Variant report

Variant	esv2762999
Chromosome Location	chr19:53665818-53709353
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:821)
CpG islands
(count:1098)
Chromatin interactive
region (count:13)
LncRNA
region (count:18)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:821 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr19:53676238-53676490	K562	blood:	n/a	n/a
2	ATF2	chr19:53696341-53696692	H1-hESC	embryonic stem cell:	n/a	n/a
3	BACH1	chr19:53700005-53700557	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr19:53696179-53696305	H1-hESC	embryonic stem cell:	n/a	n/a
5	BHLHE40	chr19:53696330-53696718	K562	blood:	n/a	n/a
6	BHLHE40	chr19:53698601-53698837	GM12878	blood:	n/a	n/a
7	BHLHE40	chr19:53698652-53698829	K562	blood:	n/a	n/a
8	BRCA1	chr19:53696315-53697043	H1-hESC	embryonic stem cell:	n/a	n/a
9	CBX3	chr19:53696473-53696709	K562	blood:	n/a	n/a
10	CBX3	chr19:53688313-53688728	K562	blood:	n/a	n/a
11	CCNT2	chr19:53696493-53696794	K562	blood:	n/a	n/a
12	CEBPB	chr19:53676237-53676414	HepG2	liver:	n/a	n/a
13	CEBPB	chr19:53676182-53676483	IMR90	lung:	n/a	n/a
14	CEBPB	chr19:53676161-53676505	HepG2	liver:	n/a	n/a
15	CEBPB	chr19:53676213-53676474	MCF-7	breast:	n/a	n/a
16	CEBPB	chr19:53676150-53676487	K562	blood:	n/a	n/a
17	CEBPB	chr19:53676139-53676526	K562	blood:	n/a	n/a
18	CEBPB	chr19:53676206-53676375	K562	blood:	n/a	n/a
19	CEBPB	chr19:53685649-53685941	IMR90	lung:	n/a	n/a
20	CEBPB	chr19:53676130-53676515	Hela-S3	cervix:	n/a	n/a
21	CEBPB	chr19:53696413-53696725	K562	blood:	n/a	n/a
22	CEBPB	chr19:53696599-53696928	K562	blood:	n/a	n/a
23	CEBPD	chr19:53676214-53676520	K562	blood:	n/a	n/a
24	CHD1	chr19:53696275-53696352	H1-hESC	embryonic stem cell:	n/a	n/a
25	CHD2	chr19:53686488-53686939	Hela-S3	cervix:	n/a	n/a
26	CHD2	chr19:53696473-53696936	K562	blood:	n/a	n/a
27	CHD2	chr19:53696117-53696928	H1-hESC	embryonic stem cell:	n/a	n/a
28	CHD2	chr19:53700567-53700576	K562	blood:	n/a	n/a
29	CREB1	chr19:53698604-53698892	H1-hESC	embryonic stem cell:	n/a	n/a
30	CTCF	chr19:53692998-53693324	K562	blood:	n/a	n/a
31	CTCF	chr19:53698557-53698878	Spleen_OC	spleen:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725
32	CTCF	chr19:53693040-53693190	A549	lung:	n/a	n/a
33	CTCF	chr19:53698478-53698945	H1-hESC	embryonic stem cell:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725
34	CTCF	chr19:53693093-53693214	Spleen_OC	spleen:	n/a	n/a
35	CTCF	chr19:53693600-53693750	WERI-Rb-1	eye:	n/a	n/a
36	CTCF	chr19:53698604-53698906	T-47D	breast:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725
37	CTCF	chr19:53699300-53699450	GM12871	blood:	n/a	n/a
38	CTCF	chr19:53698569-53698874	HUVEC	blood vessel:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725
39	CTCF	chr19:53698680-53698830	HRE	kidney:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725
40	CTCF	chr19:53698578-53698860	Gliobla	brain:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725
41	CTCF	chr19:53693097-53693203	MCF-7	breast:	n/a	n/a
42	CTCF	chr19:53693005-53693263	A549	lung:	n/a	n/a
43	CTCF	chr19:53688501-53688578	GM10248	blood:	n/a	n/a
44	CTCF	chr19:53698603-53698860	GM19240	blood:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725
45	CTCF	chr19:53692843-53693431	K562	blood:	n/a	n/a
46	CTCF	chr19:53698621-53698835	GM12891	blood:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725
47	CTCF	chr19:53692843-53692882	Lung_OC	lung:	n/a	n/a
48	CTCF	chr19:53688464-53688667	GM19240	blood:	n/a	n/a
49	CTCF	chr19:53698593-53698846	HepG2	liver:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725
50	CTCF	chr19:53698362-53699110	A549	lung:	n/a	chr19:53698716-53698737 chr19:53698715-53698731 chr19:53698718-53698725

(count:1098 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:53696753-53696803	PrEC	prostate:	n/a
2	chr19:53697534-53697584	HRE	kidney:	n/a
3	chr19:53697124-53697174	H1-hESC	embryonic stem cell:	embryo
4	chr19:53696728-53696778	HIPEpiC	eye:	n/a
5	chr19:53665821-53665871	NB4	blood:	n/a
6	chr19:53667689-53667739	ECC-1	luminal epithelium:	n/a
7	chr19:53696569-53696619	T-47D	breast:	n/a
8	chr19:53696569-53696619	SAEC	small airway:	n/a
9	chr19:53696753-53696803	AG04449	skin:	fetal
10	chr19:53696753-53696803	H1-hESC	embryonic stem cell:	embryo
11	chr19:53696326-53696376	GM12891	blood:	n/a
12	chr19:53696886-53696936	MCF10A-Er-Src	breast:	n/a
13	chr19:53693063-53693113	NHBE	bronchial:	n/a
14	chr19:53696649-53696699	BE2_C	brain:	n/a
15	chr19:53697124-53697174	HCF	heart:	n/a
16	chr19:53696728-53696778	AG04449	skin:	fetal
17	chr19:53696642-53696692	HRCEpiC	kidney:	n/a
18	chr19:53696649-53696699	AG09319	gingival:	n/a
19	chr19:53693063-53693113	SK-N-SH	brain:	n/a
20	chr19:53700527-53700577	SK-N-SH	brain:	n/a
21	chr19:53696649-53696699	PrEC	prostate:	n/a
22	chr19:53697284-53697334	HAEpiC	amniotic membrane:	n/a
23	chr19:53696217-53696267	Jurkat	blood:	n/a
24	chr19:53693063-53693113	Hepatocyte	liver:	n/a
25	chr19:53696326-53696376	ovcar-3	ovarian:	n/a
26	chr19:53697124-53697174	U87	brain:	n/a
27	chr19:53697534-53697584	HIPEpiC	eye:	n/a
28	chr19:53695062-53695112	HIPEpiC	eye:	n/a
29	chr19:53696728-53696778	HCT-116	colon:	n/a
30	chr19:53696326-53696376	AG04450	lung:	fetal
31	chr19:53697534-53697584	GM12892	blood:	n/a
32	chr19:53696642-53696692	PFSK-1	brain:	n/a
33	chr19:53696217-53696267	AG09319	gingival:	n/a
34	chr19:53697534-53697584	HRCEpiC	kidney:	n/a
35	chr19:53696217-53696267	SKMC	muscle:	n/a
36	chr19:53700527-53700577	CMK	blood:	n/a
37	chr19:53696569-53696619	MCF10A-Er-Src	breast:	n/a
38	chr19:53667689-53667739	MCF-7	breast:	n/a
39	chr19:53696753-53696803	K562	blood:	n/a
40	chr19:53700527-53700577	HCPEpiC	choroid plexus:	n/a
41	chr19:53695062-53695112	HUVEC	blood vessel:	n/a
42	chr19:53695062-53695112	AG04450	lung:	fetal
43	chr19:53697534-53697584	ProgFib	skin:	n/a
44	chr19:53667689-53667739	HepG2	liver:	n/a
45	chr19:53697124-53697174	HRPEpiC	eye:	n/a
46	chr19:53696649-53696699	Caco-2	colon:	n/a
47	chr19:53696753-53696803	BE2_C	brain:	n/a
48	chr19:53696886-53696936	SK-N-MC	brain:	n/a
49	chr19:53697534-53697584	GM12891	blood:	n/a
50	chr19:53697534-53697584	AG04449	skin:	fetal

