Variant report

Variant	esv2761862
Chromosome Location	chr15:33284713-33312374
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:33287094-33287423	K562	blood:	n/a	n/a
2	BHLHE40	chr15:33297971-33297975	GM12878	blood:	n/a	n/a
3	CBX3	chr15:33305905-33306560	HCT-116	colon:	n/a	n/a
4	CEBPB	chr15:33305847-33306466	A549	lung:	n/a	chr15:33306088-33306101 chr15:33306088-33306101 chr15:33306088-33306099 chr15:33306088-33306099
5	CEBPB	chr15:33305842-33306330	MCF-7	breast:	n/a	chr15:33306088-33306101 chr15:33306088-33306101 chr15:33306088-33306099 chr15:33306088-33306099
6	CEBPB	chr15:33310514-33310809	HepG2	liver:	n/a	chr15:33310650-33310661
7	CEBPB	chr15:33310572-33310680	H1-hESC	embryonic stem cell:	n/a	chr15:33310650-33310661
8	CEBPB	chr15:33305934-33306376	A549	lung:	n/a	chr15:33306088-33306101 chr15:33306088-33306101 chr15:33306088-33306099 chr15:33306088-33306099
9	CEBPB	chr15:33305894-33306363	IMR90	lung:	n/a	chr15:33306088-33306101 chr15:33306088-33306101 chr15:33306088-33306099 chr15:33306088-33306099
10	CEBPB	chr15:33305939-33306336	Hela-S3	cervix:	n/a	chr15:33306088-33306101 chr15:33306088-33306101 chr15:33306088-33306099 chr15:33306088-33306099
11	CEBPB	chr15:33291617-33291899	IMR90	lung:	n/a	chr15:33291772-33291781 chr15:33291772-33291781 chr15:33291772-33291781 chr15:33291772-33291781 chr15:33291745-33291757 chr15:33291772-33291783 chr15:33291770-33291783
12	CEBPB	chr15:33310537-33310739	A549	lung:	n/a	chr15:33310650-33310661
13	CHD2	chr15:33297906-33298083	GM12878	blood:	n/a	n/a
14	CTCF	chr15:33299611-33299745	MCF-7	breast:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
15	CTCF	chr15:33287180-33287330	AG10803	skin:	n/a	chr15:33287221-33287242
16	CTCF	chr15:33299560-33299710	HCM	heart:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
17	CTCF	chr15:33287160-33287310	HCFaa	heart:	n/a	chr15:33287221-33287242
18	CTCF	chr15:33287160-33287310	BJ	skin:	n/a	chr15:33287221-33287242
19	CTCF	chr15:33287140-33287290	AG09309	skin:	n/a	chr15:33287221-33287242
20	CTCF	chr15:33285601-33285756	Spleen_OC	spleen:	n/a	n/a
21	CTCF	chr15:33287180-33287330	HCPEpiC	choroid plexus:	n/a	chr15:33287221-33287242
22	CTCF	chr15:33299620-33299770	HA-sp	spinal cord:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
23	CTCF	chr15:33287140-33287290	BJ	skin:	n/a	chr15:33287221-33287242
24	CTCF	chr15:33285580-33285730	BE2_C	brain:	n/a	n/a
25	CTCF	chr15:33287213-33287258	MCF-7	breast:	n/a	chr15:33287221-33287242
26	CTCF	chr15:33299507-33299769	LNCaP	prostate:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
27	CTCF	chr15:33287140-33287290	HCT-116	colon:	n/a	chr15:33287221-33287242
28	CTCF	chr15:33287140-33287333	Pancreas_OC	pancreas:	n/a	chr15:33287221-33287242
29	CTCF	chr15:33285600-33285750	Caco-2	colon:	n/a	n/a
30	CTCF	chr15:33287053-33287346	GM12878	blood:	n/a	chr15:33287221-33287242
31	CTCF	chr15:33287160-33287310	GM12878	blood:	n/a	chr15:33287221-33287242
32	CTCF	chr15:33285600-33285750	WERI-Rb-1	eye:	n/a	n/a
33	CTCF	chr15:33285560-33285710	HCM	heart:	n/a	n/a
34	CTCF	chr15:33299660-33299810	WI-38	lung:	n/a	n/a
35	CTCF	chr15:33287180-33287330	HPF	lung:	n/a	chr15:33287221-33287242
36	CTCF	chr15:33299592-33299745	GM12878	blood:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
37	CTCF	chr15:33287180-33287330	GM12874	blood:	n/a	chr15:33287221-33287242
38	CTCF	chr15:33285620-33285770	HUVEC	blood vessel:	n/a	n/a
39	CTCF	chr15:33299543-33299802	A549	lung:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
40	CTCF	chr15:33299620-33299770	HUVEC	blood vessel:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
41	CTCF	chr15:33299580-33299730	BE2_C	brain:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
42	CTCF	chr15:33299575-33299743	Medullo	brain:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
43	CTCF	chr15:33299600-33299750	HMEC	breast:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
44	CTCF	chr15:33299630-33299732	H1-hESC	embryonic stem cell:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
45	CTCF	chr15:33287120-33287270	HCM	heart:	n/a	chr15:33287221-33287242
46	CTCF	chr15:33287140-33287290	HBMEC	blood vessel:	n/a	chr15:33287221-33287242
47	CTCF	chr15:33299560-33299710	AG09309	skin:	n/a	chr15:33299644-33299665 chr15:33299647-33299655
48	CTCF	chr15:33287140-33287290	HRE	kidney:	n/a	chr15:33287221-33287242
49	CTCF	chr15:33287060-33287210	AG04450	lung:	n/a	n/a
50	CTCF	chr15:33287157-33287354	Lung_OC	lung:	n/a	chr15:33287221-33287242

