Variant report

Variant	esv2759591
Chromosome Location	chr8:8707639-8747894
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:608)
CpG islands
(count:611)
Chromatin interactive
region (count:27)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:608 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:8731747-8731980	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:8719261-8719890	K562	blood:	n/a	n/a
3	ARID3A	chr8:8729320-8730247	HepG2	liver:	n/a	n/a
4	ARID3A	chr8:8732695-8733037	HepG2	liver:	n/a	n/a
5	ARID3A	chr8:8728154-8728609	HepG2	liver:	n/a	n/a
6	ARID3A	chr8:8745634-8745915	HepG2	liver:	n/a	n/a
7	ATF1	chr8:8719289-8719585	K562	blood:	n/a	n/a
8	ATF2	chr8:8741850-8742527	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF2	chr8:8740652-8740976	H1-hESC	embryonic stem cell:	n/a	n/a
10	BACH1	chr8:8719432-8719789	K562	blood:	n/a	n/a
11	BATF	chr8:8746648-8746919	GM12878	blood:	n/a	chr8:8746803-8746814
12	BCL3	chr8:8729546-8730121	A549	lung:	n/a	n/a
13	BHLHE40	chr8:8713555-8713958	GM12878	blood:	n/a	n/a
14	BHLHE40	chr8:8745821-8746045	K562	blood:	n/a	n/a
15	BHLHE40	chr8:8726737-8727392	GM12878	blood:	n/a	n/a
16	BHLHE40	chr8:8745703-8745989	GM12878	blood:	n/a	n/a
17	BHLHE40	chr8:8715438-8715635	GM12878	blood:	n/a	n/a
18	BHLHE40	chr8:8747792-8747920	GM12878	blood:	n/a	n/a
19	BHLHE40	chr8:8718429-8718547	GM12878	blood:	n/a	n/a
20	BHLHE40	chr8:8728104-8728128	GM12878	blood:	n/a	n/a
21	BHLHE40	chr8:8745720-8746081	HepG2	liver:	n/a	n/a
22	BHLHE40	chr8:8729437-8730118	HepG2	liver:	n/a	n/a
23	BHLHE40	chr8:8719280-8719562	K562	blood:	n/a	n/a
24	BHLHE40	chr8:8714189-8714819	GM12878	blood:	n/a	n/a
25	BRCA1	chr8:8746647-8746978	Hela-S3	cervix:	n/a	n/a
26	CBX3	chr8:8719083-8719874	K562	blood:	n/a	n/a
27	CCNT2	chr8:8719309-8719519	K562	blood:	n/a	n/a
28	CEBPB	chr8:8745860-8745984	H1-hESC	embryonic stem cell:	n/a	chr8:8745887-8745900
29	CEBPB	chr8:8728323-8728551	HepG2	liver:	n/a	chr8:8728486-8728497
30	CEBPB	chr8:8719205-8719798	K562	blood:	n/a	n/a
31	CEBPB	chr8:8715989-8716176	K562	blood:	n/a	chr8:8716034-8716045
32	CEBPB	chr8:8742494-8742702	K562	blood:	n/a	n/a
33	CEBPB	chr8:8711059-8711191	H1-hESC	embryonic stem cell:	n/a	n/a
34	CEBPB	chr8:8742485-8742834	MCF-7	breast:	n/a	n/a
35	CEBPB	chr8:8718234-8718400	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr8:8732448-8732635	IMR90	lung:	n/a	chr8:8732488-8732501
37	CEBPB	chr8:8724967-8725312	H1-hESC	embryonic stem cell:	n/a	n/a
38	CEBPB	chr8:8745755-8746029	HepG2	liver:	n/a	chr8:8745887-8745900
39	CEBPB	chr8:8742516-8742763	IMR90	lung:	n/a	n/a
40	CEBPB	chr8:8745192-8745335	Hela-S3	cervix:	n/a	chr8:8745225-8745236
41	CEBPB	chr8:8718065-8718613	IMR90	lung:	n/a	n/a
42	CEBPB	chr8:8730516-8730865	IMR90	lung:	n/a	n/a
43	CEBPB	chr8:8746631-8747089	ECC-1	luminal epithelium:	n/a	n/a
44	CEBPB	chr8:8742435-8742749	H1-hESC	embryonic stem cell:	n/a	n/a
45	CEBPB	chr8:8746698-8746971	Hela-S3	cervix:	n/a	n/a
46	CEBPB	chr8:8719304-8719602	K562	blood:	n/a	n/a
47	CEBPB	chr8:8742449-8742757	HepG2	liver:	n/a	n/a
48	CEBPB	chr8:8745197-8745383	K562	blood:	n/a	chr8:8745225-8745236
49	CEBPB	chr8:8716029-8716059	IMR90	lung:	n/a	chr8:8716034-8716045
50	CEBPB	chr8:8745130-8745318	A549	lung:	n/a	chr8:8745225-8745236

