Variant report

Variant esv2763673
Chromosome Location chr20:52637074-52668126
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:215 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:52566400-52644800 Weak transcription Gastric stomach
2 chr20:52618800-52644400 Weak transcription Rectal Mucosa Donor 29 rectum
3 chr20:52631400-52641400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr20:52633800-52638600 Weak transcription Brain Cingulate Gyrus brain
5 chr20:52633800-52641200 Weak transcription Brain Angular Gyrus brain
6 chr20:52634000-52638600 Weak transcription Brain Anterior Caudate brain
7 chr20:52634800-52645400 Weak transcription Fetal Lung lung
8 chr20:52635000-52637200 Weak transcription Brain Hippocampus Middle brain
9 chr20:52635800-52641800 Enhancers Brain Substantia Nigra brain
10 chr20:52636000-52641200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr20:52636400-52637200 Enhancers Primary monocytes fromperipheralblood blood
12 chr20:52636600-52640600 Weak transcription Stomach Mucosa stomach
13 chr20:52636800-52637200 Enhancers GM12878-XiMat blood
14 chr20:52637000-52637600 Strong transcription Rectal Mucosa Donor 31 rectum
15 chr20:52637200-52638800 Enhancers Brain Hippocampus Middle brain
16 chr20:52637600-52640400 Weak transcription Rectal Mucosa Donor 31 rectum
17 chr20:52638600-52638800 Enhancers Brain Anterior Caudate brain
18 chr20:52638600-52639200 Enhancers Brain Cingulate Gyrus brain
19 chr20:52638800-52639400 Weak transcription Brain Anterior Caudate brain
20 chr20:52638800-52640000 Weak transcription Brain Hippocampus Middle brain
21 chr20:52639200-52640800 Weak transcription Brain Cingulate Gyrus brain
22 chr20:52639400-52640200 Enhancers Brain Anterior Caudate brain
23 chr20:52639600-52641000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr20:52640000-52640600 Enhancers Brain Hippocampus Middle brain
25 chr20:52640200-52641000 Weak transcription NHDF-Ad bronchial
26 chr20:52640200-52641200 Weak transcription Brain Anterior Caudate brain
27 chr20:52640400-52642200 Strong transcription Rectal Mucosa Donor 31 rectum
28 chr20:52640600-52641400 Genic enhancers Brain Hippocampus Middle brain
29 chr20:52640600-52641600 Strong transcription Stomach Mucosa stomach
30 chr20:52640800-52642000 Enhancers Brain Cingulate Gyrus brain
31 chr20:52640800-52643800 Enhancers Fetal Brain Male brain
32 chr20:52641000-52641400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr20:52641000-52642000 Enhancers NHDF-Ad bronchial
34 chr20:52641000-52643200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr20:52641000-52643400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr20:52641200-52641400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr20:52641200-52641400 Enhancers Brain Angular Gyrus brain
38 chr20:52641200-52641400 Flanking Active TSS Brain Anterior Caudate brain
39 chr20:52641200-52641400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
40 chr20:52641200-52641600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr20:52641200-52641600 Enhancers Brain Inferior Temporal Lobe brain
42 chr20:52641200-52642000 Enhancers HSMMtube muscle
43 chr20:52641200-52642400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
44 chr20:52641200-52642400 Enhancers Osteobl bone
45 chr20:52641200-52644400 Enhancers Cortex derived primary cultured neurospheres brain
46 chr20:52641400-52641600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
47 chr20:52641400-52641800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr20:52641400-52641800 Weak transcription Brain Angular Gyrus brain
49 chr20:52641400-52641800 Enhancers Fetal Kidney kidney
50 chr20:52641400-52642000 Enhancers Colon Smooth Muscle Colon

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