865	blood:	n/a	n/a
43	CTCF	chr19:56320880-56321030	GM12872	blood:	n/a	n/a
44	CTCF	chr19:56289200-56289350	Caco-2	colon:	n/a	n/a
45	CTCF	chr19:56320960-56321110	GM12873	blood:	n/a	n/a
46	CTCF	chr19:56321020-56321170	AG10803	skin:	n/a	n/a
47	CTCF	chr19:56320940-56321090	HL-60	blood:	n/a	n/a
48	CTCF	chr19:56289060-56289210	K562	blood:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
49	CTCF	chr19:56289100-56289250	BE2_C	brain:	n/a	chr19:56289124-56289137 chr19:56289121-56289139
50	CTCF	chr19:56322680-56322830	HCT-116	colon:	n/a	n/a

(count:671 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:56249743-56249793	RPTEC	kidney:	n/a
2	chr19:56270498-56270548	NHDF-neo	bronchial:	n/a
3	chr19:56321115-56321165	HCT-116	colon:	n/a
4	chr19:56250652-56250702	CMK	blood:	n/a
5	chr19:56250127-56250177	HRCEpiC	kidney:	n/a
6	chr19:56249291-56249341	AG09309	skin:	n/a
7	chr19:56321115-56321165	HCF	heart:	n/a
8	chr19:56269259-56269309	ProgFib	skin:	n/a
9	chr19:56274428-56274478	H1-hESC	embryonic stem cell:	embryo
10	chr19:56250127-56250177	K562	blood:	n/a
11	chr19:56274428-56274478	HCT-116	colon:	n/a
12	chr19:56269259-56269309	GM19239	blood:	n/a
13	chr19:56321115-56321165	HRE	kidney:	n/a
14	chr19:56249291-56249341	HRE	kidney:	n/a
15	chr19:56249291-56249341	GM12891	blood:	n/a
16	chr19:56250652-56250702	HUVEC	blood vessel:	n/a
17	chr19:56250127-56250177	MCF10A-Er-Src	breast:	n/a
18	chr19:56321115-56321165	T-47D	breast:	n/a
19	chr19:56249891-56249941	BE2_C	brain:	n/a
20	chr19:56250652-56250702	HCF	heart:	n/a
21	chr19:56250127-56250177	HEK293	kidney:	embryo
22	chr19:56249891-56249941	PFSK-1	brain:	n/a
23	chr19:56270729-56270779	IMR90	lung:	fetal
24	chr19:56270729-56270779	GM06990	blood:	n/a
25	chr19:56249291-56249341	A549	lung:	n/a
26	chr19:56250127-56250177	HepG2	liver:	n/a
27	chr19:56270498-56270548	CMK	blood:	n/a
28	chr19:56274428-56274478	GM12878	blood:	n/a
29	chr19:56269259-56269309	AoSMC	blood vessel:	n/a
30	chr19:56250127-56250177	SK-N-MC	brain:	n/a
31	chr19:56321115-56321165	GM19239	blood:	n/a
32	chr19:56274428-56274478	HL-60	blood:	n/a
33	chr19:56269246-56269296	ProgFib	skin:	n/a
34	chr19:56249743-56249793	AG10803	skin:	n/a
35	chr19:56270498-56270548	GM12878	blood:	n/a
36	chr19:56249891-56249941	U87	brain:	n/a
37	chr19:56269259-56269309	ECC-1	luminal epithelium:	n/a
38	chr19:56270729-56270779	PrEC	prostate:	n/a
39	chr19:56321115-56321165	NHDF-neo	bronchial:	n/a
40	chr19:56270729-56270779	BE2_C	brain:	n/a
41	chr19:56250127-56250177	HEEpiC	esophagus:	n/a
42	chr19:56274428-56274478	NH-A	brain:	n/a
43	chr19:56249743-56249793	PrEC	prostate:	n/a
44	chr19:56249743-56249793	SKMC	muscle:	n/a
45	chr19:56250652-56250702	MCF-7	breast:	n/a
46	chr19:56270498-56270548	SK-N-SH	brain:	n/a
47	chr19:56270498-56270548	HIPEpiC	eye:	n/a
48	chr19:56269259-56269309	MCF10A-Er-Src	breast:	n/a
49	chr19:56250127-56250177	AoSMC	blood vessel:	n/a
50	chr19:56250652-56250702	ovcar-3	ovarian:	n/a