(count:13 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:53705415..53707075-chr19:53718366..53721132,2	MCF-7	breast:
2	chr19:53695457..53697741-chr19:53699175..53701996,2	K562	blood:
3	chr19:53695457..53697741-chr19:53699175..53701996,2	K562	blood:
4	chr19:53699014..53701688-chr19:53703459..53706126,2	K562	blood:
5	chr19:53692021..53693951-chr19:53695076..53697230,2	K562	blood:
6	chr19:53686910..53689224-chr19:53694726..53696698,2	K562	blood:
7	chr19:53698678..53699363-chr19:54014997..54015830,3	MCF-7	breast:
8	chr19:53685672..53687787-chr19:53698865..53701833,2	MCF-7	breast:
9	chr19:53700585..53702772-chr19:53706802..53709941,3	MCF-7	breast:
10	chr19:53700585..53702772-chr19:53706802..53709941,3	MCF-7	breast:
11	chr19:53685574..53688103-chr19:53699507..53701678,2	K562	blood:
12	chr19:53698251..53699428-chr19:54295942..54296559,3	MCF-7	breast:
13	chr19:53462207..53464223-chr19:53697419..53699092,2	MCF-7	breast:

(count:18 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF665-1	chr19:53682821-53683237	NONHSAT067643
2	lnc-ZNF665-1	chr19:53696565-53696580	NONHSAT067644
3	lnc-VN1R2-7	chr19:53665681-53665836	ENSG00000268842.1
4	lnc-ZNF665-1	chr19:53683900-53686196	NONHSAT067645
5	lnc-ZNF665-1	chr19:53696565-53696639	NONHSAT067643
6	lnc-VN1R2-6	chr19:53700364-53700515	ENSG00000269051.1
7	lnc-VN1R2-6	chr19:53703877-53703956	ENSG00000269051.1
8	lnc-ZNF665-1	chr19:53686137-53686196	NONHSAT067644
9	lnc-ZNF665-1	chr19:53696565-53696619	NONHSAT067645
10	lnc-ZNF665-1	chr19:53686137-53686196	NONHSAT067643
11	lnc-ZNF665-1	chr19:53694972-53695088	NONHSAT067644
12	lnc-ZNF665-2	chr19:53667103-53667152	NONHSAT067641
13	lnc-VN1R2-7	chr19:53666614-53666816	ENSG00000268842.1
14	lnc-ZNF665-1	chr19:53693439-53693573	NONHSAT067644
15	lnc-VN1R2-6	chr19:53707269-53707395	ENSG00000269051.1
16	lnc-ZNF665-1	chr19:53682950-53683237	NONHSAT067644
17	lnc-VN1R2-6	chr19:53705805-53705955	ENSG00000269051.1
18	lnc-VN1R2-8	chr19:53669046-53669074	NONHSAT067638

No data

Variant related genes	Relation type
ENSG00000269051	TF binding region
ZNF665	TF binding region
ZNF347	TF binding region
ENSG00000269051	CpG island
ZNF665	CpG island
ZNF347	CpG island
ENSG00000269051	chromatin interactions
ENSG00000197497	chromatin interactions

Extended variants
information (count: 1947 )
Associated
traits (count: 74 )

Variant overlapped rSNPs/rCNVs (count:1947 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs369885604	chr19:53665821-53665822	Weak transcription ZNF genes & repeats	CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
2	rs574029755	chr19:53665830-53665831	Weak transcription ZNF genes & repeats	CpG island lncRNA	1 gene(s)	Overlapped CNVs	n/a
3	rs375017838	chr19:53665849-53665850	Weak transcription ZNF genes & repeats	CpG island	1 gene(s)	Overlapped CNVs	n/a
4	rs78350936	chr19:53665850-53665851	Weak transcription ZNF genes & repeats	CpG island	1 gene(s)	Overlapped CNVs	n/a
5	rs191224558	chr19:53665871-53665872	Weak transcription ZNF genes & repeats	CpG island	1 gene(s)	Overlapped CNVs	n/a
6	rs540646645	chr19:53665882-53665883	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs559432548	chr19:53665917-53665918	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs563542431	chr19:53665935-53665936	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs183076648	chr19:53665966-53665967	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs556086994	chr19:53666105-53666106	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs146693184	chr19:53666106-53666107	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs144589625	chr19:53666136-53666137	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs372398522	chr19:53666269-53666270	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs560719597	chr19:53666274-53666275	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs528230014	chr19:53666318-53666319	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs187675394	chr19:53666347-53666348	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs559547709	chr19:53666356-53666357	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs139803535	chr19:53666374-53666375	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs192593712	chr19:53666401-53666402	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs12977280	chr19:53666435-53666436	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs570721348	chr19:53666477-53666478	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs11668679	chr19:53666479-53666480	Weak transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs147575004	chr19:53666518-53666519	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs567540022	chr19:53666565-53666566	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs373886917	chr19:53666570-53666571	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs550106742	chr19:53666579-53666580	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs553477567	chr19:53666582-53666583	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs571483703	chr19:53666590-53666591	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs538798098	chr19:53666642-53666643	Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
30	rs568635891	chr19:53666644-53666645	Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
31	rs1133146	chr19:53666660-53666661	Weak transcription ZNF genes & repeats	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs575542318	chr19:53666670-53666671	Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
33	rs542548575	chr19:53666671-53666672	Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
34	rs1133145	chr19:53666745-53666746	Weak transcription ZNF genes & repeats	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs140353084	chr19:53666753-53666754	Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
36	rs539960910	chr19:53666788-53666789	Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
37	rs187877009	chr19:53666793-53666794	Weak transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
38	rs367717505	chr19:53666830-53666831	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs34751425	chr19:53666840-53666841	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
40	rs545148675	chr19:53666858-53666859	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs117069309	chr19:53666910-53666911	ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs544868610	chr19:53666969-53666970	ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs73057857	chr19:53666984-53666985	ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs576346889	chr19:53666993-53666994	ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs151291979	chr19:53667108-53667109	ZNF genes & repeats Weak transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs543641475	chr19:53667120-53667121	ZNF genes & repeats Weak transcription	TF binding region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs12971799	chr19:53667126-53667127	ZNF genes & repeats Weak transcription	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs6509728	chr19:53667147-53667148	ZNF genes & repeats Weak transcription	TF binding region lncRNA	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs12971840	chr19:53667171-53667172	ZNF genes & repeats Weak transcription	TF binding region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
50	rs6509729	chr19:53667184-53667185	ZNF genes & repeats Weak transcription	TF binding region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:74)

Disease	PMID	Source
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Medulloblastoma	21979893	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Ductal carcinoma	22052326	CNVD
Congenital nephrotic syndrome	18421352	CNVD
Astrocytoma	17934521	CNVD
Leukemia	17361228	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Breast cancer	17603634	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Oligodendroglial tumors	17285580	CNVD
renal disease	20603712	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Salivary gland adenoid cystic carcinoma	17545515	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Chordoma	18071362	CNVD
Urothelial carcinoma	21177765	CNVD
Metanephric adenoma	20802469	CNVD
Acute myeloid leukemia	16864856	CNVD
Bladder cancer	21909424	CNVD
Medulloblastoma	16783165	CNVD
Acute myeloid leukemia	20729466	CNVD
Ovarian cancer	22174824	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Wilms tumour	21544195	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Congenital anomalies of the kidney and urinary tract	18852474	CNVD
Glioblastoma multiforme	17002787	CNVD
Cervical cancer	21062161	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Prostate cancer	16573809	CNVD
small cell lung cancer	20016488	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Myelofibrosis	22110671	CNVD
Gastric adenocarcinoma	19115996	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Lung cancer	18438408	CNVD
Colorectal cancer	16272173	CNVD
Ovarian cancer	21781307	CNVD
Neuroblastoma	20406844	CNVD
Melanoma	17363583	CNVD
Breast cancer	21785460	CNVD
Adrenocortical carcinoma	18281524	CNVD
Breast cancer	20459607	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Basal cell lymphoma	19029149	CNVD
Diffuse large b-cell lymphoma	19029149	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD

Chromatin state (count:1728 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:53662600-53668800	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr19:53662800-53668200	Weak transcription	Pancreas	Pancrea
3	chr19:53663000-53667000	Weak transcription	Brain Hippocampus Middle	brain
4	chr19:53663000-53667600	Weak transcription	Ovary	ovary
5	chr19:53663000-53668000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr19:53664400-53670200	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr19:53664800-53695400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr19:53665800-53667600	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr19:53666600-53670400	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
10	chr19:53666800-53667000	Weak transcription	Stomach Smooth Muscle	stomach
11	chr19:53666800-53669600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr19:53667000-53669400	ZNF genes & repeats	Primary B cells from cord blood	blood
13	chr19:53667000-53669800	ZNF genes & repeats	Brain Hippocampus Middle	brain
14	chr19:53667000-53670000	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr19:53667000-53670200	ZNF genes & repeats	Fetal Brain Female	brain
16	chr19:53667000-53670400	ZNF genes & repeats	Adipose Nuclei	Adipose
17	chr19:53667200-53670200	ZNF genes & repeats	Primary T helper cells PMA-I stimulated	--
18	chr19:53667600-53669400	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
19	chr19:53667600-53669600	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr19:53667600-53669600	ZNF genes & repeats	Cortex derived primary cultured neurospheres	brain
21	chr19:53667600-53669600	ZNF genes & repeats	Ovary	ovary
22	chr19:53667600-53670000	ZNF genes & repeats	Duodenum Smooth Muscle	Duodenum
23	chr19:53667600-53670200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr19:53667800-53668600	ZNF genes & repeats	Primary T killer memory cells from peripheral blood	blood
25	chr19:53667800-53669600	ZNF genes & repeats	H1 Cell Line	embryonic stem cell
26	chr19:53667800-53669600	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
27	chr19:53667800-53669600	ZNF genes & repeats	Fetal Lung	lung
28	chr19:53667800-53669600	ZNF genes & repeats	Left Ventricle	heart
29	chr19:53667800-53670000	ZNF genes & repeats	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
30	chr19:53667800-53670600	ZNF genes & repeats	Dnd41	blood
31	chr19:53668000-53669400	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
32	chr19:53668000-53669400	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived
33	chr19:53668000-53669400	ZNF genes & repeats	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr19:53668000-53669400	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
35	chr19:53668000-53669400	ZNF genes & repeats	Brain Cingulate Gyrus	brain
36	chr19:53668000-53669600	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
37	chr19:53668000-53669600	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
38	chr19:53668000-53669600	ZNF genes & repeats	Duodenum Mucosa	Duodenum
39	chr19:53668000-53669600	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
40	chr19:53668000-53669600	ZNF genes & repeats	Fetal Muscle Leg	muscle
41	chr19:53668000-53669800	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
42	chr19:53668000-53669800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr19:53668000-53669800	ZNF genes & repeats	Colon Smooth Muscle	Colon
44	chr19:53668000-53670000	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
45	chr19:53668000-53670000	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr19:53668200-53668800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr19:53668200-53668800	ZNF genes & repeats	Pancreas	Pancrea
48	chr19:53668200-53669200	ZNF genes & repeats	Muscle Satellite Cultured Cells	--
49	chr19:53668200-53669400	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
50	chr19:53668200-53669400	ZNF genes & repeats	Brain Germinal Matrix	brain

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