(count:611 , 50 per page) page: 1 2 3 4 5 6 7 ... 13

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:8747452-8747502	HRPEpiC	eye:	n/a
2	chr8:8747452-8747502	HRPEpiC	eye:	n/a
3	chr8:8742058-8742108	AG10803	skin:	n/a
4	chr8:8747297-8747347	HEK293	kidney:	embryo
5	chr8:8727303-8727353	HCM	heart:	n/a
6	chr8:8747297-8747347	IMR90	lung:	fetal
7	chr8:8742058-8742108	AG09319	gingival:	n/a
8	chr8:8747297-8747347	HCM	heart:	n/a
9	chr8:8716726-8716776	HRCEpiC	kidney:	n/a
10	chr8:8742058-8742108	AoSMC	blood vessel:	n/a
11	chr8:8729819-8729869	NHDF-neo	bronchial:	n/a
12	chr8:8729819-8729869	HAEpiC	amniotic membrane:	n/a
13	chr8:8718066-8718116	SK-N-MC	brain:	n/a
14	chr8:8747297-8747347	GM06990	blood:	n/a
15	chr8:8747452-8747502	HCF	heart:	n/a
16	chr8:8729819-8729869	GM19239	blood:	n/a
17	chr8:8735969-8736019	AoSMC	blood vessel:	n/a
18	chr8:8747297-8747347	HNPCEpiC	eye:	n/a
19	chr8:8735969-8736019	HepG2	liver:	n/a
20	chr8:8727303-8727353	HUVEC	blood vessel:	n/a
21	chr8:8727303-8727353	SKMC	muscle:	n/a
22	chr8:8735969-8736019	GM12891	blood:	n/a
23	chr8:8747297-8747347	HCT-116	colon:	n/a
24	chr8:8727303-8727353	AG09309	skin:	n/a
25	chr8:8746679-8746729	HAEpiC	amniotic membrane:	n/a
26	chr8:8735969-8736019	Hela-S3	cervix:	n/a
27	chr8:8742058-8742108	RPTEC	kidney:	n/a
28	chr8:8718066-8718116	Jurkat	blood:	n/a
29	chr8:8742058-8742108	NH-A	brain:	n/a
30	chr8:8742058-8742108	NB4	blood:	n/a
31	chr8:8747297-8747347	H1-hESC	embryonic stem cell:	embryo
32	chr8:8745938-8745988	ovcar-3	ovarian:	n/a
33	chr8:8718066-8718116	ECC-1	luminal epithelium:	n/a
34	chr8:8718066-8718116	HNPCEpiC	eye:	n/a
35	chr8:8747297-8747347	AG10803	skin:	n/a
36	chr8:8742058-8742108	GM12878	blood:	n/a
37	chr8:8742058-8742108	MCF10A-Er-Src	breast:	n/a
38	chr8:8729819-8729869	GM12878	blood:	n/a
39	chr8:8742058-8742108	PANC-1	pancreas:	n/a
40	chr8:8718066-8718116	HepG2	liver:	n/a
41	chr8:8747297-8747347	PANC-1	pancreas:	n/a
42	chr8:8716726-8716776	U87	brain:	n/a
43	chr8:8746679-8746729	ECC-1	luminal epithelium:	n/a
44	chr8:8746679-8746729	HCT-116	colon:	n/a
45	chr8:8716726-8716776	AG09319	gingival:	n/a
46	chr8:8727303-8727353	BE2_C	brain:	n/a
47	chr8:8718066-8718116	NH-A	brain:	n/a
48	chr8:8718066-8718116	HCF	heart:	n/a
49	chr8:8747297-8747347	NHBE	bronchial:	n/a
50	chr8:8742058-8742108	HEEpiC	esophagus:	n/a

