Variant report
Variant | esv2760206 |
---|---|
Chromosome Location | chr11:50203494-51096372 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2634)
- CpG islands (count:2319)
- Chromatin interactive region (count:3)
- LncRNA region (count:47)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr11:50712564-50712666 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr11:50741510-50741536 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr11:50728352-50728528 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr11:50676160-50676529 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr11:50409411-50409611 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr11:50257555-50257921 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr11:50755176-50755720 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr11:50721580-50721799 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr11:50767721-50767932 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr11:50381201-50381204 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr11:50771363-50771551 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr11:50757990-50758182 | K562 | blood: | n/a | n/a |
13 | ATF3 | chr11:50257564-50257818 | K562 | blood: | n/a | chr11:50257726-50257746 chr11:50257724-50257737 chr11:50257584-50257592 chr11:50257723-50257738 chr11:50257725-50257736 |
14 | BACH1 | chr11:50741715-50742187 | K562 | blood: | n/a | n/a |
15 | BACH1 | chr11:50769674-50770049 | K562 | blood: | n/a | n/a |
16 | BACH1 | chr11:50739007-50739300 | K562 | blood: | n/a | n/a |
17 | BACH1 | chr11:50744265-50744293 | K562 | blood: | n/a | n/a |
18 | BACH1 | chr11:50762679-50763056 | K562 | blood: | n/a | n/a |
19 | BACH1 | chr11:50765324-50765524 | K562 | blood: | n/a | n/a |
20 | BACH1 | chr11:50759699-50760188 | K562 | blood: | n/a | n/a |
21 | BACH1 | chr11:50780465-50780837 | K562 | blood: | n/a | n/a |
22 | BACH1 | chr11:50699638-50700011 | K562 | blood: | n/a | n/a |
23 | BACH1 | chr11:50767401-50767428 | K562 | blood: | n/a | n/a |
24 | BATF | chr11:50649412-50649706 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr11:50676256-50676541 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr11:50676209-50676542 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr11:50723560-50724069 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr11:50251866-50252053 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr11:50685636-50685821 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr11:50700733-50700935 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr11:50757466-50757719 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr11:50687048-50687278 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr11:50764082-50764319 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr11:50770838-50771135 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr11:50756360-50756521 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr11:50681509-50681669 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr11:50711195-50711416 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr11:50721484-50721792 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr11:50779460-50779823 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr11:50671779-50671988 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr11:50722179-50722655 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr11:50668601-50668765 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr11:50782290-50782554 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr11:50755495-50755763 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr11:50767583-50768188 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr11:50749839-50750367 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr11:50670735-50670974 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr11:50768336-50768651 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr11:50761809-50762209 | GM12878 | blood: | n/a | n/a |
50 | BATF | chr11:50711202-50711412 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:50227265-50227315 | AoSMC | blood vessel: | n/a |
2 | chr11:50227265-50227315 | AoSMC | blood vessel: | n/a |
