Variant report

Variant	esv2829984
Chromosome Location	chr13:64412839-64517258
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:234)
CpG islands
(count:549)
Chromatin interactive
region (count:6)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:234 , 50 per page) page: 1 2 3 4 5

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr13:64429710-64430077	HepG2	liver:	n/a	n/a
2	CEBPB	chr13:64494229-64494429	HepG2	liver:	n/a	chr13:64494372-64494383
3	CEBPB	chr13:64514442-64514720	Hela-S3	cervix:	n/a	chr13:64514540-64514551 chr13:64514541-64514550 chr13:64514539-64514552 chr13:64514539-64514550
4	CEBPB	chr13:64516525-64516869	Hela-S3	cervix:	n/a	chr13:64516700-64516711
5	CEBPB	chr13:64422818-64422949	HepG2	liver:	n/a	n/a
6	CEBPB	chr13:64514382-64514695	HepG2	liver:	n/a	chr13:64514540-64514551 chr13:64514541-64514550 chr13:64514539-64514552 chr13:64514539-64514550
7	CEBPB	chr13:64429868-64430208	IMR90	lung:	n/a	n/a
8	CEBPB	chr13:64516532-64516875	HepG2	liver:	n/a	chr13:64516700-64516711
9	CEBPB	chr13:64513029-64513299	IMR90	lung:	n/a	n/a
10	CEBPB	chr13:64514357-64514711	IMR90	lung:	n/a	chr13:64514540-64514551 chr13:64514541-64514550 chr13:64514539-64514552 chr13:64514539-64514550
11	CEBPB	chr13:64516563-64516880	ECC-1	luminal epithelium:	n/a	chr13:64516700-64516711
12	CEBPB	chr13:64516546-64516827	A549	lung:	n/a	chr13:64516700-64516711
13	CEBPB	chr13:64516511-64516897	IMR90	lung:	n/a	chr13:64516700-64516711
14	CEBPB	chr13:64438331-64438697	IMR90	lung:	n/a	n/a
15	CEBPB	chr13:64438259-64438697	Hela-S3	cervix:	n/a	n/a
16	CEBPB	chr13:64438348-64438617	HepG2	liver:	n/a	n/a
17	CEBPB	chr13:64438372-64438635	A549	lung:	n/a	n/a
18	CEBPB	chr13:64461878-64462200	HepG2	liver:	n/a	chr13:64462014-64462025
19	CTCF	chr13:64515846-64515901	H1-hESC	embryonic stem cell:	n/a	n/a
20	CTCF	chr13:64475840-64475990	WERI-Rb-1	eye:	n/a	n/a
21	CTCF	chr13:64475893-64476033	MCF-7	breast:	n/a	n/a
22	CTCF	chr13:64475902-64476011	MCF-7	breast:	n/a	n/a
23	CTCF	chr13:64475911-64476006	MCF-7	breast:	n/a	n/a
24	CTCF	chr13:64424268-64424335	LNCaP	prostate:	n/a	n/a
25	CTCF	chr13:64415903-64415950	LNCaP	prostate:	n/a	n/a
26	CTCF	chr13:64475874-64476050	Hela-S3	cervix:	n/a	n/a
27	CTCF	chr13:64434437-64434500	Lung_OC	lung:	n/a	n/a
28	CTCF	chr13:64424240-64424295	MCF-7	breast:	n/a	n/a
29	CTCF	chr13:64475880-64476030	Hela-S3	cervix:	n/a	n/a
30	CTCF	chr13:64483376-64483395	Medullo	brain:	n/a	n/a
31	CTCF	chr13:64475900-64476050	HepG2	liver:	n/a	n/a
32	CTCF	chr13:64475886-64476039	A549	lung:	n/a	n/a
33	CTCF	chr13:64475893-64476039	HepG2	liver:	n/a	n/a
34	CTCF	chr13:64455160-64455310	GM12869	blood:	n/a	n/a
35	CTCF	chr13:64475800-64475950	NB4	blood:	n/a	n/a
36	CTCF	chr13:64475839-64476035	HepG2	liver:	n/a	n/a
37	CTCF	chr13:64475860-64476010	HCPEpiC	choroid plexus:	n/a	n/a
38	CTCF	chr13:64475860-64476010	Caco-2	colon:	n/a	n/a
39	CTCF	chr13:64475840-64475990	HepG2	liver:	n/a	n/a
40	CTCF	chr13:64475885-64476012	K562	blood:	n/a	n/a
