Variant report

Variant	esv2762904
Chromosome Location	chr11:32969258-33586535
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:8208)
CpG islands
(count:6963)
Chromatin interactive
region (count:480)
LncRNA
region (count:26)
Mature miRNA
region (count: 0)
miRNA target
sites (count:16)

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No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:33467294-33467606	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:33277822-33278022	HepG2	liver:	n/a	n/a
3	ARID3A	chr11:33342559-33342940	K562	blood:	n/a	n/a
4	ARID3A	chr11:33204058-33204223	HepG2	liver:	n/a	n/a
5	ARID3A	chr11:33383912-33384198	K562	blood:	n/a	n/a
6	ARID3A	chr11:33037131-33037894	HepG2	liver:	n/a	n/a
7	ARID3A	chr11:33040233-33040432	HepG2	liver:	n/a	n/a
8	ARID3A	chr11:33187666-33188187	K562	blood:	n/a	chr11:33188154-33188170
9	ARID3A	chr11:33181198-33181511	K562	blood:	n/a	n/a
10	ARID3A	chr11:33288039-33288460	HepG2	liver:	n/a	n/a
11	ARID3A	chr11:33280804-33281150	K562	blood:	n/a	n/a
12	ARID3A	chr11:33182607-33183285	HepG2	liver:	n/a	n/a
13	ARID3A	chr11:33351286-33351649	K562	blood:	n/a	n/a
14	ARID3A	chr11:33182051-33183545	K562	blood:	n/a	n/a
15	ARID3A	chr11:33278760-33279150	HepG2	liver:	n/a	n/a
16	ARID3A	chr11:33499524-33499864	HepG2	liver:	n/a	n/a
17	ARID3A	chr11:32975953-32975956	K562	blood:	n/a	n/a
18	ARID3A	chr11:33087228-33087452	HepG2	liver:	n/a	n/a
19	ARID3A	chr11:33394101-33394301	HepG2	liver:	n/a	n/a
20	ARID3A	chr11:33039311-33039873	HepG2	liver:	n/a	n/a
21	ARID3A	chr11:33233161-33233450	HepG2	liver:	n/a	n/a
22	ARID3A	chr11:33187786-33188158	HepG2	liver:	n/a	n/a
23	ARID3A	chr11:33280061-33280282	K562	blood:	n/a	n/a
24	ARID3A	chr11:33383925-33384254	HepG2	liver:	n/a	n/a
25	ARID3A	chr11:33201178-33201210	K562	blood:	n/a	n/a
26	ARID3A	chr11:33279537-33280483	HepG2	liver:	n/a	n/a
27	ARID3A	chr11:33193183-33193188	K562	blood:	n/a	n/a
28	ARID3A	chr11:33351288-33351628	HepG2	liver:	n/a	n/a
29	ARID3A	chr11:33529658-33529797	K562	blood:	n/a	n/a
30	ARID3A	chr11:33082889-33083186	HepG2	liver:	n/a	n/a
31	ARID3A	chr11:33364523-33364723	K562	blood:	n/a	n/a
32	ARID3A	chr11:33280884-33281018	HepG2	liver:	n/a	n/a
33	ARID3A	chr11:33288174-33288395	K562	blood:	n/a	n/a
34	ARID3A	chr11:33056563-33056800	HepG2	liver:	n/a	n/a
35	ARID3A	chr11:33060598-33061311	HepG2	liver:	n/a	n/a
36	ARID3A	chr11:33169179-33169315	K562	blood:	n/a	n/a
37	ARID3A	chr11:33229217-33229421	K562	blood:	n/a	n/a
38	ARID3A	chr11:33040791-33040796	HepG2	liver:	n/a	n/a
39	ATF1	chr11:33182918-33183497	K562	blood:	n/a	n/a
40	ATF1	chr11:33341606-33341888	K562	blood:	n/a	n/a
41	ATF1	chr11:33249480-33249846	K562	blood:	n/a	n/a
42	ATF1	chr11:33275258-33275288	K562	blood:	n/a	n/a
43	ATF1	chr11:33046458-33046503	K562	blood:	n/a	n/a
44	ATF1	chr11:33190481-33190793	K562	blood:	n/a	n/a
45	ATF1	chr11:33181115-33181435	K562	blood:	n/a	n/a
46	ATF1	chr11:33351332-33351614	K562	blood:	n/a	n/a
47	ATF1	chr11:33329665-33330069	K562	blood:	n/a	n/a
48	ATF1	chr11:33061781-33062183	K562	blood:	n/a	n/a
49	ATF1	chr11:33394198-33394335	K562	blood:	n/a	n/a
50	ATF1	chr11:33342458-33342912	K562	blood:	n/a	n/a