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:33310931-33310981	HCM	heart:	n/a
2	chr15:33307322-33307372	GM19239	blood:	n/a
3	chr15:33300472-33300522	HCT-116	colon:	n/a
4	chr15:33311980-33312030	HMEC	breast:	n/a
5	chr15:33310931-33310981	HCM	heart:	n/a
6	chr15:33307322-33307372	GM19239	blood:	n/a
7	chr15:33300472-33300522	HCT-116	colon:	n/a
8	chr15:33311980-33312030	HMEC	breast:	n/a
9	chr15:33310931-33310981	HUVEC	blood vessel:	n/a
10	chr15:33311031-33311081	SKMC	muscle:	n/a
11	chr15:33307322-33307372	AG04450	lung:	fetal
12	chr15:33311906-33311956	HL-60	blood:	n/a
13	chr15:33310931-33310981	Caco-2	colon:	n/a
14	chr15:33311031-33311081	GM12878	blood:	n/a
15	chr15:33310931-33310981	HCF	heart:	n/a
16	chr15:33311738-33311788	BE2_C	brain:	n/a
17	chr15:33310931-33310981	NH-A	brain:	n/a
18	chr15:33311031-33311081	HCF	heart:	n/a
19	chr15:33300472-33300522	AG09319	gingival:	n/a
20	chr15:33300472-33300522	HEK293	kidney:	embryo
21	chr15:33311031-33311081	Hela-S3	cervix:	n/a
22	chr15:33311906-33311956	U87	brain:	n/a
23	chr15:33310931-33310981	U87	brain:	n/a
24	chr15:33311980-33312030	HCF	heart:	n/a
25	chr15:33311980-33312030	HL-60	blood:	n/a
26	chr15:33311906-33311956	GM06990	blood:	n/a
27	chr15:33311031-33311081	PFSK-1	brain:	n/a
28	chr15:33311906-33311956	RPTEC	kidney:	n/a
29	chr15:33310931-33310981	NHDF-neo	bronchial:	n/a
30	chr15:33311031-33311081	Jurkat	blood:	n/a
31	chr15:33311980-33312030	GM12891	blood:	n/a
32	chr15:33310931-33310981	ECC-1	luminal epithelium:	n/a
33	chr15:33311980-33312030	HepG2	liver:	n/a
34	chr15:33310931-33310981	HAEpiC	amniotic membrane:	n/a
35	chr15:33300472-33300522	HRCEpiC	kidney:	n/a
36	chr15:33310931-33310981	NT2-D1	testis:	n/a
37	chr15:33311980-33312030	Hepatocyte	liver:	n/a
38	chr15:33311738-33311788	HCPEpiC	choroid plexus:	n/a
39	chr15:33310931-33310981	SK-N-MC	brain:	n/a
40	chr15:33311906-33311956	AG04449	skin:	fetal
41	chr15:33311906-33311956	HAEpiC	amniotic membrane:	n/a
42	chr15:33307322-33307372	GM12891	blood:	n/a
43	chr15:33307322-33307372	MCF-7	breast:	n/a
44	chr15:33307322-33307372	K562	blood:	n/a
45	chr15:33300472-33300522	SK-N-SH_RA	brain:	n/a
46	chr15:33311980-33312030	NHDF-neo	bronchial:	n/a
47	chr15:33311980-33312030	PFSK-1	brain:	n/a
48	chr15:33300472-33300522	HepG2	liver:	n/a
49	chr15:33311738-33311788	T-47D	breast:	n/a
50	chr15:33300472-33300522	PrEC	prostate:	n/a

No.	Distal block	Cell Line	Cell type
1	chr15:32931325..32933308-chr15:33284072..33286426,2	K562	blood:
2	chr15:33299011..33299669-chr15:33424327..33425140,2	MCF-7	breast:
3	chr15:33312296..33313936-chr15:33357129..33359638,2	MCF-7	breast:
4	chr15:33287991..33290554-chr15:33293399..33295008,2	K562	blood:
5	chr15:33298305..33300128-chr15:33304629..33307307,2	MCF-7	breast:
6	chr15:33305189..33307511-chr15:33365399..33368264,2	MCF-7	breast:
7	chr15:32954026..32955488-chr15:33286759..33287801,5	K562	blood:
8	chr15:33287991..33290554-chr15:33293399..33295008,2	K562	blood:
9	chr15:33299875..33302830-chr15:33303027..33306565,4	MCF-7	breast:
10	chr15:33304810..33307499-chr15:33358975..33362023,4	MCF-7	breast:
11	chr15:33276577..33278445-chr15:33292733..33295082,2	MCF-7	breast:
12	chr15:33297830..33309224-chr15:33355310..33362883,25	MCF-7	breast:
13	chr15:33136011..33136698-chr15:33286980..33287655,2	K562	blood:
14	chr15:33300871..33303669-chr15:33360060..33362322,2	MCF-7	breast:
15	chr15:33298305..33300128-chr15:33304629..33307307,2	MCF-7	breast:
16	chr15:33298321..33300066-chr15:33361018..33362893,2	MCF-7	breast:
17	chr15:32954530..32955477-chr15:33288087..33289002,2	K562	blood:
18	chr15:32954901..32955435-chr15:33286799..33287653,2	MCF-7	breast:
19	chr15:33309677..33312273-chr15:33367650..33370378,2	MCF-7	breast:
20	chr15:33289408..33292508-chr15:33359912..33362781,5	MCF-7	breast:
21	chr15:32943540..32944373-chr15:33286720..33287432,3	MCF-7	breast:
22	chr15:33310761..33317010-chr15:33354777..33361874,13	MCF-7	breast:
23	chr15:32941628..32942202-chr15:33286760..33287625,2	MCF-7	breast:
24	chr15:33301497..33303169-chr15:33347240..33349716,2	MCF-7	breast:

Variant related genes	Relation type
HNRNPA1P71	TF binding region
HNRNPA1P71	CpG island
ENSG00000248905	chromatin interactions
ENSG00000259686	chromatin interactions

Extended variants