41	CTCF	chr13:64475919-64476031	H1-hESC	embryonic stem cell:	n/a	n/a
42	CTCF	chr13:64424253-64424277	LNCaP	prostate:	n/a	n/a
43	CTCF	chr13:64517240-64517390	HPF	lung:	n/a	n/a
44	CTCF	chr13:64475864-64476050	MCF-7	breast:	n/a	n/a
45	CTCF	chr13:64475935-64476036	Medullo	brain:	n/a	n/a
46	CTCF	chr13:64475829-64476122	GM12878	blood:	n/a	n/a
47	CTCF	chr13:64424222-64424277	Hela-S3	cervix:	n/a	n/a
48	CTCF	chr13:64475860-64476010	BE2_C	brain:	n/a	n/a
49	CTCF	chr13:64424244-64424338	MCF-7	breast:	n/a	n/a
50	CTCF	chr13:64475886-64476030	MCF-7	breast:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr13:64416816-64416866	GM12892	blood:	n/a
2	chr13:64421835-64421885	HPAEpiC	pulmonary alveolar:	n/a
3	chr13:64418345-64418395	HL-60	blood:	n/a
4	chr13:64418337-64418387	HRE	kidney:	n/a
5	chr13:64418279-64418329	CMK	blood:	n/a
6	chr13:64418279-64418329	NHBE	bronchial:	n/a
7	chr13:64418678-64418728	MCF-7	breast:	n/a
8	chr13:64516824-64516874	HNPCEpiC	eye:	n/a
9	chr13:64418337-64418387	AG10803	skin:	n/a
10	chr13:64418337-64418387	MCF10A-Er-Src	breast:	n/a
11	chr13:64418337-64418387	K562	blood:	n/a
12	chr13:64421835-64421885	NHDF-neo	bronchial:	n/a
13	chr13:64516824-64516874	HRPEpiC	eye:	n/a
14	chr13:64418345-64418395	HCT-116	colon:	n/a
15	chr13:64418279-64418329	ProgFib	skin:	n/a
16	chr13:64416816-64416866	SAEC	small airway:	n/a
17	chr13:64421835-64421885	AG09309	skin:	n/a
18	chr13:64415303-64415353	ovcar-3	ovarian:	n/a
19	chr13:64418279-64418329	RPTEC	kidney:	n/a
20	chr13:64418345-64418395	RPTEC	kidney:	n/a
21	chr13:64418678-64418728	HEEpiC	esophagus:	n/a
22	chr13:64418337-64418387	AG04449	skin:	fetal
23	chr13:64416816-64416866	NHBE	bronchial:	n/a
24	chr13:64418676-64418726	IMR90	lung:	fetal
25	chr13:64418279-64418329	SK-N-MC	brain:	n/a
26	chr13:64415303-64415353	HMEC	breast:	n/a
27	chr13:64416816-64416866	ECC-1	luminal epithelium:	n/a
28	chr13:64418678-64418728	Caco-2	colon:	n/a
29	chr13:64416816-64416866	IMR90	lung:	fetal
30	chr13:64418279-64418329	HEK293	kidney:	embryo
31	chr13:64418678-64418728	ovcar-3	ovarian:	n/a
32	chr13:64418676-64418726	HEEpiC	esophagus:	n/a
33	chr13:64416816-64416866	HMEC	breast:	n/a
34	chr13:64418337-64418387	HIPEpiC	eye:	n/a
35	chr13:64516824-64516874	GM19239	blood:	n/a
36	chr13:64418279-64418329	HPAEpiC	pulmonary alveolar:	n/a
37	chr13:64418279-64418329	HMEC	breast:	n/a
38	chr13:64418337-64418387	BJ	skin:	n/a
39	chr13:64418345-64418395	AG04450	lung:	fetal
40	chr13:64416816-64416866	AG10803	skin:	n/a
41	chr13:64516824-64516874	HEK293	kidney:	embryo
42	chr13:64416816-64416866	AG04449	skin:	fetal
43	chr13:64418676-64418726	AG04450	lung:	fetal
44	chr13:64418345-64418395	CMK	blood:	n/a
45	chr13:64416816-64416866	NB4	blood:	n/a
46	chr13:64416816-64416866	RPTEC	kidney:	n/a
47	chr13:64418337-64418387	Hepatocyte	liver:	n/a
48	chr13:64418678-64418728	AG09319	gingival:	n/a
49	chr13:64418678-64418728	PANC-1	pancreas:	n/a
50	chr13:64418345-64418395	HNPCEpiC	eye:	n/a