(count:6963 , 50 per page) page: 1 2 3 4 5 6 7 ... 140

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:33163286-33163336	T-47D	breast:	n/a
2	chr11:33049259-33049309	AG10803	skin:	n/a
3	chr11:33474484-33474534	NHDF-neo	bronchial:	n/a
4	chr11:33264842-33264892	SK-N-SH	brain:	n/a
5	chr11:33156837-33156887	SK-N-SH_RA	brain:	n/a
6	chr11:33060711-33060761	NH-A	brain:	n/a
7	chr11:33036574-33036624	CMK	blood:	n/a
8	chr11:33060549-33060599	BJ	skin:	n/a
9	chr11:33061540-33061590	HAEpiC	amniotic membrane:	n/a
10	chr11:33163286-33163336	T-47D	breast:	n/a
11	chr11:33049259-33049309	AG10803	skin:	n/a
12	chr11:33474484-33474534	NHDF-neo	bronchial:	n/a
13	chr11:33264842-33264892	SK-N-SH	brain:	n/a
14	chr11:33156837-33156887	SK-N-SH_RA	brain:	n/a
15	chr11:33060711-33060761	NH-A	brain:	n/a
16	chr11:33036574-33036624	CMK	blood:	n/a
17	chr11:33060549-33060599	BJ	skin:	n/a
18	chr11:33061540-33061590	HAEpiC	amniotic membrane:	n/a
19	chr11:33061079-33061129	Hela-S3	cervix:	n/a
20	chr11:33097335-33097385	BE2_C	brain:	n/a
21	chr11:33037542-33037592	RPTEC	kidney:	n/a
22	chr11:33061845-33061895	GM12891	blood:	n/a
23	chr11:33278186-33278236	Caco-2	colon:	n/a
24	chr11:33036574-33036624	PANC-1	pancreas:	n/a
25	chr11:33217195-33217245	LNCaP	prostate:	n/a
26	chr11:33037624-33037674	AG04449	skin:	fetal
27	chr11:33280348-33280398	HUVEC	blood vessel:	n/a
28	chr11:33396983-33397033	HRCEpiC	kidney:	n/a
29	chr11:33183213-33183263	HEEpiC	esophagus:	n/a
30	chr11:33183001-33183051	AG09309	skin:	n/a
31	chr11:33083021-33083071	BJ	skin:	n/a
32	chr11:33183151-33183201	K562	blood:	n/a
33	chr11:33061716-33061766	PFSK-1	brain:	n/a
34	chr11:33563720-33563770	PrEC	prostate:	n/a
35	chr11:33279091-33279141	AG04449	skin:	fetal
36	chr11:33563720-33563770	MCF10A-Er-Src	breast:	n/a
37	chr11:33394273-33394323	ovcar-3	ovarian:	n/a
38	chr11:33317039-33317089	NHDF-neo	bronchial:	n/a
39	chr11:33037792-33037842	HRCEpiC	kidney:	n/a
40	chr11:33183263-33183313	HCF	heart:	n/a
41	chr11:33040743-33040793	AoSMC	blood vessel:	n/a
42	chr11:33061388-33061438	H1-hESC	embryonic stem cell:	embryo
43	chr11:33060800-33060850	HUVEC	blood vessel:	n/a
44	chr11:33183108-33183158	NT2-D1	testis:	n/a
45	chr11:33112779-33112829	SKMC	muscle:	n/a
46	chr11:33217195-33217245	AoSMC	blood vessel:	n/a
47	chr11:33182787-33182837	HEK293	kidney:	embryo
48	chr11:33375412-33375462	CMK	blood:	n/a
49	chr11:33081126-33081176	HCF	heart:	n/a
50	chr11:33058248-33058298	NHBE	bronchial:	n/a

