Variant report

Variant	esv2759586
Chromosome Location	chr8:6035995-6082279
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:6079332..6082540-chr8:6084426..6086508,3	K562	blood:
2	chr8:6080157..6081666-chr8:6091415..6093477,2	MCF-7	breast:
3	chr8:6040393..6043249-chr8:6044843..6046899,2	K562	blood:
4	chr8:6040393..6043249-chr8:6044843..6046899,2	K562	blood:

Extended variants
information (count: 795 )
Associated
traits (count: 122 )

Variant overlapped rSNPs/rCNVs (count:795 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs552367481	chr8:6037410-6037411	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs562676480	chr8:6037413-6037414	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs186707214	chr8:6037414-6037415	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs373494660	chr8:6037415-6037416	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs548329340	chr8:6037423-6037424	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs190461316	chr8:6037425-6037426	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs534217734	chr8:6037452-6037453	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs548117432	chr8:6037468-6037469	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs181634480	chr8:6037474-6037475	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs2570660	chr8:6037491-6037492	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
11	rs566795763	chr8:6037503-6037504	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs151185353	chr8:6037504-6037505	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs568948788	chr8:6037512-6037513	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs140336948	chr8:6037523-6037524	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs369618407	chr8:6037525-6037526	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs575982946	chr8:6037607-6037608	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs371212305	chr8:6037608-6037609	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs144121463	chr8:6037639-6037640	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs544927253	chr8:6037648-6037649	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs146446738	chr8:6037670-6037671	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs140940216	chr8:6037679-6037680	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs2570659	chr8:6037695-6037696	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs532464336	chr8:6037703-6037704	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs546144935	chr8:6037722-6037723	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs150078609	chr8:6037729-6037730	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs531652516	chr8:6037732-6037733	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs117499840	chr8:6037742-6037743	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs534055505	chr8:6037745-6037746	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs527912154	chr8:6037774-6037775	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs547755583	chr8:6037779-6037780	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs62505617	chr8:6037780-6037781	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs374592897	chr8:6037793-6037794	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs12677038	chr8:6037794-6037795	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs35136701	chr8:6037795-6037796	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs182486886	chr8:6037815-6037816	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs188005663	chr8:6037816-6037817	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs554753725	chr8:6037848-6037849	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs540518864	chr8:6037850-6037851	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs568141842	chr8:6037870-6037871	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs534028557	chr8:6037880-6037881	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs553701450	chr8:6037895-6037896	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs577020684	chr8:6037916-6037917	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs369844136	chr8:6037940-6037941	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs145471476	chr8:6037947-6037948	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs149205089	chr8:6037992-6037993	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs143397826	chr8:6037994-6037995	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs113979218	chr8:6038028-6038029	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs561879146	chr8:6038038-6038039	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs527795973	chr8:6038040-6038041	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs541582809	chr8:6038045-6038046	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:122)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Myelofibrosis	22110671	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
abnormal development	18461090	CNVD
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Epilepsy	22083797	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495311	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Cancer	20164920	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Non-small cell lung cancer	21829676	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Prostate cancer	17217626	CNVD
Developmental delay	19128483	CNVD
Neuroticism	17667963	CNVD
Leukoplakia	24403051	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Colorectal cancer	16774939	CNVD
Breast cancer	21364760	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Cancer	20164919	CNVD
Medulloblastoma	16783165	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Melanoma	20688739	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:6037400-6038600	Enhancers	NHDF-Ad	bronchial
2	chr8:6037400-6039000	Enhancers	Hela-S3	cervix
3	chr8:6037800-6038200	Enhancers	Primary neutrophils fromperipheralblood	blood
4	chr8:6037800-6038600	Enhancers	Osteobl	bone
5	chr8:6037800-6038800	Enhancers	NH-A	brain
6	chr8:6038400-6039000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
7	chr8:6041200-6042600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
8	chr8:6041400-6042800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr8:6054800-6055200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr8:6065400-6065800	Enhancers	Primary hematopoietic stem cells short term culture	blood
11	chr8:6065400-6066200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr8:6065400-6067000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
13	chr8:6069000-6070600	Weak transcription	Right Atrium	heart
14	chr8:6069600-6072800	Enhancers	Fetal Brain Male	brain
15	chr8:6070000-6071400	Enhancers	Fetal Brain Female	brain
16	chr8:6070400-6070600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr8:6070400-6070600	Bivalent Enhancer	Hela-S3	cervix
18	chr8:6070600-6070800	Enhancers	Right Atrium	heart
19	chr8:6070600-6071200	Enhancers	Breast Myoepithelial Primary Cells	Breast
20	chr8:6071400-6071800	Weak transcription	Fetal Brain Female	brain
21	chr8:6071800-6072200	Enhancers	Fetal Brain Female	brain
22	chr8:6080800-6081800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
23	chr8:6080800-6082000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr8:6081400-6087800	Enhancers	Primary neutrophils fromperipheralblood	blood
25	chr8:6081800-6082800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr8:6082000-6082400	Enhancers	Fetal Brain Male	brain

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