Variant report

Variant	esv2760523
Chromosome Location	chr19:53319104-53364138
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:739)
CpG islands
(count:1160)
Chromatin interactive
region (count:17)
LncRNA
region (count:21)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:739 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	BACH1	chr19:53360719-53361014	H1-hESC	embryonic stem cell:	n/a	n/a
2	BACH1	chr19:53324738-53324945	H1-hESC	embryonic stem cell:	n/a	n/a
3	BATF	chr19:53336721-53337013	GM12878	blood:	n/a	chr19:53336917-53336927 chr19:53336913-53336923 chr19:53336723-53336732 chr19:53336898-53336906
4	BATF	chr19:53336688-53337003	GM12878	blood:	n/a	chr19:53336917-53336927 chr19:53336913-53336923 chr19:53336723-53336732 chr19:53336898-53336906
5	BCL11A	chr19:53362420-53362624	GM12878	blood:	n/a	n/a
6	BCL11A	chr19:53360679-53360916	GM12878	blood:	n/a	chr19:53360828-53360837
7	BHLHE40	chr19:53360687-53361035	GM12878	blood:	n/a	chr19:53360820-53360836 chr19:53360998-53361014
8	BHLHE40	chr19:53324867-53324898	K562	blood:	n/a	n/a
9	CBX3	chr19:53324640-53325255	K562	blood:	n/a	n/a
10	CBX3	chr19:53360595-53361343	K562	blood:	n/a	n/a
11	CCNT2	chr19:53361004-53361276	K562	blood:	n/a	n/a
12	CEBPB	chr19:53329012-53329572	K562	blood:	n/a	n/a
13	CEBPB	chr19:53329092-53329271	MCF-7	breast:	n/a	n/a
14	CEBPB	chr19:53345961-53346152	A549	lung:	n/a	chr19:53346019-53346030
15	CEBPB	chr19:53363042-53363321	K562	blood:	n/a	n/a
16	CEBPB	chr19:53329098-53329325	K562	blood:	n/a	n/a
17	CEBPB	chr19:53329163-53329370	H1-hESC	embryonic stem cell:	n/a	n/a
18	CEBPB	chr19:53345864-53346169	IMR90	lung:	n/a	chr19:53346019-53346030
19	CEBPB	chr19:53345865-53346133	HepG2	liver:	n/a	chr19:53346019-53346030
20	CEBPB	chr19:53363179-53363319	H1-hESC	embryonic stem cell:	n/a	n/a
21	CEBPB	chr19:53363838-53364091	IMR90	lung:	n/a	n/a
22	CEBPB	chr19:53319087-53319167	HepG2	liver:	n/a	chr19:53319119-53319130
23	CEBPB	chr19:53328995-53329384	K562	blood:	n/a	n/a
24	CEBPD	chr19:53329085-53329417	K562	blood:	n/a	n/a
25	CEBPD	chr19:53360693-53360926	HepG2	liver:	n/a	n/a
26	CHD2	chr19:53360719-53360909	K562	blood:	n/a	n/a
27	CHD2	chr19:53360829-53361263	GM12878	blood:	n/a	n/a
28	CTCF	chr19:53360960-53361110	GM12869	blood:	n/a	chr19:53360990-53361003
29	CTCF	chr19:53324785-53325148	K562	blood:	n/a	chr19:53325004-53325017
30	CTCF	chr19:53324945-53324956	GM12892	blood:	n/a	n/a
31	CTCF	chr19:53325000-53325150	HCPEpiC	choroid plexus:	n/a	chr19:53325004-53325017
32	CTCF	chr19:53346656-53346707	GM13976	blood:	n/a	n/a
33	CTCF	chr19:53360924-53361043	Kidney_OC	kidney:	n/a	chr19:53360990-53361003
34	CTCF	chr19:53325357-53325460	LNCaP	prostate:	n/a	n/a
35	CTCF	chr19:53361020-53361170	AG09309	skin:	n/a	n/a
36	CTCF	chr19:53360919-53361045	GM19240	blood:	n/a	chr19:53360990-53361003
37	CTCF	chr19:53325011-53325045	GM12878	blood:	n/a	n/a
38	CTCF	chr19:53360901-53361081	K562	blood:	n/a	chr19:53360990-53361003
39	CTCF	chr19:53360909-53361007	LNCaP	prostate:	n/a	chr19:53360990-53361003
40	CTCF	chr19:53361020-53361170	BJ	skin:	n/a	n/a
41	CTCF	chr19:53360855-53360873	NHEK	skin:	n/a	n/a
42	CTCF	chr19:53361020-53361170	HCM	heart:	n/a	n/a
43	CTCF	chr19:53361000-53361150	HRPEpiC	eye:	n/a	n/a
44	CTCF	chr19:53324940-53325090	AG04449	skin:	n/a	chr19:53325004-53325017
45	CTCF	chr19:53324938-53325019	MCF-7	breast:	n/a	chr19:53325004-53325017
46	CTCF	chr19:53360980-53361130	HCT-116	colon:	n/a	chr19:53360990-53361003
47	CTCF	chr19:53360927-53361017	Hela-S3	cervix:	n/a	chr19:53360990-53361003
48	CTCF	chr19:53324960-53325110	HMEC	breast:	n/a	chr19:53325004-53325017
49	CTCF	chr19:53324966-53325041	GM19239	blood:	n/a	chr19:53325004-53325017
50	CTCF	chr19:53361020-53361170	AG10803	skin:	n/a	n/a