3 | chr11:50257752-50257802 | SAEC | small airway: | n/a |
4 | chr11:50234973-50235023 | MCF10A-Er-Src | breast: | n/a |
5 | chr11:50260762-50260812 | K562 | blood: | n/a |
6 | chr11:50219952-50220002 | AG10803 | skin: | n/a |
7 | chr11:50257625-50257675 | GM06990 | blood: | n/a |
8 | chr11:50368251-50368301 | HEK293 | kidney: | embryo |
9 | chr11:50260762-50260812 | MCF-7 | breast: | n/a |
10 | chr11:50206530-50206580 | PANC-1 | pancreas: | n/a |
11 | chr11:50227476-50227526 | HEK293 | kidney: | embryo |
12 | chr11:50206561-50206611 | A549 | lung: | n/a |
13 | chr11:50227199-50227249 | GM19239 | blood: | n/a |
14 | chr11:50257496-50257546 | RPTEC | kidney: | n/a |
15 | chr11:50206530-50206580 | Hela-S3 | cervix: | n/a |
16 | chr11:50220389-50220439 | HPAEpiC | pulmonary alveolar: | n/a |
17 | chr11:50220426-50220476 | GM12892 | blood: | n/a |
18 | chr11:50258273-50258323 | ProgFib | skin: | n/a |
19 | chr11:50227199-50227249 | HEEpiC | esophagus: | n/a |
20 | chr11:50219952-50220002 | NHBE | bronchial: | n/a |
21 | chr11:50220389-50220439 | HMEC | breast: | n/a |
22 | chr11:50368251-50368301 | AG04450 | lung: | fetal |
23 | chr11:50258750-50258800 | ECC-1 | luminal epithelium: | n/a |
24 | chr11:50368251-50368301 | HUVEC | blood vessel: | n/a |
25 | chr11:50241016-50241066 | GM12891 | blood: | n/a |
26 | chr11:50236153-50236203 | AG09309 | skin: | n/a |
27 | chr11:50257752-50257802 | Caco-2 | colon: | n/a |
28 | chr11:50220055-50220105 | SK-N-MC | brain: | n/a |
29 | chr11:50238009-50238059 | IMR90 | lung: | fetal |
30 | chr11:50206530-50206580 | ProgFib | skin: | n/a |
31 | chr11:50206561-50206611 | Jurkat | blood: | n/a |
32 | chr11:50219952-50220002 | HRE | kidney: | n/a |
33 | chr11:50219952-50220002 | HepG2 | liver: | n/a |
34 | chr11:50231261-50231311 | PrEC | prostate: | n/a |
35 | chr11:50238107-50238157 | AG04449 | skin: | fetal |
36 | chr11:50254503-50254553 | CMK | blood: | n/a |
37 | chr11:50220389-50220439 | HAEpiC | amniotic membrane: | n/a |
38 | chr11:50206606-50206656 | ECC-1 | luminal epithelium: | n/a |
39 | chr11:50227476-50227526 | PANC-1 | pancreas: | n/a |
40 | chr11:50257752-50257802 | PANC-1 | pancreas: | n/a |
41 | chr11:50231261-50231311 | HL-60 | blood: | n/a |
42 | chr11:50238214-50238264 | NH-A | brain: | n/a |
43 | chr11:50238214-50238264 | GM12878 | blood: | n/a |
44 | chr11:50227265-50227315 | HMEC | breast: | n/a |
45 | chr11:50257625-50257675 | GM12878 | blood: | n/a |
46 | chr11:50220426-50220476 | SK-N-MC | brain: | n/a |
47 | chr11:50231261-50231311 | GM06990 | blood: | n/a |
48 | chr11:50227476-50227526 | NH-A | brain: | n/a |
49 | chr11:50234973-50235023 | NHDF-neo | bronchial: | n/a |
50 | chr11:50220343-50220393 | PrEC | prostate: | n/a |
(count:3 , 50 per page) page:
1
(count:47 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-OR4C13-7 | chr11:50320143-50320239 | NONHSAT021340 |
2 | lnc-OR4C13-1 | chr11:50261115-50261299 | NONHSAT021336 |
3 | lnc-OR4C13-7 | chr11:50320710-50320877 | NONHSAT021340 |
4 | lnc-OR4C13-7 | chr11:50274586-50274778 | NONHSAT021338 |
5 | lnc-OR4C13-9 | chr11:50378065-50378165 | NONHSAT021345 |
6 | lnc-OR4C13-9 | chr11:50376439-50376850 | NONHSAT021345 |
7 | lnc-OR4C13-1 | chr11:50263752-50263827 | NONHSAT021336 |
8 | lnc-OR4C13-1 | chr11:50257789-50258088 | ENSG00000254518 |
9 | lnc-OR4C13-1 | chr11:50262310-50262433 | ENSG00000254518 |
10 | lnc-OR4C13-1 | chr11:50257750-50258210 | NONHSAT021336 |
11 | lnc-OR4C13-7 | chr11:50301079-50301142 | NONHSAT021343 |
12 | lnc-OR4C13-9 | chr11:50379775-50379803 | NONHSAT021345 |
13 | lnc-OR4C13-1 | chr11:50263752-50263827 | ENSG00000254518 |
14 | lnc-OR4C13-9 | chr11:50368318-50368359 | NONHSAT021344 |
15 | lnc-OR4C12-1 | chr11:50231598-50231759 | XLOC_009440 |
16 | lnc-OR4C12-1 | chr11:50232840-50233106 | XLOC_009440 |
17 | lnc-OR4C13-9 | chr11:50368318-50368359 | NR_024504 |
18 | lnc-OR4C13-9 | chr11:50368739-50368821 | NONHSAT021344 |
19 | lnc-OR4C13-1 | chr11:50257750-50258088 | ENSG00000254518 |
20 | lnc-OR4C13-7 | chr11:50302810-50303098 | NONHSAT021342 |
21 | lnc-OR4C13-1 | chr11:50261115-50261299 | ENSG00000254518 |