information (count: 1550 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:1550 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs144115228	chr15:33284718-33284719	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs552603369	chr15:33284742-33284743	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs571004848	chr15:33284744-33284745	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs367588805	chr15:33284748-33284749	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs28522303	chr15:33284749-33284750	Enhancers Weak transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
6	rs575475055	chr15:33284756-33284757	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs184263257	chr15:33284763-33284764	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs146450802	chr15:33284790-33284791	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs113343066	chr15:33284804-33284805	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs540736625	chr15:33284826-33284827	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs565427240	chr15:33284827-33284828	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs542249068	chr15:33284848-33284849	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs563824227	chr15:33284871-33284872	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs575562017	chr15:33284878-33284879	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs553622032	chr15:33284894-33284895	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs180905563	chr15:33284913-33284914	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs544854855	chr15:33284938-33284939	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs563077842	chr15:33284958-33284959	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs113340022	chr15:33285002-33285003	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs56284807	chr15:33285004-33285005	Enhancers Weak transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs545973605	chr15:33285009-33285010	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs564307385	chr15:33285026-33285027	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs186286855	chr15:33285028-33285029	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs139840966	chr15:33285038-33285039	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs546178488	chr15:33285040-33285041	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs189626826	chr15:33285083-33285084	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs149695379	chr15:33285093-33285094	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs556756125	chr15:33285095-33285096	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs565994708	chr15:33285135-33285136	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs536167749	chr15:33285159-33285160	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs112207815	chr15:33285166-33285167	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs573053188	chr15:33285171-33285172	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs145442741	chr15:33285233-33285234	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs529650592	chr15:33285251-33285252	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs200896237	chr15:33285261-33285262	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs548193945	chr15:33285322-33285323	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs150185564	chr15:33285333-33285334	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs368387656	chr15:33285349-33285350	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs163835	chr15:33285405-33285406	Enhancers Weak transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs181694592	chr15:33285406-33285407	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs552520593	chr15:33285433-33285434	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs148830084	chr15:33285444-33285445	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs530265932	chr15:33285464-33285465	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs570613475	chr15:33285481-33285482	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs112201544	chr15:33285506-33285507	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs537809148	chr15:33285515-33285516	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs534824478	chr15:33285530-33285531	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs143807594	chr15:33285536-33285537	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs187109641	chr15:33285575-33285576	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs191089476	chr15:33285605-33285606	Enhancers Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Melanoma	18172304	CNVD
Autism	17322880	CNVD
Prader-willi syndrome	19329560	CNVD
