Variant report

Variant	esv2763908
Chromosome Location	chr5:76083394-76134777
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1830)
CpG islands
(count:1712)
Chromatin interactive
region (count:20)
LncRNA
region (count:2)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1830 , 50 per page) page: 1 2 3 4 5 6 7 ... 37

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:76086428-76087095	K562	blood:	n/a	n/a
2	ARID3A	chr5:76116209-76116734	HepG2	liver:	n/a	n/a
3	ARID3A	chr5:76126576-76126776	K562	blood:	n/a	n/a
4	ARID3A	chr5:76086368-76087004	HepG2	liver:	n/a	n/a
5	ARID3A	chr5:76114553-76114860	HepG2	liver:	n/a	n/a
6	ARID3A	chr5:76101782-76102245	K562	blood:	n/a	n/a
7	ARID3A	chr5:76113989-76114292	HepG2	liver:	n/a	n/a
8	ATF1	chr5:76101722-76102174	K562	blood:	n/a	n/a
9	ATF1	chr5:76086458-76087131	K562	blood:	n/a	n/a
10	ATF2	chr5:76086364-76086842	GM12878	blood:	n/a	n/a
11	ATF2	chr5:76126950-76127363	GM12878	blood:	n/a	n/a
12	ATF2	chr5:76103823-76104436	H1-hESC	embryonic stem cell:	n/a	n/a
13	ATF2	chr5:76126912-76127331	GM12878	blood:	n/a	n/a
14	ATF2	chr5:76114079-76115052	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr5:76113947-76114568	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr5:76103843-76104561	H1-hESC	embryonic stem cell:	n/a	n/a
17	ATF3	chr5:76114447-76115003	A549	lung:	n/a	chr5:76114977-76114986 chr5:76114862-76114870
18	ATF3	chr5:76101689-76102467	A549	lung:	n/a	n/a
19	ATF3	chr5:76114432-76115010	A549	lung:	n/a	chr5:76114977-76114986 chr5:76114862-76114870
20	ATF3	chr5:76100044-76100672	A549	lung:	n/a	n/a
21	ATF3	chr5:76101627-76102562	A549	lung:	n/a	n/a
22	ATF3	chr5:76086333-76087061	A549	lung:	n/a	n/a
23	ATF3	chr5:76099975-76100655	A549	lung:	n/a	n/a
24	ATF3	chr5:76086822-76087094	K562	blood:	n/a	n/a
25	ATF3	chr5:76086335-76086970	A549	lung:	n/a	n/a
26	BACH1	chr5:76103704-76103712	K562	blood:	n/a	n/a
27	BACH1	chr5:76114200-76116153	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr5:76126596-76126774	K562	blood:	n/a	n/a
29	BATF	chr5:76086433-76086741	GM12878	blood:	n/a	chr5:76086559-76086569
30	BATF	chr5:76102000-76102358	GM12878	blood:	n/a	n/a
31	BATF	chr5:76086446-76086954	GM12878	blood:	n/a	chr5:76086559-76086569
32	BATF	chr5:76126956-76127325	GM12878	blood:	n/a	n/a
33	BCL11A	chr5:76126997-76127227	GM12878	blood:	n/a	chr5:76127105-76127114
34	BCL11A	chr5:76126931-76127279	GM12878	blood:	n/a	chr5:76127105-76127114
35	BCL11A	chr5:76086459-76086753	GM12878	blood:	n/a	n/a
36	BCL11A	chr5:76086438-76086837	GM12878	blood:	n/a	n/a
37	BCL3	chr5:76101399-76102582	A549	lung:	n/a	chr5:76102262-76102271
38	BCL3	chr5:76126569-76127455	A549	lung:	n/a	chr5:76127105-76127114
39	BCL3	chr5:76114082-76115135	A549	lung:	n/a	chr5:76114962-76114971 chr5:76114691-76114704
40	BCL3	chr5:76109782-76110506	A549	lung:	n/a	chr5:76110348-76110357
41	BCL3	chr5:76099724-76100840	A549	lung:	n/a	chr5:76100092-76100100 chr5:76100201-76100210
42	BCL3	chr5:76097061-76097862	A549	lung:	n/a	n/a
43	BCL3	chr5:76086154-76087174	A549	lung:	n/a	n/a
44	BCL3	chr5:76086213-76087155	A549	lung:	n/a	n/a
45	BCL3	chr5:76101997-76102356	GM12878	blood:	n/a	chr5:76102262-76102271
46	BCL3	chr5:76115978-76116822	A549	lung:	n/a	n/a
47	BCL3	chr5:76126926-76127294	GM12878	blood:	n/a	chr5:76127105-76127114
48	BCL3	chr5:76126983-76127322	GM12878	blood:	n/a	chr5:76127105-76127114
49	BCL3	chr5:76101545-76102516	A549	lung:	n/a	chr5:76102262-76102271
50	BCL3	chr5:76099974-76100817	A549	lung:	n/a	chr5:76100092-76100100 chr5:76100201-76100210

(count:1712 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:76112996-76113046	ProgFib	skin:	n/a
2	chr5:76114812-76114862	SKMC	muscle:	n/a
3	chr5:76119931-76119981	AG10803	skin:	n/a
4	chr5:76114373-76114423	HL-60	blood:	n/a
5	chr5:76112996-76113046	ProgFib	skin:	n/a
6	chr5:76114812-76114862	SKMC	muscle:	n/a
7	chr5:76119931-76119981	AG10803	skin:	n/a
8	chr5:76114373-76114423	HL-60	blood:	n/a
9	chr5:76115810-76115860	PANC-1	pancreas:	n/a
10	chr5:76114812-76114862	Caco-2	colon:	n/a
11	chr5:76114571-76114621	Jurkat	blood:	n/a
12	chr5:76112996-76113046	U87	brain:	n/a
13	chr5:76117747-76117797	HEEpiC	esophagus:	n/a
14	chr5:76112776-76112826	HCM	heart:	n/a
15	chr5:76112776-76112826	K562	blood:	n/a
16	chr5:76115309-76115359	MCF-7	breast:	n/a
17	chr5:76116169-76116219	AG09309	skin:	n/a
18	chr5:76116088-76116138	BJ	skin:	n/a
19	chr5:76115309-76115359	HRPEpiC	eye:	n/a
20	chr5:76108191-76108241	ECC-1	luminal epithelium:	n/a
21	chr5:76115810-76115860	HNPCEpiC	eye:	n/a
22	chr5:76112776-76112826	CMK	blood:	n/a
23	chr5:76134399-76134449	SK-N-SH_RA	brain:	n/a
24	chr5:76108729-76108779	AoSMC	blood vessel:	n/a
25	chr5:76087172-76087222	RPTEC	kidney:	n/a
26	chr5:76112996-76113046	GM06990	blood:	n/a
27	chr5:76116169-76116219	PFSK-1	brain:	n/a
28	chr5:76116169-76116219	A549	lung:	n/a
29	chr5:76119931-76119981	Hela-S3	cervix:	n/a
30	chr5:76114822-76114872	BE2_C	brain:	n/a
31	chr5:76115974-76116024	BJ	skin:	n/a
32	chr5:76116169-76116219	HUVEC	blood vessel:	n/a
33	chr5:76134399-76134449	AG10803	skin:	n/a
34	chr5:76111995-76112045	HMEC	breast:	n/a
35	chr5:76116169-76116219	Hepatocyte	liver:	n/a
36	chr5:76108191-76108241	HRCEpiC	kidney:	n/a
37	chr5:76112776-76112826	AG09319	gingival:	n/a
38	chr5:76134399-76134449	HCM	heart:	n/a
39	chr5:76115868-76115918	Jurkat	blood:	n/a
40	chr5:76115309-76115359	Caco-2	colon:	n/a
41	chr5:76115868-76115918	HPAEpiC	pulmonary alveolar:	n/a
42	chr5:76112996-76113046	Hepatocyte	liver:	n/a
43	chr5:76112776-76112826	NH-A	brain:	n/a
44	chr5:76108729-76108779	CMK	blood:	n/a
45	chr5:76114812-76114862	HPAEpiC	pulmonary alveolar:	n/a
46	chr5:76117747-76117797	ovcar-3	ovarian:	n/a
47	chr5:76134399-76134449	NHDF-neo	bronchial:	n/a
48	chr5:76134399-76134449	AG09309	skin:	n/a
49	chr5:76114522-76114572	HCT-116	colon:	n/a
50	chr5:76108729-76108779	HRPEpiC	eye:	n/a

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:76103612..76107653-chr5:76108707..76113004,3	MCF-7	breast:
2	chr5:76103612..76107653-chr5:76108707..76113004,3	MCF-7	breast:
3	chr5:76094721..76097053-chr5:76101788..76104241,2	K562	blood:
4	chr5:76094082..76095930-chr5:76098926..76101541,2	K562	blood:
5	chr5:76083391..76086055-chr5:76095285..76096948,2	MCF-7	breast:
6	chr5:76105222..76108652-chr5:76112389..76115245,3	K562	blood:
7	chr5:76094082..76095930-chr5:76098926..76101541,2	K562	blood:
8	chr5:76101619..76103504-chr5:76111998..76114759,2	K562	blood:
9	chr5:76115175..76117196-chr5:76160540..76162682,2	MCF-7	breast:
10	chr5:76113078..76116046-chr5:76145704..76148210,2	K562	blood:
11	chr5:76110973..76114089-chr5:76116480..76119427,3	K562	blood:
12	chr5:76123012..76125302-chr5:76125595..76128318,2	MCF-7	breast:
13	chr5:76106690..76108652-chr5:76112389..76115245,2	K562	blood:
14	chr5:76094721..76097053-chr5:76101788..76104241,2	K562	blood:
15	chr5:76110973..76114089-chr5:76116480..76119427,3	K562	blood:
16	chr19:796813..797729-chr5:76114268..76115162,3	HCT-116	colon:
17	chr5:76127088..76128697-chr5:76136604..76139100,2	K562	blood:
18	chr5:76115218..76117725-chr5:76325993..76327834,2	MCF-7	breast:
19	chr5:76083391..76086055-chr5:76095285..76096948,2	MCF-7	breast:
20	chr5:76123012..76125302-chr5:76125595..76128318,2	MCF-7	breast:

(count:2 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-F2RL2-4	chr5:76132727-76133020	NONHSAT102252
2	lnc-S100Z-1	chr5:76114806-76115096	NONHSAT102251

No data

Variant related genes	Relation type
RN7SL208P	TF binding region
F2RL1	TF binding region
RN7SL208P	CpG island
F2RL1	CpG island
ENSG00000164251	chromatin interactions
ENSG00000164252	chromatin interactions
ENSG00000171643	chromatin interactions
ENSG00000011304	chromatin interactions

Extended variants
information (count: 2144 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:2144 , 50 per page) page: 1 2 3 4 5 6 7 ... 43

