Variant report
Variant | esv2763699 |
---|---|
Chromosome Location | chr22:21542615-21845355 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:6151)
- CpG islands (count:2321)
- Chromatin interactive region (count:19)
- LncRNA region (count:50)
- Mature miRNA region (count: 0)
- miRNA target sites (count:3)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr22:21592118-21592318 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr22:21811453-21812088 | HepG2 | liver: | n/a | n/a |
3 | ATF1 | chr22:21822456-21822596 | K562 | blood: | n/a | n/a |
4 | ATF3 | chr22:21799163-21799497 | K562 | blood: | n/a | n/a |
5 | BACH1 | chr22:21810600-21810850 | H1-hESC | embryonic stem cell: | n/a | n/a |
6 | BATF | chr22:21643759-21643961 | GM12878 | blood: | n/a | n/a |
7 | BATF | chr22:21670784-21671270 | GM12878 | blood: | n/a | n/a |
8 | BATF | chr22:21680752-21681052 | GM12878 | blood: | n/a | n/a |
9 | BATF | chr22:21668510-21668775 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr22:21667975-21668247 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr22:21671350-21671638 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr22:21604490-21604702 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr22:21665627-21665835 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr22:21667217-21667566 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr22:21644369-21644724 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr22:21643643-21643852 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr22:21666477-21666908 | GM12878 | blood: | n/a | chr22:21666820-21666830 |
18 | BATF | chr22:21822965-21823191 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr22:21680010-21680279 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr22:21661486-21661800 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr22:21655763-21656117 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr22:21754245-21754462 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr22:21598960-21599438 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr22:21686970-21687232 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr22:21664688-21664901 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr22:21664502-21664702 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr22:21561792-21562184 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr22:21661897-21662111 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr22:21680010-21680280 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr22:21544870-21545207 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr22:21686882-21687165 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr22:21596510-21596681 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr22:21822372-21822581 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr22:21640199-21640520 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr22:21662377-21662584 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr22:21771592-21771785 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr22:21642702-21642952 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr22:21598826-21599972 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr22:21545572-21545926 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr22:21595541-21595907 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr22:21597069-21597517 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr22:21622260-21622514 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr22:21691873-21692088 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr22:21582473-21582683 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr22:21679248-21679454 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr22:21629855-21630214 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr22:21630913-21631158 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr22:21659286-21659493 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr22:21633690-21634128 | GM12878 | blood: | n/a | n/a |
50 | BATF | chr22:21659324-21659520 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21714051-21714101 | NT2-D1 | testis: | n/a |
2 | chr22:21822779-21822829 | Hepatocyte | liver: | n/a |
3 | chr22:21692413-21692463 | PANC-1 | pancreas: | n/a |
4 | chr22:21714051-21714101 | NT2-D1 | testis: | n/a |
5 | chr22:21822779-21822829 | Hepatocyte | liver: | n/a |
6 | chr22:21692413-21692463 | PANC-1 | pancreas: | n/a |
7 | chr22:21710822-21710872 | NHDF-neo | bronchial: | n/a |
8 | chr22:21618908-21618958 | A549 | lung: | n/a |
9 | chr22:21822779-21822829 | PrEC | prostate: | n/a |
10 | chr22:21798159-21798209 | SKMC | muscle: | n/a |
11 | chr22:21692413-21692463 | RPTEC | kidney: | n/a |
12 | chr22:21718166-21718216 | HUVEC | blood vessel: | n/a |
13 | chr22:21820215-21820265 | HRE | kidney: | n/a |
14 | chr22:21800832-21800882 | SAEC | small airway: | n/a |
15 | chr22:21621725-21621775 | HAEpiC | amniotic membrane: | n/a |
16 | chr22:21804711-21804761 | HMEC | breast: | n/a |
17 | chr22:21621725-21621775 | HCPEpiC | choroid plexus: | n/a |
18 | chr22:21692413-21692463 | PrEC | prostate: | n/a |
19 | chr22:21714908-21714958 | ECC-1 | luminal epithelium: | n/a |
20 | chr22:21715770-21715820 | NB4 | blood: | n/a |
21 | chr22:21798794-21798844 | RPTEC | kidney: | n/a |
22 | chr22:21735028-21735078 | PrEC | prostate: | n/a |
23 | chr22:21770855-21770905 | U87 | brain: | n/a |
24 | chr22:21714908-21714958 | HRPEpiC | eye: | n/a |
25 | chr22:21772272-21772322 | HUVEC | blood vessel: | n/a |
26 | chr22:21710822-21710872 | Hela-S3 | cervix: | n/a |
27 | chr22:21660828-21660878 | ECC-1 | luminal epithelium: | n/a |
28 | chr22:21660828-21660878 | AG04449 | skin: | fetal |
29 | chr22:21695329-21695379 | RPTEC | kidney: | n/a |
30 | chr22:21710822-21710872 | MCF10A-Er-Src | breast: | n/a |
31 | chr22:21774669-21774719 | T-47D | breast: | n/a |
32 | chr22:21770855-21770905 | HCM | heart: | n/a |
33 | chr22:21621725-21621775 | A549 | lung: | n/a |
34 | chr22:21823558-21823608 | HIPEpiC | eye: | n/a |
35 | chr22:21714908-21714958 | SK-N-MC | brain: | n/a |
36 | chr22:21773494-21773544 | LNCaP | prostate: | n/a |
37 | chr22:21770821-21770871 | HIPEpiC | eye: | n/a |
38 | chr22:21664376-21664426 | AG10803 | skin: | n/a |
39 | chr22:21822779-21822829 | CMK | blood: | n/a |
40 | chr22:21772272-21772322 | RPTEC | kidney: | n/a |
41 | chr22:21639231-21639281 | Hela-S3 | cervix: | n/a |
42 | chr22:21636474-21636524 | AG09309 | skin: | n/a |
43 | chr22:21621725-21621775 | SKMC | muscle: | n/a |
44 | chr22:21567227-21567277 | NT2-D1 | testis: | n/a |
45 | chr22:21801764-21801814 | HPAEpiC | pulmonary alveolar: | n/a |
46 | chr22:21800832-21800882 | Jurkat | blood: | n/a |
47 | chr22:21800832-21800882 | BJ | skin: | n/a |
48 | chr22:21821976-21822026 | GM12891 | blood: | n/a |
49 | chr22:21825384-21825434 | Caco-2 | colon: | n/a |
50 | chr22:21770855-21770905 | HRE | kidney: | n/a |
(count:19 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr22:21757262..21759399-chr22:21922328..21924805,2 | K562 | blood: | |
2 | chr22:21808392..21810710-chr22:21921341..21923915,2 | K562 | blood: | |
3 | chr22:21821074..21822903-chr22:21982952..21985553,3 | K562 | blood: | |
4 | chr22:21807608..21809744-chr22:21982806..21985295,2 | K562 | blood: | |
5 | chr22:21771959..21773481-chr22:21799015..21800950,2 | K562 | blood: | |
6 | chr22:21802032..21802554-chr22:22000750..22001398,2 | K562 | blood: | |
7 | chr22:21805758..21807437-chr22:21977909..21980793,2 | K562 | blood: | |
8 | chr22:21810804..21813538-chr22:21813549..21815062,2 | K562 | blood: | |
9 | chr22:21799659..21804135-chr22:21977326..21984068,6 | K562 | blood: | |
10 | chr22:21804862..21806367-chr22:21977646..21980199,2 | K562 | blood: | |
11 | chr22:21810804..21813538-chr22:21813549..21815062,2 | K562 | blood: | |
12 | chr12:89917592..89920413-chr22:21802852..21804467,2 | MCF-7 | breast: | |
13 | chr22:21799835..21803948-chr22:22005820..22007869,4 | K562 | blood: | |
14 | chr22:21771959..21773481-chr22:21799015..21800950,2 | K562 | blood: | |
15 | chr22:21802884..21804534-chr22:21977171..21979118,2 | K562 | blood: | |
16 | chr22:21821085..21824065-chr22:21983565..21985249,2 | K562 | blood: | |
17 | chr22:21800442..21802407-chr22:21977326..21979370,2 | K562 | blood: | |
18 | chr22:21801362..21804188-chr22:22036295..22038184,2 | K562 | blood: | |
19 | chr22:21801167..21803147-chr22:21981640..21983614,2 | K562 | blood: |
(count:50 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-GGT2-2 | chr22:21660358-21661314 | ENSG00000206142 |
2 | lnc-AP000552.1-1 | chr22:21668536-21669193 | ENSG00000237407 |
3 | lnc-GGT2-2 | chr22:21676237-21676616 | ENSG00000206142 |
4 | lnc-RIMBP3C-3 | chr22:21803801-21805329 | NONHSAT083673 |
5 | lnc-GGT2-2 | chr22:21676484-21676616 | ENSG00000206142 |
6 | lnc-GGT2-2 | chr22:21676592-21676616 | ENSG00000206142 |
7 | lnc-GGT2-2 | chr22:21668589-21668654 | ENSG00000206142 |
8 | lnc-GGT2-2 | chr22:21679120-21679256 | ENSG00000206142 |
9 | lnc-GGT2-2 | chr22:21666528-21666589 | NONHSAT083653 |
10 | lnc-GGT2-2 | chr22:21666029-21666062 | ENSG00000206142 |
11 | lnc-GGT2-2 | chr22:21677085-21677143 | ENSG00000206142 |
12 | lnc-GGT2-2 | chr22:21666528-21666589 | ENSG00000206142 |
13 | lnc-GGT2-2 | chr22:21676592-21676616 | ENSG00000206142 |
14 | lnc-AP000552.1-2 | chr22:21546011-21546438 | ENSG00000215498.4 |
15 | lnc-RIMBP3B-1 | chr22:21743480-21743780 | NONHSAT083665 |
16 | lnc-GGT2-2 | chr22:21673559-21673645 | ENSG00000206142 |
17 | lnc-RIMBP3B-2 | chr22:21726368-21726939 | l_2251_chr22:21725710-21727925_testes |
18 | lnc-GGT2-2 | chr22:21660358-21661314 | NONHSAT083653 |
19 | lnc-GGT2-2 | chr22:21673559-21673645 | ENSG00000206142 |
20 | lnc-RIMBP3B-2 | chr22:21725711-21725760 | l_2251_chr22:21725710-21727925_testes |
21 | lnc-GGT2-2 | chr22:21673559-21673645 | NONHSAT083653 |
22 | lnc-GGT2-2 | chr22:21675881-21676008 | ENSG00000206142 |
23 | lnc-HIC2-1 | chr22:21820783-21821265 | ENSG00000206140 |
24 | lnc-GGT2-2 | chr22:21677085-21677224 | ENSG00000206142 |
25 | lnc-GGT2-2 | chr22:21666029-21666062 | NONHSAT083653 |
26 | lnc-GGT2-2 | chr22:21676592-21676616 | ENSG00000206142 |
27 | lnc-RIMBP3B-2 | chr22:21727743-21727925 | l_2251_chr22:21725710-21727925_testes |
28 | lnc-GGT2-2 | chr22:21666528-21666589 | ENSG00000206142 |
29 | lnc-GGT2-2 | chr22:21666029-21666062 | ENSG00000206142 |
30 | lnc-GGT2-2 | chr22:21679120-21679331 | ENSG00000206142 |
31 | lnc-GGT2-2 | chr22:21677085-21677143 | ENSG00000206142 |
32 | lnc-GGT2-2 | chr22:21679120-21679226 | ENSG00000206142 |
33 | lnc-GGT2-2 | chr22:21666029-21666062 | ENSG00000206142 |
34 | lnc-GGT2-2 | chr22:21676592-21676616 | NONHSAT083653 |
35 | lnc-GGT2-2 | chr22:21666528-21666589 | ENSG00000206142 |
36 | lnc-GGT2-2 | chr22:21668589-21668654 | ENSG00000206142 |
37 | lnc-GGT2-2 | chr22:21677085-21677166 | NONHSAT083653 |
38 | lnc-GGT2-2 | chr22:21673559-21673645 | ENSG00000206142 |
39 | lnc-GGT2-2 | chr22:21677152-21677166 | ENSG00000206142 |
40 | lnc-AP000552.1-1 | chr22:21667209-21667325 | ENSG00000237407 |
41 | lnc-GGT2-2 | chr22:21673559-21673645 | ENSG00000206142 |
42 | lnc-GGT2-2 | chr22:21676430-21676616 | ENSG00000206142 |
43 | lnc-GGT2-2 | chr22:21668589-21668654 | NONHSAT083653 |
44 | lnc-GGT2-2 | chr22:21655286-21655713 | NONHSAT083653 |
45 | lnc-GGT2-2 | chr22:21677085-21677143 | ENSG00000206142 |
46 | lnc-GGT2-2 | chr22:21677085-21677273 | ENSG00000206142 |
47 | lnc-GGT2-2 | chr22:21679120-21679256 | ENSG00000206142 |
48 | lnc-GGT2-2 | chr22:21677085-21677147 | ENSG00000206142 |
49 | lnc-GGT2-2 | chr22:21668589-21668654 | ENSG00000206142 |
50 | lnc-GGT2-2 | chr22:21655286-21655713 | ENSG00000206142 |
No data |
(count:3 , 50 per page) page:
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No. | miRNA target gene | miRNA name | Chromosome Location | mirBase accession |
---|---|---|---|---|
1 | HIC2 | hsa-miR-30b-5p | chr22:21803819-21803840 | |
2 | HIC2 | hsa-miR-24-3p | chr22:21801714-21801720 | |
3 | HIC2 | hsa-miR-30b-5p | chr22:21803833-21803840 |
Variant related genes | Relation type |
---|---|
ENSG00000252020 | TF binding region |
BCRP6 | TF binding region |
ENSG00000226885 | TF binding region |
ENSG00000226534 | TF binding region |
ENSG00000237407 | TF binding region |
PPP1R26P5 | TF binding region |
TMEM191C | TF binding region |
ENSG00000252314 | TF binding region |
GGT2 | TF binding region |
RN7SKP63 | TF binding region |
RIMBP3B | TF binding region |
ENSG00000252402 | TF binding region |
HIC2 | TF binding region |
FAM230C | TF binding region |
POM121L8P | TF binding region |
PI4KAP2 | TF binding region |
ENSG00000252020 | CpG island |
BCRP6 | CpG island |
ENSG00000226885 | CpG island |
ENSG00000226534 | CpG island |
ENSG00000237407 | CpG island |
PPP1R26P5 | CpG island |
TMEM191C | CpG island |
ENSG00000252314 | CpG island |
GGT2 | CpG island |
RN7SKP63 | CpG island |
RIMBP3B | CpG island |
ENSG00000252402 | CpG island |
HIC2 | CpG island |
FAM230C | CpG island |
POM121L8P | CpG island |
PI4KAP2 | CpG island |
ENSG00000185651 | chromatin interactions |
ENSG00000100023 | chromatin interactions |
ENSG00000212102 | chromatin interactions |
ENSG00000161179 | chromatin interactions |
ENSG00000139323 | chromatin interactions |
ENSG00000257594 | chromatin interactions |
ENSG00000259075 | chromatin interactions |
ENSG00000270344 | chromatin interactions |
ENSG00000207751 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs376023262 | chr22:21548847-21548848 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs539026951 | chr22:21548855-21548856 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs556144556 | chr22:21548896-21548897 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs9625840 | chr22:21548911-21548912 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs2329677 | chr22:21549008-21549009 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs4051747 | chr22:21549028-21549029 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs576130 | chr22:21549055-21549056 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs62240940 | chr22:21549077-21549078 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs555594085 | chr22:21549121-21549122 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs62240941 | chr22:21549131-21549132 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs373484895 | chr22:21557230-21557231 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs377540303 | chr22:21557241-21557242 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs544114783 | chr22:21557266-21557267 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs201558515 | chr22:21557268-21557269 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs529637628 | chr22:21557278-21557279 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs75885650 | chr22:21557287-21557288 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs2543392 | chr22:21557288-21557289 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs79638301 | chr22:21557299-21557300 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs374393972 | chr22:21557300-21557301 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs112559344 | chr22:21557316-21557317 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs141850698 | chr22:21557348-21557349 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs200775095 | chr22:21557349-21557350 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs528170026 | chr22:21557383-21557384 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs112975494 | chr22:21557448-21557449 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs368713332 | chr22:21557470-21557471 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs372932442 | chr22:21557508-21557509 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs201898062 | chr22:21557626-21557627 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs370476211 | chr22:21557641-21557642 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs375052377 | chr22:21557652-21557653 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs200749114 | chr22:21557671-21557672 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs369044307 | chr22:21557676-21557677 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs551482741 | chr22:21557732-21557733 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs571338070 | chr22:21557748-21557749 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs368432962 | chr22:21557750-21557751 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs371302796 | chr22:21557758-21557759 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs537214413 | chr22:21557787-21557788 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs200170290 | chr22:21558100-21558101 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs201116619 | chr22:21558105-21558106 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs202186364 | chr22:21558160-21558161 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs376573313 | chr22:21558242-21558243 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs200230917 | chr22:21558428-21558429 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
42 | rs62240953 | chr22:21558437-21558438 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
43 | rs567175093 | chr22:21558448-21558449 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
44 | rs536148148 | chr22:21558461-21558462 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
45 | rs62240954 | chr22:21558486-21558487 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
46 | rs562821601 | chr22:21558489-21558490 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
47 | rs62240955 | chr22:21558498-21558499 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
48 | rs199937638 | chr22:21558524-21558525 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
49 | rs375849458 | chr22:21558557-21558558 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
50 | rs369855411 | chr22:21558575-21558576 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Hodgkin''s lymphoma | 18641027 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Velocardiofacial syndrome | 20111667 | CNVD |
Medulloblastoma | 21979893 | CNVD |
sporadic solitary meningiomas | 19589153 | CNVD |
Myofibroblastic sarcoma | 19369631 | CNVD |
Autism | 22495311 | CNVD |
Lung cancer | 18438408 | CNVD |
Emanuel syndrome | 21549014 | CNVD |
Digeorge syndrome | 22283845 | CNVD |
Schizophrenia | 17504246 | CNVD |
Digeorge syndrome | 18033723 | CNVD |
22q11 deletion syndrome | 17034021 | CNVD |
22q11 deletion syndrome | 22511897 | CNVD |
22q11 deletion syndrome | 16829213 | CNVD |
Autism | 22067053 | CNVD |
Autism | 19218893 | CNVD |
Biliary cancer | 22067053 | CNVD |
Congenital heart defect | 21390462 | CNVD |
Digeorge syndrome | 16617304 | CNVD |
Emanuel syndrome | 18184694 | CNVD |
Non-syndromic sensorineural hearing loss | 18184694 | CNVD |
Obsessive-compulsive disorder | 22067053 | CNVD |
Psychosis | 22067053 | CNVD |
Schizophrenia | 19415332 | CNVD |
Schizophrenia | 20587603 | CNVD |
Shprintzen syndrome | 19443537 | CNVD |
absent pulmonary valve syndrome | 16795129 | CNVD |
language delay | 22067053 | CNVD |
periventricular nodular heterotopia | 20648244 | CNVD |
renal disease | 17924346 | CNVD |
Schizophrenia | 20433910 | CNVD |
22q11 deletion syndrome | 17028864 | CNVD |
Schizophrenia | 16969581 | CNVD |
Non-syndromic sensorineural hearing loss | 17135275 | CNVD |
velo-cardio-facial syndrome | 17135275 | CNVD |
Digeorge syndrome | 18787571 | CNVD |
Autism | 18925931 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
22q11.2 microdeletion syndrome | 21547621 | CNVD |
Congenital heart defect | 21308838 | CNVD |
Digeorge syndrome | 16512914 | CNVD |
Digeorge syndrome | 20954168 | CNVD |
Nuchal translucency | 21837766 | CNVD |
Right aortic arch in the fetus | 17066500 | CNVD |
Shprintzen syndrome | 17117043 | CNVD |
Tetralogy of fallot | 17405110 | CNVD |
Velocardiofacial syndrome | 20140301 | CNVD |
Velocardiofacial syndrome | 16512914 | CNVD |
bone mass and metabolism | 20516202 | CNVD |
choanal atresia | 18209138 | CNVD |
extracardiac malformations | 17086578 | CNVD |
fetal heart defects | 21308838 | CNVD |
parathyroid gland dysfunction | 16793949 | CNVD |
prenatal diagnosis | 20453657 | CNVD |
velopharyngeal insufficiency | 19620585 | CNVD |
Prader-willi syndrome | 20942916 | CNVD |
22q11 deletion syndrome | 17653112 | CNVD |
Chronic myelomonocytic leukemia | 16760666 | CNVD |
Non-syndromic sensorineural hearing loss | 16829213 | CNVD |
Non-syndromic sensorineural hearing loss | 16760666 | CNVD |
Chordoma | 21602918 | CNVD |
Cancer | 21637783 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
Splenic marginal zone lymphoma | 21957467 | CNVD |
Congenital heart defect | 22511896 | CNVD |
Breast cancer | 17603634 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 17387387 | CNVD |
Seminomas | 18059402 | CNVD |
Cancer | 16751803 | CNVD |
Metanephric adenoma | 20802469 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Acute lymphoblastic leukemia | 19100363 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Metachromatic leukodystrophy | 18421352 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21858162 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Myelodysplastic syndrome | 21251322 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Prostate cancer | 18632612 | CNVD |
Glioblastoma multiforme | 22286061 | CNVD |
Cat eye syndrome | 21549014 | CNVD |
Digeorge syndrome | 21549014 | CNVD |
22q11.2 microdeletion syndrome | 22051516 | CNVD |
22q11.2 microdeletion syndrome | 18483005 | CNVD |
22q11.2 microdeletion syndrome | 19565140 | CNVD |
22q11.2 microdeletion syndrome | 20396437 | CNVD |
22q11.2 microdeletion syndrome | 21390462 | CNVD |
22q11.2 microdeletion syndrome | 21573985 | CNVD |
Austim spectrum disorder | 21302340 | CNVD |
Autism | 20970697 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Congenital heart defect | 21257016 | CNVD |
Developmental delay | 18414209 | CNVD |
DiGeorge-Velo cardiofacial | 19284877 | CNVD |
Epilepsy | 20970697 | CNVD |
Heart disease | 20551144 | CNVD |
Hughes'' syndrome | 16595601 | CNVD |
Mental retardation | 18414209 | CNVD |
Okamoto syndrome | 19046188 | CNVD |
Primary immunodeficiency | 22566803 | CNVD |
Schizophrenia | 20877625 | CNVD |
Schizophrenia | 20553308 | CNVD |
Schizophrenia | 21956041 | CNVD |
Schizophrenia | 20970697 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Velocardiofacial syndrome | 17556857 | CNVD |
Velocardiofacial syndrome | 20206275 | CNVD |
Velocardiofacial syndrome | 20970697 | CNVD |
delayed speech development | 21274400 | CNVD |
velo-cardio-facial syndrome | 16511839 | CNVD |
velo-cardio-facial syndrome | 21763005 | CNVD |
22q11.2 microdeletion syndrome | 18799940 | CNVD |
Digeorge syndrome | 20877625 | CNVD |
22q11.2 microdeletion syndrome | 18923514 | CNVD |
Congenital heart defect | 22185286 | CNVD |
DiGeorge-Velo cardiofacial | 16773131 | CNVD |
Digeorge syndrome | 20186050 | CNVD |
velo-cardio-facial conotruncal-face syndrome | 20186050 | CNVD |
22q11.2 microdeletion syndrome | 22116936 | CNVD |
Disorders of sex development | 22290220 | CNVD |
22q11.2 duplication syndrome | 18923514 | CNVD |
Autism | 22095694 | CNVD |
Mental retardation | 19951919 | CNVD |
Honadal dysgenesis | 21048976 | CNVD |
Mental retardation | 16773131 | CNVD |
22q11.2 microdeletion syndrome | 22395003 | CNVD |
22q11.2 microdeletion syndrome | 18691436 | CNVD |
22q11.2 microdeletion syndrome | 18053182 | CNVD |
22q11.2 microdeletion syndrome | 18324686 | CNVD |
22q11.2 microdeletion syndrome | 20074913 | CNVD |
Congenital heart defect | 20802965 | CNVD |
Congenital heart defect | 21134246 | CNVD |
DiGeorge syndrome | 19040613 | CNVD |
DiGeorge-Velo cardiofacial | 18179902 | CNVD |
Digeorge syndrome | 18172682 | CNVD |
Digeorge syndrome | 22470819 | CNVD |
Digeorge syndrome | 21364285 | CNVD |
Neuroendocrine carcinoma | 22470819 | CNVD |
Non-syndromic sensorineural hearing loss | 20069674 | CNVD |
Smith-Magenis syndrome | 18301319 | CNVD |
Tetralogy of fallot | 19144126 | CNVD |
Velo-cardio-facial syndrome | 21364285 | CNVD |
Velocardiofacial syndrome | 18788013 | CNVD |
cardiac malformation | 20573211 | CNVD |
cardiac malformation | 18172682 | CNVD |
velo-cardio-facial syndrome | 18636631 | CNVD |
Schizophrenia | 21822266 | CNVD |
synaptic plasticity | 21368174 | CNVD |
Schizophrenia | 18043741 | CNVD |
sporadic birth defects | 19047251 | CNVD |
Autism | 19046189 | CNVD |
DiGeorge-Velo cardiofacial | 19047251 | CNVD |
Hypernasal speech | 21968682 | CNVD |
Mental retardation | 17339581 | CNVD |
diverse phenotype | 16760730 | CNVD |
Mental retardation | 20152051 | CNVD |
Breast cancer | 16608533 | CNVD |
Melanoma | 18172304 | CNVD |
Ovarian cancer | 22174824 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Wilms tumour | 21544195 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Autism | 19521722 | CNVD |
Digeorge syndrome | 19521722 | CNVD |
Autism | 19955444 | CNVD |
Schizophrenia | 19955444 | CNVD |
Mental retardation | 17124404 | CNVD |
Tourette syndrome | 20069037 | CNVD |
Williams-beuren syndrome | 18553513 | CNVD |
Emphysema | 19352772 | CNVD |
Schizophrenia | 17160897 | CNVD |
Cancer | 17160897 | CNVD |
Neuropsychiatric disorder | 20069037 | CNVD |
DiGeorge-Velo cardiofacial | 17597781 | CNVD |
Digeorge syndrome | 17576883 | CNVD |
Schizophrenia | 18806272 | CNVD |
Schizophrenia | 18990708 | CNVD |
Velocardiofacial syndrome | 17576883 | CNVD |
Schizophrenia | 20075378 | CNVD |
Neurodevelopmental disorder | 17015230 | CNVD |
Cancer | 17440070 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
22q11.2 deletion syndrome | 22563040 | CNVD |
Disease | 21346257 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Developmental delay | 21147756 | CNVD |
Type 2 diabetes | 21526130 | CNVD |
Cancer | 20164919 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Schizophrenia | 21399695 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Prader-willi syndrome | 20588305 | CNVD |
T-cell acute lymphoblastic leukemia | 21980252 | CNVD |
22q11.22 microdeletion syndrome | 19193630 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
low-grade B-cell lymphoma tumor | 18367492 | CNVD |
Schizophrenia | 20967226 | CNVD |
Cognitive impairment | 21505072 | CNVD |
Breast cancer | 22522925 | CNVD |
Gastrointestinal stromal cancer | 20877625 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Asthma | 21956041 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Systemic lupus erythematosus | 21956041 | CNVD |
Primary central nervous system lymphoma | 21088137 | CNVD |
22q11.23 microdeletion syndrome | 19193630 | CNVD |
Medulloblastoma | 21163964 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr22:21548800-21549200 | Enhancers | HepG2 | liver |
2 | chr22:21557200-21557400 | Enhancers | Fetal Muscle Trunk | muscle |
3 | chr22:21557400-21558400 | Weak transcription | Fetal Muscle Trunk | muscle |
4 | chr22:21558400-21558600 | Enhancers | Fetal Muscle Trunk | muscle |
5 | chr22:21558600-21559000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
6 | chr22:21558600-21559000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
7 | chr22:21558600-21559000 | Bivalent Enhancer | Fetal Muscle Trunk | muscle |
8 | chr22:21558600-21559000 | Enhancers | Fetal Muscle Leg | muscle |
9 | chr22:21559000-21560200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
10 | chr22:21559000-21560200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
11 | chr22:21560200-21560400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
12 | chr22:21560400-21560600 | Enhancers | HUES6 Cell Line | embryonic stem cell |
13 | chr22:21566000-21569400 | Weak transcription | Right Atrium | heart |
14 | chr22:21569800-21590800 | Weak transcription | Gastric | stomach |
15 | chr22:21570200-21570800 | Enhancers | HMEC | breast |
16 | chr22:21570400-21570600 | Bivalent Enhancer | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
17 | chr22:21570400-21570800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
18 | chr22:21570400-21570800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
19 | chr22:21576000-21576200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
20 | chr22:21576000-21576200 | Enhancers | Spleen | Spleen |
21 | chr22:21590600-21590800 | Enhancers | Stomach Mucosa | stomach |
22 | chr22:21590600-21591200 | Enhancers | Pancreas | Pancrea |
23 | chr22:21590800-21591000 | Enhancers | Gastric | stomach |
24 | chr22:21590800-21591800 | Weak transcription | Stomach Mucosa | stomach |
25 | chr22:21591000-21591800 | Weak transcription | Gastric | stomach |
26 | chr22:21591200-21591600 | Weak transcription | Pancreas | Pancrea |
27 | chr22:21591600-21592800 | Enhancers | Pancreas | Pancrea |
28 | chr22:21591800-21592000 | Enhancers | Duodenum Mucosa | Duodenum |
29 | chr22:21591800-21592200 | Enhancers | Fetal Intestine Large | intestine |
30 | chr22:21591800-21592200 | Enhancers | Fetal Intestine Small | intestine |
31 | chr22:21591800-21592200 | Enhancers | Gastric | stomach |
32 | chr22:21591800-21592200 | Enhancers | Stomach Mucosa | stomach |
33 | chr22:21591800-21592400 | Enhancers | HepG2 | liver |
34 | chr22:21592000-21592200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
35 | chr22:21592000-21592200 | Flanking Active TSS | Duodenum Mucosa | Duodenum |
36 | chr22:21592200-21592400 | Enhancers | Duodenum Mucosa | Duodenum |
37 | chr22:21592400-21592800 | Active TSS | Duodenum Mucosa | Duodenum |
38 | chr22:21598600-21599000 | Enhancers | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
39 | chr22:21604600-21605000 | Bivalent Enhancer | HepG2 | liver |
40 | chr22:21607400-21608600 | Enhancers | HepG2 | liver |
41 | chr22:21607800-21608200 | Enhancers | Fetal Intestine Small | intestine |
42 | chr22:21607800-21608600 | Enhancers | Fetal Intestine Large | intestine |
43 | chr22:21608400-21608600 | Enhancers | HSMMtube | muscle |
44 | chr22:21608600-21609800 | Weak transcription | Fetal Intestine Large | intestine |
45 | chr22:21608600-21609800 | Weak transcription | HepG2 | liver |
46 | chr22:21608600-21610400 | Weak transcription | HSMMtube | muscle |
47 | chr22:21609800-21610200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
48 | chr22:21609800-21610600 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |
49 | chr22:21609800-21610600 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
50 | chr22:21609800-21610600 | Enhancers | Hela-S3 | cervix |