Variant report

Variant	esv3319026
Chromosome Location	chr19:23955132-24242554
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3135)
CpG islands
(count:1346)
Chromatin interactive
region (count:106)
LncRNA
region (count:29)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3135 , 50 per page) page: 1 2 3 4 5 6 7 ... 63

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:24216225-24216482	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:24183498-24185658	K562	blood:	n/a	n/a
3	ARID3A	chr19:24183499-24185659	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:24237256-24237537	HepG2	liver:	n/a	n/a
5	ATF1	chr19:24183491-24185180	K562	blood:	n/a	n/a
6	ATF1	chr19:24097373-24097798	K562	blood:	n/a	n/a
7	ATF1	chr19:23958138-23958329	K562	blood:	n/a	n/a
8	ATF1	chr19:24082792-24082903	K562	blood:	n/a	n/a
9	ATF1	chr19:24006791-24007164	K562	blood:	n/a	n/a
10	ATF3	chr19:24184490-24185088	A549	lung:	n/a	n/a
11	ATF3	chr19:24184009-24184195	K562	blood:	n/a	n/a
12	ATF3	chr19:24184025-24184182	HepG2	liver:	n/a	n/a
13	ATF3	chr19:24097347-24097690	K562	blood:	n/a	n/a
14	ATF3	chr19:24183370-24183793	A549	lung:	n/a	n/a
15	ATF3	chr19:24184039-24184181	K562	blood:	n/a	n/a
16	ATF3	chr19:24183982-24184391	A549	lung:	n/a	n/a
17	ATF3	chr19:24183577-24183767	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF3	chr19:24184616-24185158	A549	lung:	n/a	n/a
19	ATF3	chr19:24183418-24183789	H1-hESC	embryonic stem cell:	n/a	n/a
20	BACH1	chr19:24183495-24184312	K562	blood:	n/a	n/a
21	BACH1	chr19:24216294-24216452	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr19:24184571-24185665	K562	blood:	n/a	n/a
23	BACH1	chr19:24000521-24000697	K562	blood:	n/a	n/a
24	BATF	chr19:23955472-23955714	GM12878	blood:	n/a	n/a
25	BATF	chr19:24184550-24184857	GM12878	blood:	n/a	n/a
26	BATF	chr19:24184007-24184218	GM12878	blood:	n/a	n/a
27	BATF	chr19:23967036-23967332	GM12878	blood:	n/a	n/a
28	BATF	chr19:23955417-23955716	GM12878	blood:	n/a	n/a
29	BATF	chr19:24237342-24237641	GM12878	blood:	n/a	n/a
30	BATF	chr19:24237294-24237770	GM12878	blood:	n/a	n/a
31	BATF	chr19:23967080-23967345	GM12878	blood:	n/a	n/a
32	BCL11A	chr19:24237418-24237685	GM12878	blood:	n/a	n/a
33	BCL11A	chr19:24183530-24183739	H1-hESC	embryonic stem cell:	n/a	n/a
34	BCL11A	chr19:24183982-24184247	GM12878	blood:	n/a	n/a
35	BCL11A	chr19:24183582-24183758	H1-hESC	embryonic stem cell:	n/a	n/a
36	BCL3	chr19:24239339-24239678	GM12878	blood:	n/a	n/a
37	BCL3	chr19:24183980-24184379	A549	lung:	n/a	n/a
38	BCL3	chr19:24184372-24184984	A549	lung:	n/a	n/a
39	BCL3	chr19:24183959-24184238	A549	lung:	n/a	n/a
40	BCL3	chr19:24183572-24183744	GM12878	blood:	n/a	n/a
41	BCLAF1	chr19:24183985-24184228	K562	blood:	n/a	n/a
42	BCLAF1	chr19:24183456-24183795	GM12878	blood:	n/a	n/a
43	BCLAF1	chr19:24184786-24185094	K562	blood:	n/a	n/a
44	BCLAF1	chr19:24183582-24183764	GM12878	blood:	n/a	n/a
45	BCLAF1	chr19:24183982-24184222	GM12878	blood:	n/a	n/a
46	BCLAF1	chr19:24183840-24184229	K562	blood:	n/a	n/a
47	BHLHE40	chr19:24184570-24186353	K562	blood:	n/a	n/a
48	BHLHE40	chr19:24216244-24216540	K562	blood:	n/a	n/a
49	BHLHE40	chr19:24210984-24211078	GM12878	blood:	n/a	n/a
50	BHLHE40	chr19:23968376-23968383	K562	blood:	n/a	n/a