(count:480 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Distal block	Cell Line	Cell type
1	chr11:33180325..33183648-chr11:33198463..33201450,3	K562	blood:
2	chr11:33187260..33188477-chr11:33350825..33351973,13	MCF-7	breast:
3	chr11:33278726..33280450-chr11:33281351..33283602,2	MCF-7	breast:
4	chr11:33433824..33436288-chr11:33439074..33441301,2	K562	blood:
5	chr11:33134443..33136526-chr11:33141059..33143030,2	K562	blood:
6	chr11:33429478..33432664-chr11:33434233..33436615,3	K562	blood:
7	chr11:33426996..33428983-chr11:33431666..33434178,3	K562	blood:
8	chr11:33142839..33144510-chr11:33145083..33148009,2	MCF-7	breast:
9	chr11:33180427..33182793-chr11:33208448..33210251,2	K562	blood:
10	chr11:33187604..33188364-chr11:33351039..33351579,2	MCF-7	breast:
11	chr11:33035321..33039472-chr11:33059106..33064085,11	K562	blood:
12	chr11:33283955..33286219-chr11:33326919..33329577,2	K562	blood:
13	chr11:33004103..33008077-chr11:33008139..33011033,3	MCF-7	breast:
14	chr11:33319935..33321547-chr11:33324870..33327830,2	K562	blood:
15	chr11:33187528..33188393-chr11:33341292..33341979,2	K562	blood:
16	chr11:33124274..33125831-chr11:33126964..33128928,2	K562	blood:
17	chr11:33107195..33109428-chr11:33181962..33183514,2	K562	blood:
18	chr11:33151982..33154507-chr11:33378792..33381624,2	K562	blood:
19	chr11:33133887..33136865-chr11:33162527..33165170,2	K562	blood:
20	chr11:33049785..33058354-chr11:33058756..33063053,11	K562	blood:
21	chr11:33179702..33184517-chr11:33195244..33197340,4	K562	blood:
22	chr11:33183085..33184714-chr11:33357286..33359018,2	K562	blood:
23	chr11:33530740..33532522-chr11:33535502..33537304,2	MCF-7	breast:
24	chr11:33161983..33167383-chr11:33177368..33180644,5	K562	blood:
25	chr11:32914066..32915835-chr11:33278115..33280779,2	K562	blood:
26	chr11:33432981..33435559-chr11:33436354..33439310,2	K562	blood:
27	chr11:33146192..33148602-chr11:33177101..33179018,2	K562	blood:
28	chr11:33279061..33281281-chr11:34073248..34075291,2	K562	blood:
29	chr11:33278126..33279710-chr11:33347501..33349004,2	MCF-7	breast:
30	chr11:33278606..33279290-chr11:33341646..33342645,2	MCF-7	breast:
31	chr11:33180160..33185398-chr11:33277230..33283289,14	K562	blood:
32	chr11:33278516..33280068-chr11:33740390..33742827,2	MCF-7	breast:
33	chr11:33303628..33306131-chr11:33323858..33326842,2	MCF-7	breast:
34	chr11:33063482..33065628-chr11:33072339..33074325,2	K562	blood:
35	chr11:33124155..33125831-chr11:33126964..33129155,2	K562	blood:
36	chr11:33182184..33185099-chr11:33348035..33349582,2	MCF-7	breast:
37	chr11:33187604..33188364-chr11:33351039..33351579,2	MCF-7	breast:
38	chr11:33059557..33062519-chr11:33089882..33091963,2	MCF-7	breast:
39	chr11:33278564..33280833-chr11:33295728..33298096,2	K562	blood:
40	chr11:33170542..33173595-chr11:33181570..33184778,4	MCF-7	breast:
41	chr11:33182577..33183118-chr15:64387933..64388627,2	Hela-S3	cervix:
42	chr11:33181969..33182826-chr17:48745137..48745930,2	Hela-S3	cervix:
43	chr11:33241181..33243191-chr11:33245641..33247862,2	MCF-7	breast:
44	chr11:33372537..33375934-chr11:33378619..33381344,3	MCF-7	breast:
45	chr11:33313913..33316207-chr11:33316446..33318411,2	MCF-7	breast:
46	chr11:33565766..33566276-chr11:33851021..33851593,2	K562	blood:
47	chr11:33059557..33062519-chr11:33089882..33091963,2	MCF-7	breast:
48	chr11:33278310..33280237-chr11:33303017..33305023,2	MCF-7	breast:
49	chr11:33404576..33406306-chr11:33408202..33410856,2	MCF-7	breast:
50	chr11:32996304..32999169-chr11:33001880..33003438,2	MCF-7	breast:

(count:26 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TCP11L1-1	chr11:33211479-33213144	ENSG00000247151
2	lnc-HIPK3-2	chr11:33424762-33425151	NONHSAT018700
3	lnc-CSTF3-1	chr11:33036823-33036899	NONHSAT018681
4	lnc-CSTF3-1	chr11:33025345-33025436	NONHSAT018681
5	lnc-TCP11L1-1	chr11:33210914-33211103	ENSG00000247151
6	lnc-CSTF3-1	chr11:32977870-32978000	NONHSAT018681
7	lnc-DEPDC7-2	chr11:33097696-33101000	NONHSAT018688
8	lnc-TCP11L1-1	chr11:33211479-33211840	ENSG00000247151
9	lnc-TCP11L1-4	chr11:33334713-33335041	expReg_chr11_2985_+
10	lnc-CSTF3-5	chr11:33222131-33222464	NONHSAT018696
11	lnc-TCP11L1-1	chr11:33183203-33183327	NONHSAT018691
12	lnc-CSTF3-3	chr11:33211608-33212049	NONHSAT018693
13	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151
14	lnc-TCP11L1-1	chr11:33210316-33210396	NONHSAT018691
15	lnc-CCDC73-5	chr11:33116283-33116906	expReg_chr11_2930_-
16	lnc-CSTF3-2	chr11:33097112-33098006	NONHSAT018687
17	lnc-CSTF3-4	chr11:33212346-33212446	NONHSAT018694
18	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151
19	lnc-TCP11L1-1	chr11:33210914-33211103	NONHSAT018691
20	lnc-CSTF3-4	chr11:33212459-33213144	NONHSAT018694
21	lnc-TCP11L1-1	chr11:33211479-33213142	NONHSAT018691
22	lnc-TCP11L1-1	chr11:33183203-33183327	ENSG00000247151
23	lnc-CSTF3-1	chr11:32978271-32978312	NONHSAT018681
24	lnc-C11orf41-5	chr11:33472192-33472489	NONHSAT018701
25	lnc-TCP11L1-1	chr11:33183234-33183327	ENSG00000247151
26	lnc-TCP11L1-3	chr11:33333205-33333598	expReg_chr11_2971_+

No data

(count:16 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	HIPK3	hsa-miR-106a-5p	chr11:33375709-33375730
2	HIPK3	hsa-miR-20b-5p	chr11:33375245-33375267
3	CSTF3	hsa-miR-124-3p	chr11:33106507-33106525
4	HIPK3	hsa-miR-19b-3p	chr11:33358682-33358704
5	HIPK3	hsa-miR-19b-3p	chr11:33375275-33375282
6	HIPK3	hsa-miR-124-3p	chr11:33375651-33375670
7	HIPK3	hsa-miR-92a-3p	chr11:33375214-33375235
8	HIPK3	hsa-miR-92a-3p	chr11:33375228-33375234
9	HIPK3	hsa-miR-124-3p	chr11:33375663-33375670
10	HIPK3	hsa-miR-92a-3p	chr11:33375388-33375409
11	HIPK3	hsa-miR-19b-3p	chr11:33375260-33375282
12	HIPK3	hsa-miR-124-3p	chr11:33375376-33375395
13	HIPK3	hsa-miR-335-5p	chr11:33375589-33375614
14	HIPK3	hsa-miR-106a-5p	chr11:33375245-33375267
15	CSTF3	hsa-miR-124-3p	chr11:33106222-33106241
16	HIPK3	hsa-miR-20b-5p	chr11:33375709-33375730

