Variant report

Variant	esv2760977
Chromosome Location	chr12:9575676-9734970
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1245)
CpG islands
(count:1343)
Chromatin interactive
region (count:6)
LncRNA
region (count:17)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1245 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr12:9621679-9621874	HepG2	liver:	n/a	n/a
2	ATF3	chr12:9608285-9608446	K562	blood:	n/a	n/a
3	BACH1	chr12:9600846-9601058	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr12:9601742-9601759	K562	blood:	n/a	n/a
5	BACH1	chr12:9600477-9600495	H1-hESC	embryonic stem cell:	n/a	n/a
6	BATF	chr12:9627071-9627414	GM12878	blood:	n/a	chr12:9627229-9627240
7	BATF	chr12:9623145-9623344	GM12878	blood:	n/a	n/a
8	BATF	chr12:9599060-9599517	GM12878	blood:	n/a	chr12:9599254-9599262
9	BATF	chr12:9599040-9599656	GM12878	blood:	n/a	chr12:9599254-9599262
10	BATF	chr12:9600026-9601051	GM12878	blood:	n/a	n/a
11	BATF	chr12:9627069-9627370	GM12878	blood:	n/a	chr12:9627229-9627240
12	BATF	chr12:9593967-9594189	GM12878	blood:	n/a	n/a
13	BATF	chr12:9594018-9594252	GM12878	blood:	n/a	n/a
14	BCL11A	chr12:9600168-9600488	GM12878	blood:	n/a	n/a
15	BCL11A	chr12:9598941-9599450	GM12878	blood:	n/a	chr12:9599009-9599018
16	BCL11A	chr12:9600546-9600932	GM12878	blood:	n/a	chr12:9600809-9600818 chr12:9600810-9600823
17	BCL11A	chr12:9599928-9600111	GM12878	blood:	n/a	n/a
18	BCL11A	chr12:9600454-9600822	GM12878	blood:	n/a	chr12:9600809-9600818
19	BCL11A	chr12:9599028-9599550	GM12878	blood:	n/a	n/a
20	BCL11A	chr12:9599859-9600445	GM12878	blood:	n/a	chr12:9600117-9600126
21	BHLHE40	chr12:9600844-9601336	K562	blood:	n/a	chr12:9600944-9600960
22	BHLHE40	chr12:9621680-9621866	K562	blood:	n/a	n/a
23	BHLHE40	chr12:9608196-9608405	K562	blood:	n/a	n/a
24	BRCA1	chr12:9600585-9600802	Hela-S3	cervix:	n/a	n/a
25	BRCA1	chr12:9621725-9621746	GM12878	blood:	n/a	n/a
26	CBX3	chr12:9602101-9602849	K562	blood:	n/a	n/a
27	CBX3	chr12:9599960-9601079	K562	blood:	n/a	n/a
28	CBX3	chr12:9602352-9602776	K562	blood:	n/a	n/a
29	CEBPB	chr12:9600111-9600908	GM12878	blood:	n/a	chr12:9600576-9600588
30	CEBPB	chr12:9699995-9700109	A549	lung:	n/a	n/a
31	CEBPB	chr12:9728216-9728457	A549	lung:	n/a	n/a
32	CEBPB	chr12:9699973-9700136	IMR90	lung:	n/a	n/a
33	CEBPB	chr12:9626941-9627031	K562	blood:	n/a	chr12:9626967-9626978
34	CEBPB	chr12:9600431-9601043	Hela-S3	cervix:	n/a	chr12:9600576-9600588
35	CEBPB	chr12:9626823-9627139	HepG2	liver:	n/a	chr12:9626967-9626978
36	CEBPB	chr12:9626831-9627127	Hela-S3	cervix:	n/a	chr12:9626967-9626978
37	CEBPB	chr12:9621719-9621810	K562	blood:	n/a	n/a
38	CEBPB	chr12:9621705-9621858	H1-hESC	embryonic stem cell:	n/a	n/a
39	CEBPB	chr12:9626864-9627128	K562	blood:	n/a	chr12:9626967-9626978
40	CEBPB	chr12:9621557-9621862	HepG2	liver:	n/a	n/a
41	CEBPB	chr12:9621651-9621793	HepG2	liver:	n/a	n/a
42	CEBPB	chr12:9635038-9635326	IMR90	lung:	n/a	chr12:9635144-9635153 chr12:9635144-9635153 chr12:9635144-9635153
43	CEBPB	chr12:9626847-9627088	A549	lung:	n/a	chr12:9626967-9626978
44	CEBPB	chr12:9646117-9646284	Hela-S3	cervix:	n/a	n/a
45	CEBPD	chr12:9600207-9600646	K562	blood:	n/a	n/a
46	CEBPD	chr12:9600756-9601125	K562	blood:	n/a	n/a
47	CHD2	chr12:9600600-9600659	H1-hESC	embryonic stem cell:	n/a	n/a
48	CHD2	chr12:9600478-9601040	GM12878	blood:	n/a	n/a
49	CHD2	chr12:9600363-9601066	Hela-S3	cervix:	n/a	n/a
50	CTCF	chr12:9665360-9665510	HEEpiC	esophagus:	n/a	n/a