(count:1160 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53363482-53363532	NHBE	bronchial:	n/a
2	chr19:53363482-53363532	NHBE	bronchial:	n/a
3	chr19:53326091-53326141	Jurkat	blood:	n/a
4	chr19:53326219-53326269	HPAEpiC	pulmonary alveolar:	n/a
5	chr19:53326091-53326141	SK-N-SH_RA	brain:	n/a
6	chr19:53360728-53360778	AG09319	gingival:	n/a
7	chr19:53326091-53326141	SKMC	muscle:	n/a
8	chr19:53357134-53357184	AG04450	lung:	fetal
9	chr19:53344366-53344416	NT2-D1	testis:	n/a
10	chr19:53362925-53362975	SK-N-SH_RA	brain:	n/a
11	chr19:53361066-53361116	AG04449	skin:	fetal
12	chr19:53363482-53363532	HCF	heart:	n/a
13	chr19:53362925-53362975	HCPEpiC	choroid plexus:	n/a
14	chr19:53361066-53361116	PANC-1	pancreas:	n/a
15	chr19:53325104-53325154	HCPEpiC	choroid plexus:	n/a
16	chr19:53324278-53324328	Hela-S3	cervix:	n/a
17	chr19:53342580-53342630	AG09319	gingival:	n/a
18	chr19:53360728-53360778	SK-N-SH	brain:	n/a
19	chr19:53360728-53360778	SKMC	muscle:	n/a
20	chr19:53325080-53325130	SAEC	small airway:	n/a
21	chr19:53326091-53326141	GM06990	blood:	n/a
22	chr19:53359733-53359783	K562	blood:	n/a
23	chr19:53363482-53363532	H1-hESC	embryonic stem cell:	embryo
24	chr19:53361448-53361498	NHBE	bronchial:	n/a
25	chr19:53357134-53357184	U87	brain:	n/a
26	chr19:53325913-53325963	PANC-1	pancreas:	n/a
27	chr19:53361448-53361498	PANC-1	pancreas:	n/a
28	chr19:53325080-53325130	Hepatocyte	liver:	n/a
29	chr19:53324732-53324782	HCPEpiC	choroid plexus:	n/a
30	chr19:53357134-53357184	HIPEpiC	eye:	n/a
31	chr19:53357134-53357184	MCF10A-Er-Src	breast:	n/a
32	chr19:53361164-53361214	HRE	kidney:	n/a
33	chr19:53325913-53325963	SAEC	small airway:	n/a
34	chr19:53342580-53342630	HEEpiC	esophagus:	n/a
35	chr19:53324732-53324782	GM06990	blood:	n/a
36	chr19:53361448-53361498	Hela-S3	cervix:	n/a
37	chr19:53324278-53324328	HL-60	blood:	n/a
38	chr19:53360728-53360778	K562	blood:	n/a
39	chr19:53359733-53359783	HRCEpiC	kidney:	n/a
40	chr19:53324732-53324782	HEEpiC	esophagus:	n/a
41	chr19:53360728-53360778	HPAEpiC	pulmonary alveolar:	n/a
42	chr19:53326091-53326141	GM19239	blood:	n/a
43	chr19:53324732-53324782	HUVEC	blood vessel:	n/a
44	chr19:53359733-53359783	GM12878	blood:	n/a
45	chr19:53342580-53342630	SK-N-SH_RA	brain:	n/a
46	chr19:53325080-53325130	Caco-2	colon:	n/a
47	chr19:53324198-53324248	A549	lung:	n/a
48	chr19:53326091-53326141	T-47D	breast:	n/a
49	chr19:53324732-53324782	ProgFib	skin:	n/a
50	chr19:53361066-53361116	PrEC	prostate:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:53324497..53325251-chr19:53360339..53360857,4	MCF-7	breast:
2	chr19:53338835..53341536-chr19:53343202..53344870,2	K562	blood:
3	chr19:53193532..53195862-chr19:53359115..53361191,3	K562	blood:
4	chr19:53339213..53341134-chr20:46203984..46206130,2	MCF-7	breast:
5	chr19:53322321..53326212-chr19:53359240..53361245,4	K562	blood:
6	chr19:53322321..53326212-chr19:53359321..53361245,3	K562	blood:
7	chr19:53322321..53326212-chr19:53359240..53361245,4	K562	blood:
8	chr19:53359564..53361265-chr19:53424872..53426783,2	MCF-7	breast:
9	chr19:53324497..53325251-chr19:53360339..53360857,4	MCF-7	breast:
10	chr19:53335113..53339470-chr19:53340101..53344099,5	K562	blood:
11	chr19:53324563..53325122-chr19:53360322..53360852,2	NB4	blood:
12	chr19:53359757..53362433-chr19:53464752..53467349,2	MCF-7	breast:
13	chr19:53357060..53358583-chr19:53400479..53402706,2	MCF-7	breast:
14	chr19:53335113..53339470-chr19:53340101..53344099,5	K562	blood:
15	chr19:53324392..53324894-chr19:53934932..53935516,2	MCF-7	breast:
16	chr19:53322321..53326212-chr19:53359321..53361245,3	K562	blood:
17	chr19:53338835..53341536-chr19:53343202..53344870,2	K562	blood:

(count:21 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF468-1	chr19:53357511-53357598	NR_102300
2	lnc-ZNF468-1	chr19:53357125-53357379	NR_102301
3	lnc-ZNF468-1	chr19:53341785-53345404	NR_102300
4	lnc-ZNF468-1	chr19:53357125-53357379	NR_102299
5	lnc-ZNF468-1	chr19:53360825-53360902	NR_102300
6	lnc-ZNF468-1	chr19:53357511-53357598	NR_102299
7	lnc-ZNF468-3	chr19:53324839-53324886	NONHSAT067588
8	lnc-ZNF468-1	chr19:53341785-53345404	NR_102301
9	lnc-ZNF468-3	chr19:53321197-53321281	NONHSAT067589
10	lnc-ZNF468-1	chr19:53360825-53360902	NR_102299
11	lnc-ZNF468-1	chr19:53360825-53360902	NR_102301
12	lnc-ZNF468-1	chr19:53352340-53352466	NR_102299
13	lnc-ZNF468-1	chr19:53341785-53345404	NR_102299
14	lnc-ZNF468-1	chr19:53348432-53348549	NR_102299
15	lnc-ZNF468-1	chr19:53357125-53357360	NR_102300
16	lnc-ZNF468-1	chr19:53352340-53352466	NR_102301
17	lnc-ZNF468-1	chr19:53348432-53348549	NR_102300
18	lnc-ZNF468-1	chr19:53352340-53352466	NR_102300
19	lnc-ZNF468-1	chr19:53357511-53357598	NR_102301
20	lnc-ZNF701-2	chr19:53342913-53343520	NONHSAT067585
21	lnc-ZNF468-3	chr19:53321197-53321284	NONHSAT067588

No data

Variant related genes	Relation type
ZNF28	TF binding region
ZNF468	TF binding region
ZNF28	CpG island
ZNF468	CpG island
ENSG00000213793	chromatin interactions
ENSG00000269646	chromatin interactions
ENSG00000221874	chromatin interactions
ENSG00000198538	chromatin interactions
ENSG00000167766	chromatin interactions
ENSG00000241015	chromatin interactions
ENSG00000182986	chromatin interactions
ENSG00000180257	chromatin interactions
ENSG00000204604	chromatin interactions
ENSG00000160336	chromatin interactions