Variant related genes	Relation type
ENSG00000200485	TF binding region
ENSG00000206808	TF binding region
TCP11L1	TF binding region
HIPK3	TF binding region
DEPDC7	TF binding region
RPL29P23	TF binding region
CSTF3	TF binding region
ENSG00000241255	TF binding region
PIGCP1	TF binding region
QSER1	TF binding region
CSTF3-AS1	TF binding region
ENSG00000255207	TF binding region
KIAA1549L	TF binding region
ENSG00000254537	TF binding region
ENSG00000200615	TF binding region
ENSG00000223134	TF binding region
ENSG00000200485	CpG island
ENSG00000206808	CpG island
TCP11L1	CpG island
HIPK3	CpG island
DEPDC7	CpG island
RPL29P23	CpG island
CSTF3	CpG island
ENSG00000241255	CpG island
PIGCP1	CpG island
QSER1	CpG island
CSTF3-AS1	CpG island
ENSG00000255207	CpG island
KIAA1549L	CpG island
ENSG00000254537	CpG island
ENSG00000200615	CpG island
ENSG00000223134	CpG island
ENSG00000115904	chromatin interactions
ENSG00000255207	chromatin interactions
ENSG00000247151	chromatin interactions
ENSG00000175634	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000102786	chromatin interactions
ENSG00000085063	chromatin interactions
ENSG00000176148	chromatin interactions
ENSG00000254718	chromatin interactions
ENSG00000176102	chromatin interactions
ENSG00000060749	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000196331	chromatin interactions
ENSG00000202198	chromatin interactions
ENSG00000248487	chromatin interactions
ENSG00000079805	chromatin interactions
ENSG00000177542	chromatin interactions
ENSG00000135387	chromatin interactions
ENSG00000231770	chromatin interactions
ENSG00000132570	chromatin interactions
ENSG00000128595	chromatin interactions
ENSG00000119314	chromatin interactions
ENSG00000200485	chromatin interactions
ENSG00000135378	chromatin interactions
ENSG00000254537	chromatin interactions
ENSG00000107745	chromatin interactions
ENSG00000121690	chromatin interactions
ENSG00000117335	chromatin interactions
ENSG00000260924	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000200615	chromatin interactions
ENSG00000028528	chromatin interactions
ENSG00000111669	chromatin interactions
ENSG00000272762	chromatin interactions
ENSG00000271380	chromatin interactions
ENSG00000108846	chromatin interactions
ENSG00000236778	chromatin interactions
ENSG00000141522	chromatin interactions
ENSG00000170899	chromatin interactions
ENSG00000182718	chromatin interactions
ENSG00000130066	chromatin interactions
ENSG00000206573	chromatin interactions
ENSG00000086200	chromatin interactions
ENSG00000207972	chromatin interactions
ENSG00000067225	chromatin interactions
ENSG00000086189	chromatin interactions
ENSG00000171161	chromatin interactions
ENSG00000206808	chromatin interactions
ENSG00000110422	chromatin interactions
ENSG00000263004	chromatin interactions
ENSG00000114779	chromatin interactions
ENSG00000223134	chromatin interactions
ENSG00000213713	chromatin interactions
ENSG00000105479	chromatin interactions
ENSG00000163348	chromatin interactions
ENSG00000137309	chromatin interactions
MICALL1	miRNA target sites
YWHAZ	miRNA target sites
ARID2	miRNA target sites
PSME3	miRNA target sites
NUP160	miRNA target sites
ERI2	miRNA target sites

Extended variants
information (count: 21715 )
Associated
traits (count: 91 )

Variant overlapped rSNPs/rCNVs (count:21715 , 50 per page) page: 1 2 3 4 5 6 7 ... 435

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs34479183	chr11:32969267-32969268	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs555455961	chr11:32969294-32969295	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs574324879	chr11:32969375-32969376	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs188212901	chr11:32969435-32969436	Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs180964741	chr11:32969467-32969468	Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs118037718	chr11:32969513-32969514	Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs542136055	chr11:32969514-32969515	Weak transcription Strong transcription ZNF genes & repeats Enhancers Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs185560125	chr11:32969618-32969619	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs578229171	chr11:32969630-32969631	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs545582705	chr11:32969638-32969639	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs190413948	chr11:32969728-32969729	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs544591366	chr11:32969809-32969810	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs564621612	chr11:32969873-32969874	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs16923664	chr11:32969884-32969885	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs181603071	chr11:32969900-32969901	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs560520770	chr11:32969937-32969938	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs377075075	chr11:32969980-32969981	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs149355796	chr11:32969987-32969988	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs143690761	chr11:32970006-32970007	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs541115479	chr11:32970015-32970016	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs11032066	chr11:32970052-32970053	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs142881017	chr11:32970055-32970056	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs146122094	chr11:32970090-32970091	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs186736521	chr11:32970114-32970115	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs113586829	chr11:32970124-32970125	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs553173564	chr11:32970136-32970137	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs117843844	chr11:32970142-32970143	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs6484614	chr11:32970199-32970200	Weak transcription Strong transcription ZNF genes & repeats Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs190651032	chr11:32970257-32970258	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs181137474	chr11:32970288-32970289	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs544628197	chr11:32970289-32970290	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs564277686	chr11:32970299-32970300	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs578085844	chr11:32970310-32970311	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs540364549	chr11:32970467-32970468	Weak transcription Strong transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs560773631	chr11:32970624-32970625	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs529427129	chr11:32970650-32970651	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs542776531	chr11:32970781-32970782	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs559168529	chr11:32970840-32970841	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs562850039	chr11:32970875-32970876	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs78327710	chr11:32970948-32970949	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs550595235	chr11:32970962-32970963	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs1337757	chr11:32971013-32971014	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
43	rs114650863	chr11:32971068-32971069	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs116701930	chr11:32971082-32971083	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs142201504	chr11:32971085-32971086	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs368043210	chr11:32971158-32971159	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs4756385	chr11:32971173-32971174	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs34470528	chr11:32971214-32971215	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs185578002	chr11:32971216-32971217	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs189602766	chr11:32971235-32971236	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:91)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	22286061	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Ependymoma	20639864	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD

Chromatin state (count:12040 , 50 per page) page: 1 2 3 4 5 6 7 ... 241

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:32950400-32994400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
2	chr11:32953800-32978400	Weak transcription	Fetal Intestine Small	intestine
3	chr11:32954600-32971400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr11:32954600-32990200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr11:32955400-32994200	Weak transcription	Gastric	stomach
6	chr11:32955400-32994400	Weak transcription	Esophagus	oesophagus
7	chr11:32955600-32987200	Weak transcription	Right Ventricle	heart
8	chr11:32955600-33000800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
9	chr11:32955600-33003800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr11:32956000-32975400	Weak transcription	Primary T helper cells PMA-I stimulated	--
11	chr11:32956200-32979400	Weak transcription	Colon Smooth Muscle	Colon
12	chr11:32956200-32994200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr11:32956800-32975400	Weak transcription	Lung	lung
14	chr11:32956800-32975400	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr11:32956800-32975400	Weak transcription	NHEK	skin
16	chr11:32956800-32977800	Weak transcription	Left Ventricle	heart
17	chr11:32956800-32977800	Weak transcription	Thymus	Thymus
18	chr11:32956800-32994200	Weak transcription	Skeletal Muscle Male	skeletal muscle
19	chr11:32957000-32969400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr11:32957000-32978400	Weak transcription	Duodenum Mucosa	Duodenum
21	chr11:32957000-32978400	Weak transcription	Stomach Smooth Muscle	stomach
22	chr11:32957200-32969400	Weak transcription	Primary B cells from peripheral blood	blood
23	chr11:32957200-32978800	Weak transcription	Skeletal Muscle Female	skeletal muscle
24	chr11:32957200-32979200	Weak transcription	Rectal Mucosa Donor 31	rectum
25	chr11:32957400-32975400	Weak transcription	Fetal Brain Male	brain
26	chr11:32957400-32975400	Weak transcription	HMEC	breast
27	chr11:32957400-32976400	Weak transcription	NHDF-Ad	bronchial
28	chr11:32957600-32978400	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
29	chr11:32958000-32979600	Weak transcription	Fetal Kidney	kidney
30	chr11:32958400-32975400	Weak transcription	Muscle Satellite Cultured Cells	--
31	chr11:32958600-32969400	Weak transcription	Fetal Intestine Large	intestine
32	chr11:32958600-32969600	Weak transcription	HSMM	muscle
33	chr11:32958600-32969600	Weak transcription	HUVEC	blood vessel
34	chr11:32958600-32975200	Weak transcription	A549	lung
35	chr11:32958600-32980600	Weak transcription	Brain Cingulate Gyrus	brain
36	chr11:32958800-32977800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
37	chr11:32958800-32978600	Weak transcription	NH-A	brain
38	chr11:32959200-32977800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
39	chr11:32959200-32977800	Weak transcription	Fetal Muscle Leg	muscle
40	chr11:32959200-32978000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr11:32959400-32969400	Weak transcription	Fetal Lung	lung
42	chr11:32959400-32969600	Weak transcription	Fetal Thymus	thymus
43	chr11:32959400-32975400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr11:32959600-32978400	Weak transcription	Brain Germinal Matrix	brain
45	chr11:32959800-32969400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
46	chr11:32960000-32969600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
47	chr11:32960000-32974600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
48	chr11:32960000-32975400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
49	chr11:32960200-32969600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
50	chr11:32960200-32969600	Weak transcription	Cortex derived primary cultured neurospheres	brain

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