Variant report

Variant	esv3319020
Chromosome Location	chr19:21268262-21336383
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:808)
CpG islands
(count:732)
Chromatin interactive
region (count:23)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:808 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:21317764-21318041	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:21310732-21311042	K562	blood:	n/a	n/a
3	ARID3A	chr19:21324511-21325033	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:21309568-21309872	K562	blood:	n/a	n/a
5	ARID3A	chr19:21334536-21334657	HepG2	liver:	n/a	n/a
6	ARID3A	chr19:21320974-21321431	HepG2	liver:	n/a	n/a
7	ARID3A	chr19:21311642-21311836	K562	blood:	n/a	n/a
8	ARID3A	chr19:21324594-21324991	K562	blood:	n/a	n/a
9	ARID3A	chr19:21298266-21298592	K562	blood:	n/a	n/a
10	ARID3A	chr19:21326481-21326923	K562	blood:	n/a	n/a
11	ATF1	chr19:21311655-21311901	K562	blood:	n/a	n/a
12	ATF1	chr19:21323783-21324152	K562	blood:	n/a	n/a
13	ATF1	chr19:21324532-21324958	K562	blood:	n/a	n/a
14	ATF1	chr19:21309871-21310055	K562	blood:	n/a	n/a
15	BACH1	chr19:21334389-21334437	K562	blood:	n/a	n/a
16	BATF	chr19:21284333-21284518	GM12878	blood:	n/a	chr19:21284437-21284448
17	BATF	chr19:21284292-21284552	GM12878	blood:	n/a	chr19:21284437-21284448
18	BHLHE40	chr19:21324647-21325001	GM12878	blood:	n/a	n/a
19	BHLHE40	chr19:21325755-21325765	K562	blood:	n/a	n/a
20	BHLHE40	chr19:21324578-21325040	K562	blood:	n/a	n/a
21	BHLHE40	chr19:21277600-21277808	GM12878	blood:	n/a	n/a
22	CBX3	chr19:21324429-21325106	K562	blood:	n/a	n/a
23	CBX3	chr19:21313134-21313546	K562	blood:	n/a	n/a
24	CBX3	chr19:21317713-21318138	K562	blood:	n/a	n/a
25	CBX3	chr19:21313141-21313522	K562	blood:	n/a	n/a
26	CBX3	chr19:21311545-21312525	K562	blood:	n/a	n/a
27	CCNT2	chr19:21311599-21311941	K562	blood:	n/a	n/a
28	CCNT2	chr19:21298323-21298579	K562	blood:	n/a	n/a
29	CCNT2	chr19:21324680-21324880	K562	blood:	n/a	n/a
30	CEBPB	chr19:21330144-21330361	K562	blood:	n/a	chr19:21330243-21330254
31	CEBPB	chr19:21287289-21287319	K562	blood:	n/a	n/a
32	CEBPB	chr19:21277976-21278043	K562	blood:	n/a	n/a
33	CEBPB	chr19:21324525-21324869	K562	blood:	n/a	n/a
34	CEBPB	chr19:21324607-21324698	H1-hESC	embryonic stem cell:	n/a	n/a
35	CEBPB	chr19:21279665-21279786	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr19:21309819-21310094	K562	blood:	n/a	n/a
37	CEBPB	chr19:21324542-21325274	Hela-S3	cervix:	n/a	n/a
38	CEBPB	chr19:21324597-21324775	A549	lung:	n/a	n/a
39	CEBPB	chr19:21330138-21330368	IMR90	lung:	n/a	chr19:21330243-21330254
40	CEBPB	chr19:21309862-21309933	K562	blood:	n/a	n/a
41	CEBPB	chr19:21324595-21324879	HepG2	liver:	n/a	n/a
42	CEBPB	chr19:21324616-21324713	HepG2	liver:	n/a	n/a
43	CEBPB	chr19:21311478-21311988	K562	blood:	n/a	n/a
44	CEBPB	chr19:21330247-21330280	HepG2	liver:	n/a	n/a
45	CEBPB	chr19:21287270-21287272	H1-hESC	embryonic stem cell:	n/a	n/a
46	CEBPB	chr19:21311395-21312007	K562	blood:	n/a	n/a
47	CEBPB	chr19:21317815-21318034	K562	blood:	n/a	n/a
48	CEBPB	chr19:21326562-21327122	Hela-S3	cervix:	n/a	n/a
49	CEBPD	chr19:21324601-21324988	K562	blood:	n/a	n/a
50	CEBPD	chr19:21309879-21310167	K562	blood:	n/a	n/a