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr13:64478683..64481675-chr13:64487598..64489103,2	MCF-7	breast:
2	chr13:64461452..64464035-chr13:64465171..64467980,2	K562	blood:
3	chr11:1968235..1969201-chr13:64430713..64431213,2	NB4	blood:
4	chr13:64475617..64476410-chr13:64728809..64729366,2	MCF-7	breast:
5	chr13:64461452..64464035-chr13:64465171..64467980,2	K562	blood:
6	chr13:64478683..64481675-chr13:64487598..64489103,2	MCF-7	breast:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PCDH20-10	chr13:64412293-64412877	NONHSAT034185
2	lnc-PCDH20-10	chr13:64413882-64414219	NONHSAT034181
3	lnc-PCDH20-10	chr13:64413203-64413330	NONHSAT034187

No data

Variant related genes	Relation type
ENSG00000219926	TF binding region
ENSG00000272299	TF binding region
ENSG00000219926	CpG island
ENSG00000272299	CpG island
ENSG00000214026	chromatin interactions

Extended variants
information (count: 1396 )
Associated
traits (count: 97 )

Variant overlapped rSNPs/rCNVs (count:1396 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4635218	chr13:64412839-64412840	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
2	rs537527249	chr13:64412848-64412849	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
3	rs576055491	chr13:64412863-64412864	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
4	rs144504531	chr13:64412868-64412869	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
5	rs35868560	chr13:64412875-64412876	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
6	rs57332583	chr13:64412876-64412877	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
7	rs397761056	chr13:64412877-64412878	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
8	rs531699706	chr13:64413209-64413210	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
9	rs550020160	chr13:64413213-64413214	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
10	rs562194400	chr13:64413214-64413215	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
11	rs111515353	chr13:64413228-64413229	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
12	rs146373091	chr13:64413231-64413232	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
13	rs181872057	chr13:64413254-64413255	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
14	rs565680704	chr13:64413262-64413263	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
15	rs539360429	chr13:64413263-64413264	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
16	rs551215669	chr13:64413269-64413270	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
17	rs375956602	chr13:64413275-64413276	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
18	rs569572743	chr13:64413291-64413292	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
19	rs111556974	chr13:64413292-64413293	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
20	rs2635991	chr13:64413296-64413297	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs377536976	chr13:64413315-64413316	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
22	rs371187787	chr13:64413317-64413318	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
23	rs74090299	chr13:64413318-64413319	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs2635989	chr13:64413891-64413892	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
25	rs563500210	chr13:64413903-64413904	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
26	rs543380053	chr13:64413919-64413920	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
27	rs560265095	chr13:64413933-64413934	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
28	rs377372219	chr13:64413934-64413935	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
29	rs542920244	chr13:64413935-64413936	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
30	rs376698381	chr13:64413939-64413940	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
31	rs9564124	chr13:64413947-64413948	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs549016574	chr13:64413956-64413957	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
33	rs562396669	chr13:64413957-64413958	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
34	rs34821227	chr13:64413959-64413960	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
35	rs184977551	chr13:64413963-64413964	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
36	rs74090904	chr13:64413964-64413965	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs189639735	chr13:64413969-64413970	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
38	rs549301824	chr13:64413975-64413976	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
39	rs567598750	chr13:64413977-64413978	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
40	rs181315887	chr13:64413984-64413985	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
41	rs571042012	chr13:64413986-64413987	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
42	rs552957611	chr13:64413995-64413996	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
43	rs577567149	chr13:64413997-64413998	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
44	rs147427757	chr13:64414003-64414004	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
45	rs139684059	chr13:64414004-64414005	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
46	rs7984723	chr13:64414033-64414034	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs7983297	chr13:64414038-64414039	Inactive region	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs112863537	chr13:64414044-64414045	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
49	rs149690577	chr13:64414049-64414050	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
50	rs540494906	chr13:64414054-64414055	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:97)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
HIV/AIDS	22032296	CNVD
Prostate cancer	16705090	CNVD
High-proliferative meningiomas	17937814	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Intellectual disability	22102821	CNVD
Cancer	20164919	CNVD
Autism	22495311	CNVD
Chordoma	21602918	CNVD
Bladder cancer	21949216	CNVD
Acute myeloid leukemia	16864856	CNVD
Burkitt''s lymphoma	18698080	CNVD
Cancer	21637783	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	21518781	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Colorectal cancer	20709793	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Ovarian cancer	20844748	CNVD
Colorectal cancer	19359472	CNVD
Intracranial aneurysm	19064780	CNVD
Breast cancer	19287154	CNVD
Acute myeloid leukemia	18379011	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Multiple myeloma	17077331	CNVD
Ependymoma	16718352	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Colorectal cancer	16272173	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Squamous cell cancer	20885788	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Thyroid cancer	19087340	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	16608533	CNVD
Neuroblastoma	18923191	CNVD
Ovarian cancer	22174824	CNVD
Breast cancer	17133270	CNVD
Myoepithelioma	18604193	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Prostate cancer	16573809	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Paraganglioma	21461997	CNVD
Pheochromocytoma	21461997	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Prostate cancer	17245344	CNVD
Prostate cancer	18632612	CNVD
Colorectal cancer	21586687	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Retinoblastoma	19183342	CNVD
Developmental delay	21147756	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Merkel cell carcinoma	19020549	CNVD
Basal cell lymphoma	17053054	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
lymphocytic leukemia	21291569	CNVD
Multiple myeloma	17550852	CNVD
Breast cancer	21858162	CNVD
Glioblastoma multiforme	21922591	CNVD
Metanephric adenoma	20802469	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Gastric cancer	17908304	CNVD
Glioblastoma multiforme	21750150	CNVD
Breast cancer	17603634	CNVD
Cancer	21183584	CNVD
Breast cancer	17393978	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Liposarcoma	21253554	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
Colorectal cancer	16774939	CNVD
Adenoid cystic carcinoma	17372589	CNVD
abnormal development	18461090	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD
Melanoma	20688739	CNVD