(count:1343 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr12:9602245-9602295	HIPEpiC	eye:	n/a
2	chr12:9602245-9602295	HIPEpiC	eye:	n/a
3	chr12:9600884-9600934	GM12892	blood:	n/a
4	chr12:9600875-9600925	AoSMC	blood vessel:	n/a
5	chr12:9600941-9600991	MCF10A-Er-Src	breast:	n/a
6	chr12:9605181-9605231	HEK293	kidney:	embryo
7	chr12:9605181-9605231	GM19239	blood:	n/a
8	chr12:9720090-9720140	K562	blood:	n/a
9	chr12:9601031-9601081	T-47D	breast:	n/a
10	chr12:9600060-9600110	AG04450	lung:	fetal
11	chr12:9602245-9602295	PANC-1	pancreas:	n/a
12	chr12:9600884-9600934	MCF-7	breast:	n/a
13	chr12:9601149-9601199	PFSK-1	brain:	n/a
14	chr12:9720554-9720604	GM12891	blood:	n/a
15	chr12:9601031-9601081	PrEC	prostate:	n/a
16	chr12:9601066-9601116	U87	brain:	n/a
17	chr12:9720090-9720140	HCM	heart:	n/a
18	chr12:9601031-9601081	AG10803	skin:	n/a
19	chr12:9600453-9600503	NHDF-neo	bronchial:	n/a
20	chr12:9600886-9600936	GM12878	blood:	n/a
21	chr12:9600060-9600110	NHBE	bronchial:	n/a
22	chr12:9601149-9601199	AG04450	lung:	fetal
23	chr12:9600875-9600925	HCT-116	colon:	n/a
24	chr12:9597637-9597687	HRE	kidney:	n/a
25	chr12:9600060-9600110	BE2_C	brain:	n/a
26	chr12:9600888-9600938	AG04449	skin:	fetal
27	chr12:9600875-9600925	Hela-S3	cervix:	n/a
28	chr12:9600060-9600110	MCF-7	breast:	n/a
29	chr12:9720090-9720140	T-47D	breast:	n/a
30	chr12:9600941-9600991	BE2_C	brain:	n/a
31	chr12:9600941-9600991	LNCaP	prostate:	n/a
32	chr12:9600801-9600851	IMR90	lung:	fetal
33	chr12:9600875-9600925	H1-hESC	embryonic stem cell:	embryo
34	chr12:9600875-9600925	NHBE	bronchial:	n/a
35	chr12:9722091-9722141	AG10803	skin:	n/a
36	chr12:9605181-9605231	NB4	blood:	n/a
37	chr12:9720090-9720140	HCT-116	colon:	n/a
38	chr12:9600888-9600938	GM12891	blood:	n/a
39	chr12:9720090-9720140	NB4	blood:	n/a
40	chr12:9600950-9601000	AG09309	skin:	n/a
41	chr12:9600950-9601000	GM12878	blood:	n/a
42	chr12:9720554-9720604	SK-N-SH_RA	brain:	n/a
43	chr12:9600756-9600806	HMEC	breast:	n/a
44	chr12:9601161-9601211	SK-N-SH	brain:	n/a
45	chr12:9601161-9601211	AG04450	lung:	fetal
46	chr12:9601149-9601199	HRE	kidney:	n/a
47	chr12:9602245-9602295	HEK293	kidney:	embryo
48	chr12:9601066-9601116	LNCaP	prostate:	n/a
49	chr12:9720554-9720604	HNPCEpiC	eye:	n/a
50	chr12:9605181-9605231	BJ	skin:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr12:9620209..9621328-chr12:31206996..31207808,4	MCF-7	breast:
2	chr12:9436185..9436710-chr12:9599925..9600582,2	MCF-7	breast:
3	chr12:9530894..9532008-chr12:9621312..9622244,4	MCF-7	breast:
4	chr12:9436150..9437103-chr12:9600374..9601086,2	Hela-S3	cervix:
5	chr12:9436030..9436711-chr12:9600583..9601103,2	HCT-116	colon:
6	chr12:9620489..9621323-chr12:31206721..31207493,2	MCF-7	breast:

(count:17 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CLEC2D-2	chr12:9613920-9614245	XLOC_009653
2	lnc-CLEC2D-9	chr12:9724057-9724169	NONHSAT026830
3	lnc-CLEC2D-9	chr12:9723357-9723488	NONHSAT026830
4	lnc-KLRB1-3	chr12:9596155-9596205	NONHSAT026827
5	lnc-KLRB1-3	chr12:9596676-9596721	NONHSAT026827
6	lnc-KLRB1-3	chr12:9596229-9596278	NONHSAT026827
7	lnc-CLEC2D-9	chr12:9725599-9725666	NONHSAT026830
8	lnc-KLRB1-3	chr12:9600578-9600808	NONHSAT026827
9	lnc-CLEC2D-9	chr12:9725984-9726130	NONHSAT026830
10	lnc-KLRB1-2	chr12:9690763-9691239	l_603_chr12:9690762-9691933_testes
11	lnc-CLEC2D-2	chr12:9600944-9601474	FPKM1_group_5754_transcript_1
12	lnc-CLEC2D-2	chr12:9613919-9614245	FPKM1_group_5754_transcript_1
13	lnc-CLEC2D-9	chr12:9727443-9727545	NONHSAT026830
14	lnc-KLRB1-2	chr12:9691704-9691933	l_603_chr12:9690762-9691933_testes
15	lnc-CLEC2D-9	chr12:9728239-9728313	NONHSAT026830
16	lnc-CLEC2D-9	chr12:9728714-9728863	NONHSAT026830
17	lnc-CLEC2D-2	chr12:9600969-9601474	XLOC_009653

No data

Variant related genes	Relation type
ENSG00000212432	TF binding region
ENSG00000266633	TF binding region
DDX12P	TF binding region
ENSG00000256975	TF binding region
ENSG00000214776	TF binding region
ENSG00000212432	CpG island
ENSG00000266633	CpG island
DDX12P	CpG island
ENSG00000256975	CpG island
ENSG00000214776	CpG island
ENSG00000111788	chromatin interactions
CALU	miRNA target sites
CASP7	miRNA target sites

Extended variants
information (count: 3381 )
Associated
traits (count: 92 )

Variant overlapped rSNPs/rCNVs (count:3381 , 50 per page) page: 1 2 3 4 5 6 7 ... 68