Extended variants
information (count: 2547 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:2547 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs112493122	chr19:53319113-53319114	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs10415522	chr19:53319117-53319118	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs539545036	chr19:53319145-53319146	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs191757771	chr19:53319150-53319151	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs112211891	chr19:53319163-53319164	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs564114614	chr19:53319166-53319167	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs183147878	chr19:53319179-53319180	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs73067576	chr19:53319181-53319182	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs138813267	chr19:53319199-53319200	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs533375528	chr19:53319204-53319205	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs113447197	chr19:53319212-53319213	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs188334653	chr19:53319274-53319275	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs112147265	chr19:53319280-53319281	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs575995355	chr19:53319289-53319290	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs112317181	chr19:53319295-53319296	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs576091064	chr19:53319375-53319376	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs112129227	chr19:53319417-53319418	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs114415876	chr19:53319431-53319432	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs192623264	chr19:53319437-53319438	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs150854911	chr19:53319463-53319464	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs113817519	chr19:53319474-53319475	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs56232292	chr19:53319488-53319489	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs56292969	chr19:53319489-53319490	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs8108112	chr19:53319514-53319515	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs139323356	chr19:53319541-53319542	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs149291630	chr19:53319598-53319599	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs114425205	chr19:53319637-53319638	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs562249861	chr19:53319639-53319640	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs529555352	chr19:53319640-53319641	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs547692995	chr19:53319647-53319648	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs549288527	chr19:53319674-53319675	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs8108961	chr19:53319713-53319714	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs533093833	chr19:53319721-53319722	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs551491649	chr19:53319734-53319735	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs569714756	chr19:53319745-53319746	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs537047330	chr19:53319854-53319855	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs28703777	chr19:53319888-53319889	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs28450473	chr19:53319913-53319914	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs549923701	chr19:53319925-53319926	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs149804197	chr19:53319926-53319927	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs77331299	chr19:53319927-53319928	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs66490367	chr19:53319934-53319935	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs139758149	chr19:53319940-53319941	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs183622823	chr19:53319968-53319969	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs552921600	chr19:53319999-53320000	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs200495282	chr19:53320031-53320032	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs117645972	chr19:53320037-53320038	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs186480657	chr19:53320055-53320056	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs201576515	chr19:53320085-53320086	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs139092979	chr19:53320087-53320088	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Cancer	20164920	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Adrenocortical carcinoma	18281524	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
early-passage human iPS cells	21368824	CNVD

Chromatin state (count:1589 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53296200-53324000	Weak transcription	Fetal Brain Male	brain
2	chr19:53306000-53324000	Weak transcription	Colon Smooth Muscle	Colon
3	chr19:53306600-53324000	Weak transcription	Psoas Muscle	Psoas
4	chr19:53308000-53319600	Weak transcription	HUVEC	blood vessel
5	chr19:53308200-53319200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr19:53308200-53320200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr19:53308200-53324000	Weak transcription	Fetal Kidney	kidney
8	chr19:53311000-53323600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr19:53311200-53320200	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr19:53311400-53323600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
11	chr19:53311400-53324000	Weak transcription	NHDF-Ad	bronchial
12	chr19:53313400-53320800	Weak transcription	Brain Hippocampus Middle	brain
13	chr19:53313600-53324000	Weak transcription	Fetal Lung	lung
14	chr19:53313600-53324000	Weak transcription	Right Ventricle	heart
15	chr19:53313600-53324200	Weak transcription	Brain Substantia Nigra	brain
16	chr19:53313800-53320200	Weak transcription	Brain Inferior Temporal Lobe	brain
17	chr19:53313800-53320200	Weak transcription	Rectal Smooth Muscle	rectum
18	chr19:53313800-53321000	Weak transcription	NH-A	brain
19	chr19:53313800-53323600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
20	chr19:53313800-53323800	Weak transcription	Stomach Mucosa	stomach
21	chr19:53313800-53324000	Weak transcription	Brain Angular Gyrus	brain
22	chr19:53313800-53324000	Weak transcription	Brain Cingulate Gyrus	brain
23	chr19:53313800-53324000	Weak transcription	HSMM	muscle
24	chr19:53313800-53324000	Weak transcription	NHLF	lung
25	chr19:53313800-53324200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr19:53314000-53319200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
27	chr19:53314000-53319800	Weak transcription	HUES64 Cell Line	embryonic stem cell
28	chr19:53314000-53320000	Weak transcription	Placenta Amnion	Placenta Amnion
29	chr19:53314000-53320200	Weak transcription	H1 Cell Line	embryonic stem cell
30	chr19:53314000-53320200	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr19:53314000-53320200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
32	chr19:53314000-53320200	Weak transcription	Fetal Muscle Leg	muscle
33	chr19:53314000-53320200	Weak transcription	Fetal Thymus	thymus
34	chr19:53314000-53320200	Weak transcription	HMEC	breast
35	chr19:53314000-53320200	Weak transcription	HSMMtube	muscle
36	chr19:53314000-53320200	Weak transcription	NHEK	skin
37	chr19:53314000-53320400	Weak transcription	Brain Anterior Caudate	brain
38	chr19:53314000-53320800	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr19:53314000-53323600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
40	chr19:53314000-53323600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
41	chr19:53314000-53323600	Weak transcription	K562	blood
42	chr19:53314000-53323800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
43	chr19:53314000-53323800	Weak transcription	Brain Germinal Matrix	brain
44	chr19:53314000-53323800	Weak transcription	Skeletal Muscle Male	skeletal muscle
45	chr19:53314000-53323800	Weak transcription	Small Intestine	intestine
46	chr19:53314000-53324000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
47	chr19:53314000-53324000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
48	chr19:53314000-53324000	Weak transcription	Fetal Brain Female	brain
49	chr19:53314000-53324200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr19:53314000-53324200	Weak transcription	Aorta	Aorta

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links