22 | lnc-OR4C13-7 | chr11:50280085-50280169 | NONHSAT021339 |
23 | lnc-OR4C13-9 | chr11:50379775-50379802 | NR_024504 |
24 | lnc-OR4C13-7 | chr11:50280085-50280169 | NONHSAT021340 |
25 | lnc-OR4C13-9 | chr11:50368739-50368821 | NR_024504 |
26 | lnc-OR4C13-7 | chr11:50266792-50266965 | NONHSAT021338 |
27 | lnc-OR4C13-7 | chr11:50302810-50303035 | NONHSAT021343 |
28 | lnc-OR4C13-7 | chr11:50313156-50313246 | NONHSAT021340 |
29 | lnc-OR4C13-9 | chr11:50378065-50378165 | NR_024504 |
30 | lnc-OR4C13-7 | chr11:50274586-50274767 | NONHSAT021339 |
31 | lnc-OR4C13-7 | chr11:50266792-50266898 | NONHSAT021339 |
32 | lnc-OR4C13-7 | chr11:50279538-50279677 | NONHSAT021340 |
33 | lnc-OR4C13-9 | chr11:50379313-50379802 | NONHSAT021344 |
34 | lnc-OR4C13-7 | chr11:50302810-50302996 | NONHSAT021339 |
35 | lnc-OR4C13-9 | chr11:50375274-50375391 | NR_024504 |
36 | lnc-OR4C13-1 | chr11:50262310-50262433 | NONHSAT021336 |
37 | lnc-OR4C13-7 | chr11:50279839-50280169 | NONHSAT021342 |
38 | lnc-OR4C13-7 | chr11:50279538-50279677 | NONHSAT021339 |
39 | lnc-OR4C13-7 | chr11:50274586-50274767 | NONHSAT021340 |
40 | lnc-OR4C13-9 | chr11:50376439-50376850 | NONHSAT021344 |
41 | lnc-OR4C13-9 | chr11:50379313-50379548 | NONHSAT021345 |
42 | lnc-OR4C13-9 | chr11:50378065-50378165 | NONHSAT021344 |
43 | lnc-OR4C13-9 | chr11:50379313-50379548 | NR_024504 |
44 | lnc-OR4C13-9 | chr11:50375235-50375391 | NONHSAT021344 |
45 | lnc-OR4C13-7 | chr11:50266852-50266898 | NONHSAT021340 |
46 | lnc-OR4C13-7 | chr11:50301870-50302020 | NONHSAT021343 |
47 | lnc-OR4C13-9 | chr11:50375235-50375391 | NONHSAT021345 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000254518 | TF binding region |
ENSG00000255042 | TF binding region |
ENSG00000255500 | TF binding region |
ENSG00000254840 | TF binding region |
ENSG00000255001 | TF binding region |
ENSG00000236919 | TF binding region |
ENSG00000214883 | TF binding region |
ENSG00000254518 | CpG island |
ENSG00000255042 | CpG island |
ENSG00000255500 | CpG island |
ENSG00000254840 | CpG island |
ENSG00000255001 | CpG island |
ENSG00000236919 | CpG island |
ENSG00000214883 | CpG island |
ENSG00000254518 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs141558517 | chr11:50203515-50203516 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs371613699 | chr11:50203535-50203536 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs552154113 | chr11:50203558-50203559 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs572429119 | chr11:50203571-50203572 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs116474797 | chr11:50203578-50203579 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs188306998 | chr11:50203612-50203613 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs200455422 | chr11:50203645-50203646 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs80203699 | chr11:50203653-50203654 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs397848713 | chr11:50203654-50203655 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs373521220 | chr11:50203655-50203656 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs376420310 | chr11:50203656-50203657 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs67946367 | chr11:50203660-50203661 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs574157659 | chr11:50203712-50203713 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs564155639 | chr11:50203717-50203718 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs533115624 | chr11:50203825-50203826 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs150884362 | chr11:50203854-50203855 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs573249228 | chr11:50203902-50203903 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs58417622 | chr11:50204047-50204048 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs398016064 | chr11:50204059-50204060 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs376327425 | chr11:50204086-50204087 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs545299807 | chr11:50204089-50204090 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs545694755 | chr11:50204096-50204097 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs564896566 | chr11:50204138-50204139 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs139655993 | chr11:50204146-50204147 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs61891490 | chr11:50204167-50204168 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