(count:27 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:8718079..8719809-chr8:8729867..8732663,2	K562	blood:
2	chr8:8743895..8745799-chr8:8861981..8863756,2	K562	blood:
3	chr8:8726269..8728991-chr8:8747261..8749561,2	K562	blood:
4	chr8:8733559..8735231-chr8:8736317..8738826,2	MCF-7	breast:
5	chr8:8729141..8730774-chr8:8738935..8740883,2	MCF-7	breast:
6	chr8:8733670..8736303-chr8:8745304..8747711,2	K562	blood:
7	chr8:8729141..8730774-chr8:8738935..8740883,2	MCF-7	breast:
8	chr8:8738833..8741293-chr8:8745302..8747462,3	K562	blood:
9	chr8:8733314..8736061-chr8:8749397..8752157,3	MCF-7	breast:
10	chr8:8716471..8722141-chr8:8722765..8728048,6	K562	blood:
11	chr8:8733670..8736303-chr8:8745304..8747711,2	K562	blood:
12	chr8:8733559..8735231-chr8:8736317..8738826,2	MCF-7	breast:
13	chr8:8707079..8709143-chr8:8751442..8753018,2	MCF-7	breast:
14	chr8:8715810..8717971-chr8:8724783..8726662,2	K562	blood:
15	chr8:8736985..8740152-chr8:8748515..8752474,4	K562	blood:
16	chr8:8742135..8744016-chr8:8747118..8749376,2	K562	blood:
17	chr8:8640474..8642635-chr8:8745832..8748288,2	MCF-7	breast:
18	chr8:8728731..8732330-chr8:8733587..8735622,3	K562	blood:
19	chr8:8738833..8741293-chr8:8745302..8747462,3	K562	blood:
20	chr8:8715858..8717945-chr8:8749655..8752629,2	K562	blood:
21	chr8:8738158..8739916-chr8:8748623..8751387,2	MCF-7	breast:
22	chr8:8705274..8707873-chr8:8797138..8799236,2	K562	blood:
23	chr8:8718079..8719809-chr8:8729867..8732663,2	K562	blood:
24	chr8:8726269..8728991-chr8:8747261..8749561,2	K562	blood:
25	chr8:8637079..8641758-chr8:8747812..8752273,5	MCF-7	breast:
26	chr8:8728731..8732330-chr8:8733587..8735622,3	K562	blood:
27	chr8:8742135..8744016-chr8:8747118..8749376,2	K562	blood:

No data

Variant related genes	Relation type
MFHAS1	TF binding region
MFHAS1	CpG island
ENSG00000147324	chromatin interactions
ENSG00000254367	chromatin interactions

Extended variants
information (count: 2239 )
Associated
traits (count: 140 )

Variant overlapped rSNPs/rCNVs (count:2239 , 50 per page) page: 1 2 3 4 5 6 7 ... 45

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs7017739	chr8:8707639-8707640	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs191316665	chr8:8707651-8707652	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs562736824	chr8:8707692-8707693	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs57385246	chr8:8707708-8707709	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs572923583	chr8:8707725-8707726	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs147023651	chr8:8707755-8707756	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs558371288	chr8:8707761-8707762	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs575180222	chr8:8707818-8707819	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs115963043	chr8:8707825-8707826	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs563665137	chr8:8707873-8707874	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs573972404	chr8:8707898-8707899	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs184522941	chr8:8707907-8707908	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs187743340	chr8:8707910-8707911	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs387706	chr8:8707970-8707971	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs551998911	chr8:8707989-8707990	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
16	rs547292192	chr8:8707996-8707997	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
17	rs193294864	chr8:8708052-8708053	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
18	rs551041123	chr8:8708060-8708061	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
19	rs535089215	chr8:8708073-8708074	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
20	rs371173	chr8:8708084-8708085	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
21	rs531191333	chr8:8708089-8708090	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
22	rs73525736	chr8:8708125-8708126	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs567227380	chr8:8708156-8708157	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
24	rs535850605	chr8:8708161-8708162	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
25	rs546610430	chr8:8708186-8708187	Weak transcription Enhancers Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
26	rs185110402	chr8:8708203-8708204	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
27	rs566220687	chr8:8708206-8708207	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
28	rs538393985	chr8:8708209-8708210	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
29	rs558289516	chr8:8708220-8708221	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
30	rs190352305	chr8:8708236-8708237	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
31	rs537718197	chr8:8708249-8708250	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
32	rs142258969	chr8:8708262-8708263	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
33	rs73525737	chr8:8708283-8708284	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs542644610	chr8:8708285-8708286	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
35	rs559742265	chr8:8708315-8708316	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs376851798	chr8:8708317-8708318	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
37	rs149181304	chr8:8708343-8708344	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs374988059	chr8:8708345-8708346	Weak transcription Enhancers Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs545531562	chr8:8708416-8708417	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs181178363	chr8:8708423-8708424	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs146983228	chr8:8708430-8708431	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs531152783	chr8:8708453-8708454	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs534204154	chr8:8708463-8708464	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs551186286	chr8:8708505-8708506	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs184246172	chr8:8708526-8708527	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs188135757	chr8:8708556-8708557	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs561409513	chr8:8708571-8708572	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs180899802	chr8:8708576-8708577	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs537984985	chr8:8708581-8708582	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs546276590	chr8:8708586-8708587	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:140)