(count:732 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:21324782-21324832	NT2-D1	testis:	n/a
2	chr19:21324707-21324757	PANC-1	pancreas:	n/a
3	chr19:21325005-21325055	HEEpiC	esophagus:	n/a
4	chr19:21324130-21324180	SK-N-SH_RA	brain:	n/a
5	chr19:21324782-21324832	NHBE	bronchial:	n/a
6	chr19:21325005-21325055	Hepatocyte	liver:	n/a
7	chr19:21324782-21324832	CMK	blood:	n/a
8	chr19:21323534-21323584	BJ	skin:	n/a
9	chr19:21305635-21305685	NHBE	bronchial:	n/a
10	chr19:21324807-21324857	SK-N-SH	brain:	n/a
11	chr19:21323534-21323584	HCPEpiC	choroid plexus:	n/a
12	chr19:21324833-21324883	ProgFib	skin:	n/a
13	chr19:21324807-21324857	U87	brain:	n/a
14	chr19:21324444-21324494	BJ	skin:	n/a
15	chr19:21269097-21269147	NH-A	brain:	n/a
16	chr19:21324750-21324800	NH-A	brain:	n/a
17	chr19:21324130-21324180	HepG2	liver:	n/a
18	chr19:21323534-21323584	HCM	heart:	n/a
19	chr19:21325005-21325055	Caco-2	colon:	n/a
20	chr19:21324796-21324846	ECC-1	luminal epithelium:	n/a
21	chr19:21324807-21324857	HRE	kidney:	n/a
22	chr19:21305635-21305685	BE2_C	brain:	n/a
23	chr19:21324807-21324857	HPAEpiC	pulmonary alveolar:	n/a
24	chr19:21324782-21324832	GM12891	blood:	n/a
25	chr19:21324782-21324832	U87	brain:	n/a
26	chr19:21325005-21325055	LNCaP	prostate:	n/a
27	chr19:21324833-21324883	HCPEpiC	choroid plexus:	n/a
28	chr19:21324444-21324494	AoSMC	blood vessel:	n/a
29	chr19:21269097-21269147	HEEpiC	esophagus:	n/a
30	chr19:21324130-21324180	AG09309	skin:	n/a
31	chr19:21324750-21324800	HEK293	kidney:	embryo
32	chr19:21324796-21324846	MCF10A-Er-Src	breast:	n/a
33	chr19:21324807-21324857	HCT-116	colon:	n/a
34	chr19:21324707-21324757	NT2-D1	testis:	n/a
35	chr19:21324444-21324494	AG10803	skin:	n/a
36	chr19:21323534-21323584	ovcar-3	ovarian:	n/a
37	chr19:21323534-21323584	HEEpiC	esophagus:	n/a
38	chr19:21324130-21324180	IMR90	lung:	fetal
39	chr19:21324782-21324832	ProgFib	skin:	n/a
40	chr19:21269097-21269147	GM19239	blood:	n/a
41	chr19:21324833-21324883	T-47D	breast:	n/a
42	chr19:21324782-21324832	HAEpiC	amniotic membrane:	n/a
43	chr19:21325005-21325055	PrEC	prostate:	n/a
44	chr19:21305635-21305685	HMEC	breast:	n/a
45	chr19:21324782-21324832	HCPEpiC	choroid plexus:	n/a
46	chr19:21324782-21324832	HCT-116	colon:	n/a
47	chr19:21324130-21324180	ovcar-3	ovarian:	n/a
48	chr19:21324444-21324494	HCT-116	colon:	n/a
49	chr19:21269097-21269147	T-47D	breast:	n/a
50	chr19:21269097-21269147	SK-N-SH_RA	brain:	n/a