26 | rs181551502 | chr11:50206210-50206211 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs186276170 | chr11:50206211-50206212 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs572255148 | chr11:50206212-50206213 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
29 | rs540934183 | chr11:50206213-50206214 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs201204399 | chr11:50206229-50206230 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs549783655 | chr11:50206305-50206306 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
32 | rs530191649 | chr11:50206306-50206307 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
33 | rs79348947 | chr11:50206322-50206323 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
34 | rs12360817 | chr11:50206323-50206324 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
35 | rs543091240 | chr11:50206353-50206354 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
36 | rs535790662 | chr11:50206358-50206359 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs563430993 | chr11:50206368-50206369 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs190738282 | chr11:50206391-50206392 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs141452844 | chr11:50206396-50206397 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs6597892 | chr11:50206408-50206409 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
41 | rs375064402 | chr11:50206416-50206417 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs548129049 | chr11:50206438-50206439 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
43 | rs182910667 | chr11:50206441-50206442 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs533395888 | chr11:50206453-50206454 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
45 | rs549993375 | chr11:50206460-50206461 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
46 | rs117148809 | chr11:50206482-50206483 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
47 | rs535578980 | chr11:50206531-50206532 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs372564803 | chr11:50206533-50206534 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
49 | rs565551623 | chr11:50206549-50206550 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
50 | rs534575703 | chr11:50206551-50206552 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Chordoma | 21602918 | CNVD |
Breast cancer | 21949216 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 19222835 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Beckwith-Wiedemann syndrome | 21518781 | CNVD |
Wilms tumour | 21518781 | CNVD |
Hepatoblastoma | 21518781 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Wilms tumour | 21544195 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Gastric cancer | 17908304 | CNVD |
Multiple myeloma | 20724749 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Autism | 22495311 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Intellectual disability | 22102821 | CNVD |
Renal cell carcinoma | 18194544 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Potocki-Shaffer syndrome | 19222835 | CNVD |
WAGR syndrome | 19222835 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 16608533 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Follicular lymphoma | 20505157 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
Breast cancer | 21364760 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21990379 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Intellectual disability | 22045946 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Schizophrenia | 23813976 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Mortal | 21835882 | CNVD |
Autism | 22495309 | CNVD |
Melanoma | 20877625 | CNVD |
Ovarian cancer | 21781307 | CNVD |
Breast cancer | 22522925 | CNVD |
Breast cancer | 21785460 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 17142309 | CNVD |