Autism	17999366	CNVD
Autism	17901113	CNVD
Neurodevelopmental disorder	17015230	CNVD
Autism	18414403	CNVD
Neurocytoma	17123091	CNVD
Mental retardation	18923513	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Abnormal corpus callosum	21572526	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Autism	19521722	CNVD
Bipolar disorder	19114987	CNVD
Epilepsy	19521722	CNVD
Mental retardation	19521722	CNVD
Schizophrenia	19521646	CNVD
Autism	19050728	CNVD
Schizophrenia	19348701	CNVD
Schizophrenia	18668039	CNVD
Schizophrenia	18990708	CNVD
Schizophrenia	19571808	CNVD
Velocardiofacial syndrome	19329560	CNVD
Schizophrenia	19443537	CNVD
Epilepsy	20923578	CNVD
Autism	19955444	CNVD
Autism	20964600	CNVD
Schizophrenia	19955444	CNVD
Olfactory neuroblastoma	18408657	CNVD
Legius syndrome	19443465	CNVD
Holoprosencephaly	21359414	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:377 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:33267400-33285200	Weak transcription	HSMM	muscle
2	chr15:33273200-33294000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
3	chr15:33278400-33286400	Weak transcription	Fetal Stomach	stomach
4	chr15:33280200-33285200	Weak transcription	NHLF	lung
5	chr15:33280400-33285800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr15:33280600-33285200	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr15:33281400-33285800	Weak transcription	HSMMtube	muscle
8	chr15:33282400-33285800	Weak transcription	Osteobl	bone
9	chr15:33282800-33285800	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
10	chr15:33283200-33285600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr15:33283600-33286200	Weak transcription	Rectal Smooth Muscle	rectum
12	chr15:33283800-33286600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr15:33284000-33285200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr15:33284000-33285800	Weak transcription	Duodenum Smooth Muscle	Duodenum
15	chr15:33284200-33285800	Weak transcription	Fetal Kidney	kidney
16	chr15:33284400-33284800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr15:33284800-33286400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
18	chr15:33285000-33285200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr15:33285200-33285400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr15:33285200-33285400	Enhancers	NHDF-Ad	bronchial
21	chr15:33285200-33286000	Enhancers	Pancreatic Islets	Pancreatic Islet
22	chr15:33285200-33286600	Enhancers	HSMM	muscle
23	chr15:33285200-33287200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
24	chr15:33285200-33287200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr15:33285200-33287200	Enhancers	NHLF	lung
26	chr15:33285400-33286000	Enhancers	HUES48 Cell Line	embryonic stem cell
27	chr15:33285400-33286000	Enhancers	iPS-18 Cell Line	embryonic stem cell
28	chr15:33285400-33286000	Enhancers	A549	lung
29	chr15:33285400-33286200	Enhancers	iPS-15b Cell Line	embryonic stem cell
30	chr15:33285400-33286600	Weak transcription	NHDF-Ad	bronchial
31	chr15:33285600-33286000	Enhancers	iPS-20b Cell Line	embryonic stem cell
32	chr15:33285600-33286200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
33	chr15:33285600-33286800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
34	chr15:33285600-33286800	Enhancers	HUES6 Cell Line	embryonic stem cell
35	chr15:33285600-33287200	Enhancers	Muscle Satellite Cultured Cells	--
36	chr15:33285800-33286000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr15:33285800-33286000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
38	chr15:33285800-33286000	Enhancers	Duodenum Smooth Muscle	Duodenum
39	chr15:33285800-33286000	Enhancers	Fetal Kidney	kidney
40	chr15:33285800-33286000	Enhancers	HSMMtube	muscle
41	chr15:33285800-33286200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
42	chr15:33285800-33286600	Enhancers	ES-I3 Cell Line	embryonic stem cell
43	chr15:33285800-33287200	Enhancers	Osteobl	bone
44	chr15:33285800-33288000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr15:33286000-33286200	Weak transcription	HSMMtube	muscle
46	chr15:33286000-33286400	Weak transcription	Duodenum Smooth Muscle	Duodenum
47	chr15:33286000-33286400	Weak transcription	A549	lung
48	chr15:33286000-33286600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
49	chr15:33286000-33290000	Weak transcription	Pancreatic Islets	Pancreatic Islet
50	chr15:33286000-33294000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links