(count:22 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:56164701..56165323-chr19:56320540..56321426,2	MCF-7	breast:
2	chr19:56320256..56321150-chr19:56577550..56578288,2	K562	blood:
3	chr19:56321292..56324216-chr19:56328648..56330959,2	K562	blood:
4	chr19:56294175..56296046-chr19:56307232..56309273,2	MCF-7	breast:
5	chr19:56311206..56314019-chr19:56318458..56321376,2	K562	blood:
6	chr19:56311206..56314019-chr19:56318458..56321376,2	K562	blood:
7	chr17:41464575..41466240-chr19:56288867..56290367,2	K562	blood:
8	chr19:56252523..56255492-chr19:56257324..56260762,3	K562	blood:
9	chr19:56294175..56296046-chr19:56307232..56309273,2	MCF-7	breast:
10	chr19:56154646..56157469-chr19:56320244..56322064,2	K562	blood:
11	chr19:56230205..56232527-chr19:56319829..56322446,2	K562	blood:
12	chr19:56238198..56240970-chr19:56241234..56244950,3	K562	blood:
13	chr19:56252523..56255492-chr19:56257324..56260762,3	K562	blood:
14	chr19:56288962..56289563-chr19:56320651..56321410,3	MCF-7	breast:
15	chr19:56271991..56273573-chr19:56281048..56283702,2	K562	blood:
16	chr19:56235628..56237563-chr19:56238929..56240909,2	K562	blood:
17	chr19:56288962..56289563-chr19:56320651..56321410,3	MCF-7	breast:
18	chr19:56235628..56237563-chr19:56238929..56240909,2	K562	blood:
19	chr19:56143497..56144412-chr19:56320540..56321434,5	K562	blood:
20	chr19:56015535..56016051-chr19:56320998..56321733,2	K562	blood:
21	chr19:56238198..56240970-chr19:56241234..56244950,3	K562	blood:
22	chr19:56271991..56273573-chr19:56281048..56283702,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RFPL4A-1	chr19:56248651-56248966	NONHSAT068080

No data

Variant related genes	Relation type
RFPL4AL1	TF binding region
RFPL4AP1	TF binding region
RN7SKP109	TF binding region
RFPL4A	TF binding region
NLRP9	TF binding region
RFPL4AL1	CpG island
RFPL4AP1	CpG island
RN7SKP109	CpG island
RFPL4A	CpG island
NLRP9	CpG island
ENSG00000171425	chromatin interactions
ENSG00000179873	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000267522	chromatin interactions

Extended variants
information (count: 2161 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:2161 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10423927	chr19:56235537-56235538	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs575608449	chr19:56235570-56235571	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs147876380	chr19:56235625-56235626	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs141497975	chr19:56235648-56235649	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs191627036	chr19:56235659-56235660	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs61624557	chr19:56235675-56235676	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs560159634	chr19:56235679-56235680	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs532143648	chr19:56235706-56235707	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs556510322	chr19:56235743-56235744	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs150012771	chr19:56235751-56235752	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs376419984	chr19:56235771-56235772	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs555088626	chr19:56235777-56235778	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs369047521	chr19:56235793-56235794	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs145230686	chr19:56235794-56235795	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs73933320	chr19:56235806-56235807	Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs562263841	chr19:56235831-56235832	Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs574768158	chr19:56235849-56235850	Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs557702774	chr19:56235865-56235866	Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs535674080	chr19:56235877-56235878	Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs539987533	chr19:56235889-56235890	Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs553929177	chr19:56235894-56235895	Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs377215403	chr19:56235916-56235917	Active TSS	n/a	n/a	Overlapped CNVs	n/a
23	rs77780005	chr19:56235968-56235969	Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs552393142	chr19:56236011-56236012	Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs28619929	chr19:56236051-56236052	Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs538045031	chr19:56236062-56236063	Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs557624437	chr19:56236088-56236089	Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs574659563	chr19:56236093-56236094	Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs577465601	chr19:56236098-56236099	Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs553516885	chr19:56236114-56236115	Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs576860326	chr19:56236116-56236117	Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs545450379	chr19:56236131-56236132	Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs562243758	chr19:56236145-56236146	Active TSS	n/a	n/a	Overlapped CNVs	n/a
34	rs576201634	chr19:56236182-56236183	Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs542033171	chr19:56236204-56236205	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs34135066	chr19:56236287-56236288	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs148882557	chr19:56236296-56236297	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs528003444	chr19:56236298-56236299	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs547769218	chr19:56236301-56236302	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs564365624	chr19:56236302-56236303	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs533375124	chr19:56236319-56236320	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs550252725	chr19:56236326-56236327	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs570188483	chr19:56236357-56236358	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs183032057	chr19:56236465-56236466	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs188465356	chr19:56236496-56236497	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs568325320	chr19:56236534-56236535	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs115457712	chr19:56236538-56236539	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs554041653	chr19:56236559-56236560	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs572086708	chr19:56236560-56236561	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs576380636	chr19:56236706-56236707	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Breast cancer	21785460	CNVD
Breast cancer	20459607	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Myelofibrosis	22110671	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Alzheimer''s disease	22166940	CNVD
Heart disease	21282601	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Glioblastoma multiforme	21922591	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Breast cancer	21509527	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Melanoma	20877625	CNVD
Breast cancer	20409316	CNVD