Bipolar disorder | 19214233 | CNVD |
Medulloblastoma | 21163964 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Cancer | 20164919 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Schizophrenia | 21346763 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:50202200-50204200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
2 | chr11:50206200-50207200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
3 | chr11:50217000-50218200 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
4 | chr11:50220000-50220800 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
5 | chr11:50220600-50221200 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
6 | chr11:50238000-50238400 | ZNF genes & repeats | Esophagus | oesophagus |
7 | chr11:50242200-50242400 | ZNF genes & repeats | Placenta | Placenta |
8 | chr11:50242400-50246200 | Weak transcription | Placenta | Placenta |
9 | chr11:50246400-50256200 | Weak transcription | Placenta | Placenta |
10 | chr11:50250800-50256200 | Weak transcription | K562 | blood |
11 | chr11:50256200-50256400 | Enhancers | Placenta | Placenta |
12 | chr11:50256200-50258600 | Active TSS | K562 | blood |
13 | chr11:50256400-50256800 | Flanking Active TSS | Placenta | Placenta |
14 | chr11:50256800-50257200 | Active TSS | Placenta | Placenta |
15 | chr11:50257000-50258200 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
16 | chr11:50257200-50257400 | Flanking Active TSS | Placenta | Placenta |
17 | chr11:50257200-50257600 | Active TSS | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
18 | chr11:50257200-50257600 | Active TSS | H9 Derived Neuron Cultured Cells | ES cell derived |
19 | chr11:50257200-50257600 | Active TSS | Primary T cells fromperipheralblood | blood |
20 | chr11:50257200-50257600 | Active TSS | Primary T regulatory cells fromperipheralblood | blood |
21 | chr11:50257200-50257600 | Active TSS | Brain Cingulate Gyrus | brain |
22 | chr11:50257200-50257600 | ZNF genes & repeats | Fetal Intestine Small | intestine |
23 | chr11:50257200-50257600 | ZNF genes & repeats | Fetal Stomach | stomach |
24 | chr11:50257200-50257600 | Active TSS | Ovary | ovary |
25 | chr11:50257200-50257600 | Active TSS | Psoas Muscle | Psoas |
26 | chr11:50257200-50257600 | Active TSS | Right Atrium | heart |
27 | chr11:50257200-50257600 | Active TSS | Right Ventricle | heart |
28 | chr11:50257200-50257600 | Active TSS | Skeletal Muscle Female | skeletal muscle |
29 | chr11:50257200-50257600 | Active TSS | Stomach Smooth Muscle | stomach |
30 | chr11:50257200-50257600 | Active TSS | HSMM | muscle |
31 | chr11:50257200-50258000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
32 | chr11:50257200-50258000 | ZNF genes & repeats | Gastric | stomach |
33 | chr11:50257200-50258000 | ZNF genes & repeats | Pancreas | Pancrea |
34 | chr11:50257200-50258200 | ZNF genes & repeats | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
35 | chr11:50257400-50258000 | Active TSS | Fetal Lung | lung |
36 | chr11:50257400-50258800 | ZNF genes & repeats | Placenta | Placenta |
37 | chr11:50258000-50260600 | Weak transcription | Gastric | stomach |
38 | chr11:50258800-50274600 | Weak transcription | Placenta | Placenta |
39 | chr11:50260600-50260800 | ZNF genes & repeats | Gastric | stomach |
40 | chr11:50274600-50275400 | Strong transcription | Placenta | Placenta |
41 | chr11:50275400-50277000 | Weak transcription | Placenta | Placenta |
42 | chr11:50295800-50296200 | Enhancers | Adipose Nuclei | Adipose |
43 | chr11:50324400-50325400 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
44 | chr11:50326400-50345800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
45 | chr11:50326600-50328800 | ZNF genes & repeats | Liver | Liver |
46 | chr11:50330000-50331600 | ZNF genes & repeats | Liver | Liver |
47 | chr11:50337400-50343400 | ZNF genes & repeats | Liver | Liver |
48 | chr11:50337600-50341800 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
49 | chr11:50340600-50341400 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
50 | chr11:50341600-50345800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |