The 2.0 version of rSNPBase

Variant report

Variant esv2763927
Chromosome Location chr5:177132443-177260330
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:177137400-177142000 Weak transcription Primary T helper naive cells fromperipheralblood blood
2 chr5:177139400-177150800 Weak transcription Primary T helper cells fromperipheralblood blood
3 chr5:177142200-177143000 Enhancers NHEK skin
4 chr5:177142400-177142800 Enhancers HMEC breast
5 chr5:177142400-177143000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr5:177151000-177151200 Enhancers Primary T helper cells fromperipheralblood blood
7 chr5:177151000-177151600 Enhancers Primary B cells from peripheral blood blood
8 chr5:177163400-177167600 Weak transcription Primary T helper naive cells fromperipheralblood blood
9 chr5:177188000-177188400 Enhancers K562 blood
10 chr5:177190800-177191800 Enhancers Fetal Muscle Leg muscle
11 chr5:177209000-177209800 Active TSS Primary T helper cells PMA-I stimulated --
12 chr5:177209400-177209600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
13 chr5:177209400-177209600 Enhancers Pancreas Pancrea
14 chr5:177209400-177209800 Enhancers Primary T helper 17 cells PMA-I stimulated --
15 chr5:177209400-177209800 Bivalent/Poised TSS Fetal Adrenal Gland Adrenal Gland
16 chr5:177209400-177210200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr5:177209400-177210400 Active TSS Primary T helper naive cells fromperipheralblood blood
18 chr5:177209400-177210400 Active TSS Primary T regulatory cells fromperipheralblood blood
19 chr5:177209400-177210600 Active TSS Ovary ovary
20 chr5:177209600-177209800 Bivalent Enhancer Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr5:177209600-177209800 Bivalent Enhancer Fetal Muscle Trunk muscle
22 chr5:177209600-177210400 Active TSS Primary T cells fromperipheralblood blood
23 chr5:177209800-177210400 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
24 chr5:177210000-177210400 Active TSS Brain Angular Gyrus brain
25 chr5:177210000-177210600 Bivalent/Poised TSS Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr5:177218400-177218600 Enhancers Primary T helper naive cells fromperipheralblood blood
27 chr5:177218600-177220800 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr5:177220800-177222400 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr5:177221400-177221800 Enhancers Primary T helper naive cells from peripheral blood blood
30 chr5:177221400-177221800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
31 chr5:177221400-177221800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
32 chr5:177221400-177221800 Enhancers Primary T killer memory cells from peripheral blood blood
33 chr5:177221400-177222600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
34 chr5:177221400-177222600 Enhancers Primary T helper cells PMA-I stimulated --
35 chr5:177221400-177222800 Enhancers Primary T helper 17 cells PMA-I stimulated --
36 chr5:177221600-177222000 Enhancers Primary T cells fromperipheralblood blood
37 chr5:177221800-177235600 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr5:177222000-177222400 Weak transcription Primary T cells fromperipheralblood blood
39 chr5:177222400-177222600 Enhancers Primary T cells fromperipheralblood blood
40 chr5:177222400-177230400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr5:177222600-177226400 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr5:177222600-177227400 Weak transcription Primary T cells fromperipheralblood blood
43 chr5:177222800-177225400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
44 chr5:177226000-177227200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
45 chr5:177227400-177227800 Enhancers Primary T cells fromperipheralblood blood
46 chr5:177227800-177229000 Weak transcription Primary T cells fromperipheralblood blood
47 chr5:177228600-177229600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr5:177229000-177229400 Enhancers Primary T cells fromperipheralblood blood
49 chr5:177229400-177234200 Weak transcription Primary T cells fromperipheralblood blood
50 chr5:177230400-177231000 Enhancers Primary T helper naive cells fromperipheralblood blood

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Last update: Aug 31, 2015