Chromatin state (count:71 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:56235200-56235800	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr19:56235800-56236200	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr19:56236200-56237000	Enhancers	ES-I3 Cell Line	embryonic stem cell
4	chr19:56237000-56237600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr19:56244800-56245200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr19:56264400-56265000	Enhancers	Liver	Liver
7	chr19:56264800-56265600	Enhancers	Rectal Mucosa Donor 31	rectum
8	chr19:56265000-56265400	Flanking Active TSS	Liver	Liver
9	chr19:56265000-56266000	Enhancers	Pancreas	Pancrea
10	chr19:56265400-56265600	Enhancers	Liver	Liver
11	chr19:56265400-56265800	Enhancers	Gastric	stomach
12	chr19:56265600-56265800	Flanking Active TSS	Liver	Liver
13	chr19:56265800-56268200	Weak transcription	Liver	Liver
14	chr19:56266000-56266800	Weak transcription	Pancreas	Pancrea
15	chr19:56266800-56267000	Enhancers	Pancreas	Pancrea
16	chr19:56267000-56268200	Weak transcription	Pancreas	Pancrea
17	chr19:56268000-56269800	Enhancers	Primary monocytes fromperipheralblood	blood
18	chr19:56268200-56268400	ZNF genes & repeats	Liver	Liver
19	chr19:56268200-56268400	Enhancers	Pancreas	Pancrea
20	chr19:56268400-56272600	Weak transcription	Liver	Liver
21	chr19:56269800-56270200	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr19:56270200-56271800	Enhancers	Primary monocytes fromperipheralblood	blood
23	chr19:56272600-56272800	Active TSS	Liver	Liver
24	chr19:56277000-56279600	Enhancers	Primary monocytes fromperipheralblood	blood
25	chr19:56278000-56278200	Bivalent Enhancer	Primary hematopoietic stem cells short term culture	blood
26	chr19:56279600-56280000	Weak transcription	Primary monocytes fromperipheralblood	blood
27	chr19:56280000-56281800	Enhancers	Primary monocytes fromperipheralblood	blood
28	chr19:56281200-56281800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr19:56293200-56293400	Enhancers	Hela-S3	cervix
30	chr19:56295400-56295600	ZNF genes & repeats	iPS-15b Cell Line	embryonic stem cell
31	chr19:56300600-56304000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr19:56306200-56310800	Weak transcription	Pancreas	Pancrea
33	chr19:56307400-56313400	Weak transcription	Liver	Liver
34	chr19:56312000-56313000	Enhancers	GM12878-XiMat	blood
35	chr19:56312800-56313200	Active TSS	Brain Substantia Nigra	brain
36	chr19:56312800-56313400	Enhancers	Primary B cells from peripheral blood	blood
37	chr19:56313000-56313400	Flanking Active TSS	GM12878-XiMat	blood
38	chr19:56313000-56313400	Enhancers	Hela-S3	cervix
39	chr19:56313200-56315600	Weak transcription	Brain Substantia Nigra	brain
40	chr19:56313400-56314200	Enhancers	Liver	Liver
41	chr19:56313800-56314000	Enhancers	Hela-S3	cervix
42	chr19:56315600-56316000	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
43	chr19:56315600-56316200	ZNF genes & repeats	Brain Substantia Nigra	brain
44	chr19:56316200-56320800	Weak transcription	Brain Substantia Nigra	brain
45	chr19:56318800-56319800	Weak transcription	Liver	Liver
46	chr19:56319800-56320600	Enhancers	Liver	Liver
47	chr19:56320200-56321000	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
48	chr19:56320400-56320600	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
49	chr19:56320400-56321000	ZNF genes & repeats	A549	lung
50	chr19:56320400-56321200	Enhancers	GM12878-XiMat	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links