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:21276747..21278755-chr19:21280292..21281905,2	K562	blood:
2	chr19:21264288..21266539-chr19:21271478..21272991,2	MCF-7	breast:
3	chr19:21324747..21325334-chr19:21541551..21542092,2	Hela-S3	cervix:
4	chr19:21268071..21270842-chr19:21283139..21285114,2	K562	blood:
5	chr19:21329795..21332186-chr19:21344748..21346568,2	K562	blood:
6	chr19:21328122..21331831-chr19:21332882..21335579,3	K562	blood:
7	chr19:21266339..21268600-chr19:21281169..21284066,2	MCF-7	breast:
8	chr19:21264016..21266575-chr19:21326485..21328797,2	MCF-7	breast:
9	chr19:21267358..21270716-chr19:21272495..21275149,3	MCF-7	breast:
10	chr19:21263410..21266735-chr19:21269462..21274138,5	K562	blood:
11	chr19:21325138..21326653-chr19:21327405..21328910,2	K562	blood:
12	chr19:21319136..21321232-chr19:21323817..21326389,2	K562	blood:
13	chr19:21324608..21326238-chr19:21328530..21331210,2	MCF-7	breast:
14	chr19:21276747..21278755-chr19:21280292..21281905,2	K562	blood:
15	chr19:21325138..21326653-chr19:21327405..21328910,2	K562	blood:
16	chr14:39639460..39640068-chr19:21325033..21325860,2	Hela-S3	cervix:
17	chr19:21327774..21330342-chr19:21332349..21334379,2	MCF-7	breast:
18	chr19:21268213..21268800-chr19:21327512..21328424,2	MCF-7	breast:
19	chr19:21267358..21270716-chr19:21272495..21275149,3	MCF-7	breast:
20	chr19:21312896..21314771-chr19:21323680..21326350,2	K562	blood:
21	chr19:21264764..21267719-chr19:21267936..21273188,6	K562	blood:
22	chr19:21268071..21270842-chr19:21283139..21285114,2	K562	blood:
23	chr19:21268213..21268800-chr19:21327512..21328424,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF714-2	chr19:21306620-21306991	NONHSAT063687
2	lnc-ZNF431-3	chr19:21301321-21301529	NONHSAT063686
3	lnc-ZNF714-1	chr19:21307764-21307881	NONHSAT063683
4	lnc-ZNF430-2	chr19:21273717-21274564	NONHSAT063684

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	ZNF714	hsa-miR-222-3p	chr19:21304966-21304986

Variant related genes	Relation type
VN1R81P	TF binding region
ZNF431	TF binding region
RNA5SP469	TF binding region
ENSG00000256240	TF binding region
RPL7AP10	TF binding region
VN1R81P	CpG island
ZNF431	CpG island
RNA5SP469	CpG island
ENSG00000256240	CpG island
RPL7AP10	CpG island
ENSG00000196705	chromatin interactions
ENSG00000240522	chromatin interactions
ENSG00000182400	chromatin interactions
ENSG00000160352	chromatin interactions
ENSG00000172687	chromatin interactions

Extended variants
information (count: 2681 )
Associated
traits (count: 41 )

Variant overlapped rSNPs/rCNVs (count:2681 , 50 per page) page: 1 2 3 4 5 6 7 ... 54

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs79668334	chr19:21268267-21268268	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs73020647	chr19:21268273-21268274	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs73020648	chr19:21268301-21268302	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs73926922	chr19:21268316-21268317	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs376373622	chr19:21268350-21268351	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs116873021	chr19:21268351-21268352	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs552747649	chr19:21268358-21268359	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs201089687	chr19:21268359-21268360	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs572887002	chr19:21268376-21268377	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs199663336	chr19:21268390-21268391	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs572320229	chr19:21268394-21268395	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs555326638	chr19:21268399-21268400	Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs369528369	chr19:21268403-21268404	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs62122638	chr19:21268409-21268410	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs62122639	chr19:21268412-21268413	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs62122640	chr19:21268452-21268453	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs62122641	chr19:21268458-21268459	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs62122642	chr19:21268462-21268463	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs138422829	chr19:21268486-21268487	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs543744526	chr19:21268519-21268520	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs563949430	chr19:21268529-21268530	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs572248016	chr19:21268547-21268548	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs2013048	chr19:21268559-21268560	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs138725137	chr19:21268600-21268601	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs531301894	chr19:21268660-21268661	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs369396589	chr19:21268685-21268686	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs34378470	chr19:21268687-21268688	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs148688297	chr19:21268688-21268689	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs201469813	chr19:21268702-21268703	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs371520874	chr19:21268705-21268706	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs559550828	chr19:21268776-21268777	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs73535716	chr19:21268792-21268793	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs567194525	chr19:21268801-21268802	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs529425545	chr19:21268802-21268803	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs543016178	chr19:21268816-21268817	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs186898936	chr19:21268827-21268828	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs561731012	chr19:21268871-21268872	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs531373535	chr19:21268937-21268938	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs142674701	chr19:21268940-21268941	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs550596383	chr19:21268989-21268990	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs570630564	chr19:21269070-21269071	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs377412361	chr19:21269207-21269208	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs553442865	chr19:21269271-21269272	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs144449325	chr19:21269336-21269337	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs148578057	chr19:21269339-21269340	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs191439581	chr19:21269351-21269352	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs566544807	chr19:21269359-21269360	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs535523982	chr19:21269371-21269372	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs375676528	chr19:21269380-21269381	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs8109504	chr19:21269382-21269383	Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a