Disease	PMID	Source
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Autism	22495311	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16774939	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	21990379	CNVD
Psoriasis	20403174	CNVD
Psoriasis	20663923	CNVD
Crohn''s disease	16909382	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Crohn''s disease	20877625	CNVD
Inflammatory disorder	20877625	CNVD
Cardiac defect	21933911	CNVD
Psoriasis	18059266	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Psoriasis	20877625	CNVD
Mental retardation	17847001	CNVD
Prostate cancer	17217626	CNVD
Schizophrenia	21399695	CNVD
Colorectal cancer	21128281	CNVD
Colorectal cancer	19455253	CNVD
Psoriasis	18848619	CNVD
Squamous cell cancer	19047905	CNVD
Colorectal cancer	17229543	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Bladder cancer	21909424	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Developmental disorder	20461109	CNVD
abnormal development	18461090	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Glioblastoma multiforme	21138945	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Bipolar disorder	19114987	CNVD
Gastric cancer	17229543	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:2368 , 50 per page) page: 1 2 3 4 5 6 7 ... 48

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:8692200-8717600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
2	chr8:8699400-8729600	Weak transcription	Fetal Stomach	stomach
3	chr8:8700200-8708000	Weak transcription	Spleen	Spleen
4	chr8:8701000-8707800	Enhancers	Fetal Intestine Large	intestine
5	chr8:8701400-8708400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
6	chr8:8702200-8726000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr8:8702200-8726400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr8:8702400-8708000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr8:8702400-8708200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr8:8702400-8708200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr8:8702400-8708400	Weak transcription	NH-A	brain
12	chr8:8702400-8709600	Weak transcription	Skeletal Muscle Female	skeletal muscle
13	chr8:8702400-8713600	Weak transcription	Gastric	stomach
14	chr8:8703000-8725200	Weak transcription	Hela-S3	cervix
15	chr8:8703200-8709400	Weak transcription	Psoas Muscle	Psoas
16	chr8:8703600-8713600	Weak transcription	Brain Substantia Nigra	brain
17	chr8:8704200-8709400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr8:8704400-8708400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr8:8705000-8708200	Weak transcription	HSMM	muscle
20	chr8:8705000-8723600	Weak transcription	Fetal Muscle Leg	muscle
21	chr8:8705200-8709600	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr8:8705600-8708800	Enhancers	Primary B cells from cord blood	blood
23	chr8:8705800-8708000	Weak transcription	HSMMtube	muscle
24	chr8:8705800-8708400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
25	chr8:8705800-8708800	Weak transcription	Brain Anterior Caudate	brain
26	chr8:8705800-8709400	Weak transcription	Right Ventricle	heart
27	chr8:8705800-8713600	Weak transcription	Aorta	Aorta
28	chr8:8705800-8716800	Weak transcription	Dnd41	blood
29	chr8:8706000-8708000	Weak transcription	H1 Cell Line	embryonic stem cell
30	chr8:8706000-8708000	Enhancers	Rectal Mucosa Donor 31	rectum
31	chr8:8706000-8708000	Weak transcription	Right Atrium	heart
32	chr8:8706000-8708400	Weak transcription	H9 Cell Line	embryonic stem cell
33	chr8:8706000-8708400	Weak transcription	Fetal Heart	heart
34	chr8:8706000-8710600	Enhancers	Stomach Mucosa	stomach
35	chr8:8706200-8707800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr8:8706200-8709600	Enhancers	Primary T killer memory cells from peripheral blood	blood
37	chr8:8706200-8709800	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
38	chr8:8706200-8713600	Weak transcription	Fetal Brain Female	brain
39	chr8:8706200-8714000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr8:8706200-8717400	Weak transcription	Brain Hippocampus Middle	brain
41	chr8:8706200-8717800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
42	chr8:8706400-8708000	Weak transcription	Thymus	Thymus
43	chr8:8706400-8708400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr8:8706400-8708400	Weak transcription	Duodenum Smooth Muscle	Duodenum
45	chr8:8706400-8708800	Enhancers	Primary T cells fromperipheralblood	blood
46	chr8:8706400-8709000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
47	chr8:8706400-8709400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
48	chr8:8706400-8709600	Enhancers	Primary T cells from cord blood	blood
49	chr8:8706400-8709800	Enhancers	Primary T helper naive cells fromperipheralblood	blood
50	chr8:8706400-8710200	Weak transcription	Brain Germinal Matrix	brain

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links