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs535940674	chr12:9575684-9575685	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs552577206	chr12:9575716-9575717	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs144809945	chr12:9575717-9575718	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs566479008	chr12:9575747-9575748	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs182496555	chr12:9575810-9575811	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs187201301	chr12:9575908-9575909	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs190645668	chr12:9575914-9575915	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs538227652	chr12:9575938-9575939	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs182934229	chr12:9575940-9575941	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs188691418	chr12:9575941-9575942	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs199728370	chr12:9575973-9575974	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs575407404	chr12:9575984-9575985	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs111329574	chr12:9576009-9576010	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs142991541	chr12:9576011-9576012	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs577353368	chr12:9576016-9576017	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs9668664	chr12:9576033-9576034	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs375342361	chr12:9576035-9576036	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs56010045	chr12:9576036-9576037	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs185136603	chr12:9576068-9576069	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs544458455	chr12:9576102-9576103	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs371352597	chr12:9576113-9576114	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs554798824	chr12:9576120-9576121	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs115080767	chr12:9576168-9576169	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs187532294	chr12:9576172-9576173	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs375969346	chr12:9576180-9576181	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs375033311	chr12:9576185-9576186	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs7306121	chr12:9576186-9576187	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs540712509	chr12:9576207-9576208	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs192116401	chr12:9576254-9576255	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs10710981	chr12:9576281-9576282	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs4764254	chr12:9576324-9576325	Weak transcription Strong transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs4763442	chr12:9576325-9576326	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	mRNA abundance
33	rs183842051	chr12:9576364-9576365	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs7307300	chr12:9576389-9576390	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs188619755	chr12:9576425-9576426	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs374877035	chr12:9576490-9576491	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs148870798	chr12:9576535-9576536	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs142600707	chr12:9576633-9576634	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs369213827	chr12:9576647-9576648	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs180772034	chr12:9576649-9576650	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs144989502	chr12:9576683-9576684	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs202206491	chr12:9576735-9576736	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs184609117	chr12:9576736-9576737	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs59215376	chr12:9576737-9576738	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs182585090	chr12:9576765-9576766	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs376165112	chr12:9576833-9576834	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs61914669	chr12:9577013-9577014	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs3825308	chr12:9577027-9577028	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	mRNA abundance
49	rs369938321	chr12:9577046-9577047	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs115863102	chr12:9577051-9577052	Strong transcription Weak transcription ZNF genes & repeats Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:92)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Medulloblastoma	16968546	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Hepatocellular carcinoma	16750200	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Breast cancer	22032731	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	21965145	CNVD
Acute myeloid leukemia	16864856	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Disorders of sex development	21048976	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Prostate cancer	19156837	CNVD
Emphysema	19352772	CNVD
Medulloblastoma	21979893	CNVD
Basal cell lymphoma	17053054	CNVD
Malignant germ cell tumour	17285132	CNVD
Melanoma	18172304	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Wilms tumour	21544195	CNVD
Squamous cell cancer	21044232	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Breast cancer	21264507	CNVD
Cancer	16751803	CNVD
Testicular cancer	18059402	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Seminomas	18059402	CNVD
Esophageal cancer	21851588	CNVD
Lung cancer	20668451	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Testicular germ cell tumor	18059402	CNVD
Malaria	21533027	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Ewing''s sarcoma	17952124	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Breast cancer	21858162	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21785460	CNVD
Myelodysplastic syndrome	21251322	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Autism	22495311	CNVD
Cancer	20164919	CNVD
Epilepsy	21858020	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Myelofibrosis	22110671	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
craniofacial dysmorphism	21918468	CNVD
Malignant peripheral nerve sheath tumor	19844265	CNVD
Chronic lymphocytic leukemia	21049055	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Alzheimer''s disease	17160897	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21364760	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	21251322	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Breast cancer	21611746	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
early-passage human iPS cells	21368824	CNVD
Obesity	21131291	CNVD
small cell lung cancer	20016488	CNVD
Incontinentia Pigmenti	22033527	CNVD
Oligozoospermia	20877625	CNVD
Sertoli-cell only syndrome	20877625	CNVD
Cancer	21272361	CNVD
Schizophrenia	20967226	CNVD
Breast cancer	22522925	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:702 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:9544800-9593200	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr12:9559200-9599600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr12:9559600-9576600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr12:9559800-9577800	Weak transcription	A549	lung
5	chr12:9560000-9576400	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr12:9560000-9584000	Weak transcription	Right Ventricle	heart
7	chr12:9560000-9599800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
8	chr12:9560200-9599600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
9	chr12:9560400-9599600	Weak transcription	HUES64 Cell Line	embryonic stem cell
10	chr12:9560400-9599600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
11	chr12:9564200-9584600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr12:9564800-9578000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr12:9564800-9586000	Weak transcription	Fetal Lung	lung
14	chr12:9565000-9599800	Weak transcription	Esophagus	oesophagus
15	chr12:9566200-9577200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
16	chr12:9566800-9580600	Weak transcription	Primary T helper cells fromperipheralblood	blood
17	chr12:9566800-9580600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
18	chr12:9566800-9592600	Weak transcription	Pancreas	Pancrea
19	chr12:9567000-9587000	Weak transcription	Primary T cells from cord blood	blood
20	chr12:9567000-9599400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
21	chr12:9567000-9599400	Weak transcription	HepG2	liver
22	chr12:9567000-9599600	Weak transcription	Primary monocytes fromperipheralblood	blood
23	chr12:9567000-9599800	Weak transcription	Spleen	Spleen
24	chr12:9567200-9599800	Weak transcription	Primary neutrophils fromperipheralblood	blood
25	chr12:9569200-9592200	Weak transcription	Adipose Nuclei	Adipose
26	chr12:9569400-9576000	Weak transcription	Monocytes-CD14+_RO01746	blood
27	chr12:9569400-9599800	Weak transcription	Gastric	stomach
28	chr12:9570400-9591600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
29	chr12:9570600-9590200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr12:9571000-9599800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
31	chr12:9571200-9578400	Weak transcription	Fetal Intestine Large	intestine
32	chr12:9571600-9580000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
33	chr12:9572400-9577400	Strong transcription	Fetal Thymus	thymus
34	chr12:9572400-9600400	Weak transcription	Small Intestine	intestine
35	chr12:9572600-9599600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr12:9573000-9576400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
37	chr12:9573000-9576800	Weak transcription	Fetal Stomach	stomach
38	chr12:9573200-9593400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr12:9573400-9599200	Weak transcription	Hela-S3	cervix
40	chr12:9573600-9588000	Weak transcription	Primary T helper cells PMA-I stimulated	--
41	chr12:9573600-9599600	Weak transcription	Fetal Muscle Leg	muscle
42	chr12:9573800-9575800	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
43	chr12:9574000-9575800	Enhancers	Primary B cells from peripheral blood	blood
44	chr12:9574000-9580400	Strong transcription	HUES6 Cell Line	embryonic stem cell
45	chr12:9574200-9577000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
46	chr12:9574200-9581400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr12:9574200-9582600	Weak transcription	Fetal Intestine Small	intestine
48	chr12:9574200-9590600	Weak transcription	Thymus	Thymus
49	chr12:9574400-9576200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr12:9574400-9576600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links