Variant related diseases (count:41)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
small cell lung cancer	20016488	CNVD
Ductal carcinoma	22052326	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Melanoma	20877625	CNVD

Chromatin state (count:1985 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:21247400-21289600	Weak transcription	Aorta	Aorta
2	chr19:21265400-21268400	Weak transcription	Spleen	Spleen
3	chr19:21265400-21274800	Weak transcription	Lung	lung
4	chr19:21265600-21273400	Weak transcription	Left Ventricle	heart
5	chr19:21265600-21273800	Weak transcription	Esophagus	oesophagus
6	chr19:21265600-21275000	Weak transcription	Pancreas	Pancrea
7	chr19:21265600-21286400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr19:21265600-21295800	Weak transcription	Small Intestine	intestine
9	chr19:21265600-21300000	Weak transcription	Brain Angular Gyrus	brain
10	chr19:21265600-21305200	Weak transcription	Psoas Muscle	Psoas
11	chr19:21265800-21268400	Weak transcription	Primary T helper naive cells from peripheral blood	blood
12	chr19:21265800-21268800	Weak transcription	Placenta	Placenta
13	chr19:21265800-21270000	Weak transcription	NHLF	lung
14	chr19:21265800-21275000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr19:21265800-21275000	Weak transcription	Primary B cells from cord blood	blood
16	chr19:21265800-21275000	Weak transcription	Placenta Amnion	Placenta Amnion
17	chr19:21265800-21275400	Weak transcription	Brain Hippocampus Middle	brain
18	chr19:21265800-21282600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
19	chr19:21265800-21289800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr19:21265800-21290600	Weak transcription	Adipose Nuclei	Adipose
21	chr19:21265800-21297200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
22	chr19:21265800-21297200	Weak transcription	Brain Cingulate Gyrus	brain
23	chr19:21265800-21299600	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr19:21265800-21299800	Weak transcription	Skeletal Muscle Female	skeletal muscle
25	chr19:21265800-21302200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
26	chr19:21265800-21302800	Weak transcription	Fetal Muscle Trunk	muscle
27	chr19:21265800-21303000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
28	chr19:21266000-21269400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
29	chr19:21266000-21269600	Weak transcription	NH-A	brain
30	chr19:21266000-21271600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr19:21266000-21274000	Weak transcription	Duodenum Smooth Muscle	Duodenum
32	chr19:21266000-21275000	Weak transcription	Fetal Heart	heart
33	chr19:21266000-21276400	Weak transcription	Fetal Intestine Small	intestine
34	chr19:21266000-21278800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr19:21266000-21286000	Weak transcription	H9 Cell Line	embryonic stem cell
36	chr19:21266000-21287600	Weak transcription	Primary T helper cells fromperipheralblood	blood
37	chr19:21266000-21287800	Weak transcription	Duodenum Mucosa	Duodenum
38	chr19:21266000-21288400	Weak transcription	Primary neutrophils fromperipheralblood	blood
39	chr19:21266000-21289400	Weak transcription	Primary hematopoietic stem cells	blood
40	chr19:21266000-21290800	Weak transcription	Brain Anterior Caudate	brain
41	chr19:21266000-21290800	Weak transcription	Rectal Mucosa Donor 29	rectum
42	chr19:21266000-21290800	Weak transcription	Rectal Mucosa Donor 31	rectum
43	chr19:21266000-21292600	Weak transcription	Fetal Kidney	kidney
44	chr19:21266000-21297400	Weak transcription	HUVEC	blood vessel
45	chr19:21266200-21269200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
46	chr19:21266200-21273400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
47	chr19:21266200-21273800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr19:21266200-21274600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
49	chr19:21266200-21274600	Weak transcription	Rectal Smooth Muscle	rectum
50	chr19:21266200-21275000	Weak transcription	Fetal Stomach	stomach

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links