Chromatin state (count:58 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:64415000-64415200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr13:64415000-64415600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr13:64415000-64415600	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
4	chr13:64415200-64415400	ZNF genes & repeats	Foreskin Melanocyte Primary Cells skin01	Skin
5	chr13:64415200-64415600	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr13:64415600-64418200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
7	chr13:64415600-64419000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr13:64418200-64418600	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr13:64418600-64420400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr13:64422200-64423000	Enhancers	Fetal Lung	lung
11	chr13:64422400-64423200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
12	chr13:64429400-64430200	Enhancers	HepG2	liver
13	chr13:64429600-64429800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr13:64429600-64430000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr13:64430000-64431000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr13:64430000-64431600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr13:64430000-64436000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
18	chr13:64431000-64433200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
19	chr13:64431600-64432400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr13:64432400-64438600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr13:64433200-64438800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr13:64434000-64434400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
23	chr13:64434200-64434600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr13:64434400-64434800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
25	chr13:64434600-64436000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr13:64438600-64440000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
27	chr13:64438800-64440200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
28	chr13:64479800-64480200	Active TSS	Aorta	Aorta
29	chr13:64483400-64484400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
30	chr13:64483800-64485400	Enhancers	Cortex derived primary cultured neurospheres	brain
31	chr13:64484000-64485400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr13:64484200-64485000	Enhancers	Fetal Muscle Leg	muscle
33	chr13:64484200-64485400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
34	chr13:64484400-64484600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
35	chr13:64484600-64484800	Active TSS	Brain Anterior Caudate	brain
36	chr13:64484600-64484800	Active TSS	Brain Cingulate Gyrus	brain
37	chr13:64484600-64485000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr13:64484600-64485000	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
39	chr13:64484600-64485000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr13:64484600-64485000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
41	chr13:64484600-64485000	Enhancers	Fetal Brain Male	brain
42	chr13:64484800-64485000	Flanking Active TSS	Brain Anterior Caudate	brain
43	chr13:64484800-64485000	Flanking Active TSS	Brain Cingulate Gyrus	brain
44	chr13:64485000-64485200	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr13:64485200-64485400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
46	chr13:64494000-64494200	Enhancers	Gastric	stomach
47	chr13:64503000-64503400	Enhancers	Fetal Heart	heart
48	chr13:64512800-64513600	Enhancers	Muscle Satellite Cultured Cells	--
49	chr13:64513600-64516600	Weak transcription	Muscle Satellite Cultured Cells	--
50	chr13:64515800-64516000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links