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs189825346	chr5:76083404-76083405	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs78306815	chr5:76083405-76083406	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs192781169	chr5:76083480-76083481	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs114740716	chr5:76083481-76083482	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs184929233	chr5:76083495-76083496	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs35945927	chr5:76083512-76083513	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs189810580	chr5:76083514-76083515	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs115348446	chr5:76083610-76083611	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs148549907	chr5:76083618-76083619	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs555892293	chr5:76083694-76083695	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs114280403	chr5:76083790-76083791	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs145546576	chr5:76083842-76083843	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs542496806	chr5:76083905-76083906	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs561928464	chr5:76083927-76083928	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs147731784	chr5:76083943-76083944	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs541354508	chr5:76083944-76083945	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs564837450	chr5:76083972-76083973	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs369077237	chr5:76083983-76083984	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs142617998	chr5:76084005-76084006	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs550101192	chr5:76084006-76084007	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs201822724	chr5:76084007-76084008	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs386358197	chr5:76084008-76084009	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs113229922	chr5:76084009-76084010	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs368379043	chr5:76084038-76084039	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs529391598	chr5:76084039-76084040	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs35046050	chr5:76084072-76084073	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs112676217	chr5:76084080-76084081	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs111485496	chr5:76084082-76084083	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs68044006	chr5:76084083-76084084	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs386404162	chr5:76084088-76084089	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs59407966	chr5:76084091-76084092	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs201594927	chr5:76084092-76084093	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs7708300	chr5:76084144-76084145	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs568259504	chr5:76084185-76084186	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs181678172	chr5:76084206-76084207	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
36	rs73131647	chr5:76084207-76084208	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs570681719	chr5:76084261-76084262	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
38	rs147867550	chr5:76084284-76084285	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
39	rs372313096	chr5:76084326-76084327	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs375315009	chr5:76084337-76084338	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs575664518	chr5:76084346-76084347	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs533926607	chr5:76084400-76084401	Enhancers Weak transcription Flanking Active TSS Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs140456759	chr5:76084439-76084440	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs150416453	chr5:76084455-76084456	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs572294178	chr5:76084463-76084464	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs186330812	chr5:76084467-76084468	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs564527588	chr5:76084468-76084469	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs369533578	chr5:76084481-76084482	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
49	rs372786692	chr5:76084539-76084540	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
50	rs138223977	chr5:76084549-76084550	Enhancers Weak transcription Active TSS Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Breast cancer	22032731	CNVD
Prostate cancer	21965145	CNVD
Spinal muscular atrophy	21762474	CNVD
Esophageal cancer	20955586	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Ovarian cancer	20844748	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
Non-small cell lung cancer	21829676	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Hepatocellular carcinoma	16750200	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Breast cancer	19602461	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Merkel cell carcinoma	19020549	CNVD
Squamous cell cancer	20885788	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Spinal muscular atrophy	15981080	CNVD
Spinal muscular atrophy	18839960	CNVD
Spinal muscular atrophy	19716110	CNVD
Glioblastoma multiforme	22286061	CNVD
craniofacial dysmorphism	21918468	CNVD
Multiple myeloma	16616336	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	17133270	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ovarian cancer	21720365	CNVD
Acute myeloid leukemia	21251322	CNVD
Myelofibrosis	22110671	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Schizophrenia	23813976	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1687 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:76075600-76084200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr5:76076000-76084200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr5:76077800-76085800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr5:76078200-76084200	Enhancers	HUVEC	blood vessel
5	chr5:76079000-76083400	Weak transcription	Spleen	Spleen
6	chr5:76079000-76084200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr5:76079800-76084000	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr5:76080200-76084600	Enhancers	Fetal Intestine Large	intestine
9	chr5:76080400-76086800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
10	chr5:76080600-76086800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr5:76080800-76085800	Weak transcription	Small Intestine	intestine
12	chr5:76080800-76086600	Weak transcription	Colonic Mucosa	Colon
13	chr5:76081600-76088800	Enhancers	Stomach Mucosa	stomach
14	chr5:76081800-76084200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
15	chr5:76081800-76085400	Weak transcription	NHEK	skin
16	chr5:76081800-76085600	Weak transcription	HUES6 Cell Line	embryonic stem cell
17	chr5:76081800-76086200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr5:76082000-76085400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
19	chr5:76082000-76085600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr5:76082200-76083600	Weak transcription	Pancreas	Pancrea
21	chr5:76082200-76084200	Weak transcription	Rectal Mucosa Donor 29	rectum
22	chr5:76082600-76083600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr5:76082600-76084400	Enhancers	NH-A	brain
24	chr5:76082600-76084600	Enhancers	Fetal Intestine Small	intestine
25	chr5:76082800-76083400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr5:76082800-76083600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
27	chr5:76082800-76083800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr5:76082800-76083800	Enhancers	NHDF-Ad	bronchial
29	chr5:76082800-76084400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr5:76082800-76084400	Enhancers	Fetal Muscle Leg	muscle
31	chr5:76082800-76084400	Enhancers	HepG2	liver
32	chr5:76082800-76084400	Enhancers	Osteobl	bone
33	chr5:76082800-76084600	Enhancers	Duodenum Mucosa	Duodenum
34	chr5:76082800-76084600	Enhancers	Hela-S3	cervix
35	chr5:76082800-76084800	Enhancers	NHLF	lung
36	chr5:76083000-76083400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr5:76083000-76083400	Enhancers	HUES64 Cell Line	embryonic stem cell
38	chr5:76083000-76083400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
39	chr5:76083000-76083400	Enhancers	Placenta Amnion	Placenta Amnion
40	chr5:76083000-76083400	Flanking Active TSS	A549	lung
41	chr5:76083000-76083400	Enhancers	HMEC	breast
42	chr5:76083000-76083400	Enhancers	HSMM	muscle
43	chr5:76083000-76083600	Enhancers	H1 Cell Line	embryonic stem cell
44	chr5:76083000-76083600	Enhancers	Muscle Satellite Cultured Cells	--
45	chr5:76083000-76083600	Enhancers	Cortex derived primary cultured neurospheres	brain
46	chr5:76083000-76083600	Enhancers	Adipose Nuclei	Adipose
47	chr5:76083000-76083600	Enhancers	Fetal Lung	lung
48	chr5:76083000-76083600	Enhancers	K562	blood
49	chr5:76083000-76084400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
50	chr5:76083000-76084400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links