(count:1346 , 50 per page) page: 1 2 3 4 5 6 7 ... 27

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:24182718-24182768	GM12891	blood:	n/a
2	chr19:24216292-24216342	NB4	blood:	n/a
3	chr19:24184851-24184901	ovcar-3	ovarian:	n/a
4	chr19:24216202-24216252	HPAEpiC	pulmonary alveolar:	n/a
5	chr19:24182718-24182768	GM12891	blood:	n/a
6	chr19:24216292-24216342	NB4	blood:	n/a
7	chr19:24184851-24184901	ovcar-3	ovarian:	n/a
8	chr19:24216202-24216252	HPAEpiC	pulmonary alveolar:	n/a
9	chr19:24184523-24184573	HRE	kidney:	n/a
10	chr19:24184660-24184710	HIPEpiC	eye:	n/a
11	chr19:24184933-24184983	AG10803	skin:	n/a
12	chr19:24182596-24182646	Caco-2	colon:	n/a
13	chr19:24154730-24154780	LNCaP	prostate:	n/a
14	chr19:24097753-24097803	GM12891	blood:	n/a
15	chr19:24182837-24182887	ProgFib	skin:	n/a
16	chr19:24152294-24152344	H1-hESC	embryonic stem cell:	embryo
17	chr19:24216202-24216252	HCM	heart:	n/a
18	chr19:24216202-24216252	U87	brain:	n/a
19	chr19:24216269-24216319	NT2-D1	testis:	n/a
20	chr19:24182596-24182646	AG04450	lung:	fetal
21	chr19:24216292-24216342	HMEC	breast:	n/a
22	chr19:24182837-24182887	HCT-116	colon:	n/a
23	chr19:24155489-24155539	HRE	kidney:	n/a
24	chr19:24182837-24182887	Caco-2	colon:	n/a
25	chr19:24152294-24152344	HMEC	breast:	n/a
26	chr19:24216202-24216252	HCT-116	colon:	n/a
27	chr19:24216269-24216319	HPAEpiC	pulmonary alveolar:	n/a
28	chr19:24216292-24216342	NH-A	brain:	n/a
29	chr19:24184753-24184803	HUVEC	blood vessel:	n/a
30	chr19:24182718-24182768	NH-A	brain:	n/a
31	chr19:24182837-24182887	AG10803	skin:	n/a
32	chr19:24184660-24184710	BE2_C	brain:	n/a
33	chr19:24184393-24184443	AG09319	gingival:	n/a
34	chr19:24154607-24154657	IMR90	lung:	fetal
35	chr19:24154607-24154657	HNPCEpiC	eye:	n/a
36	chr19:24154730-24154780	Hepatocyte	liver:	n/a
37	chr19:24154730-24154780	GM06990	blood:	n/a
38	chr19:24184550-24184600	ProgFib	skin:	n/a
39	chr19:24097753-24097803	BE2_C	brain:	n/a
40	chr19:24182688-24182738	AG09319	gingival:	n/a
41	chr19:24184523-24184573	Hepatocyte	liver:	n/a
42	chr19:24097753-24097803	GM19239	blood:	n/a
43	chr19:24216292-24216342	MCF-7	breast:	n/a
44	chr19:24154607-24154657	NHBE	bronchial:	n/a
45	chr19:24152294-24152344	Hepatocyte	liver:	n/a
46	chr19:24182837-24182887	SKMC	muscle:	n/a
47	chr19:24184660-24184710	GM06990	blood:	n/a
48	chr19:24184523-24184573	H1-hESC	embryonic stem cell:	embryo
49	chr19:24184550-24184600	AoSMC	blood vessel:	n/a
50	chr19:24216202-24216252	HMEC	breast:	n/a

(count:106 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr19:24217068..24219436-chr19:24220648..24223132,2	K562	blood:
2	chr19:24216492..24217018-chr19:24270056..24270717,2	Hela-S3	cervix:
3	chr17:33477647..33478335-chr19:24185255..24186286,3	MCF-7	breast:
4	chr19:24181292..24184068-chr19:24184818..24187065,2	MCF-7	breast:
5	chr19:24184114..24184636-chr2:133038429..133039143,2	MCF-7	breast:
6	chr16:47537629..47540663-chr19:24183251..24186106,3	MCF-7	breast:
7	chr19:23956310..23957870-chr19:23960230..23962213,2	K562	blood:
8	chr16:33963358..33967103-chr19:24184306..24187287,4	MCF-7	breast:
9	chr19:23946413..23950001-chr19:23953368..23955533,3	K562	blood:
10	chr19:23956310..23957870-chr19:23960230..23962213,2	K562	blood:
11	chr19:24184130..24184632-chr4:70296678..70297183,2	MCF-7	breast:
12	chr19:23598116..23599107-chr19:24216116..24216947,3	MCF-7	breast:
13	chr19:24127186..24129970-chr19:24140101..24141968,2	K562	blood:
14	chr19:24220010..24221718-chr19:24229974..24232920,2	K562	blood:
15	chr19:24113206..24114972-chr19:24116698..24118505,2	K562	blood:
16	chr19:24183629..24184220-chr2:230045099..230046085,2	MCF-7	breast:
17	chr19:24183492..24185607-chr21:9824150..9825768,2	K562	blood:
18	chr1:156186507..156188050-chr19:24184494..24186477,2	MCF-7	breast:
19	chr19:24208713..24212092-chr19:24216129..24218537,3	K562	blood:
20	chr19:24217068..24219436-chr19:24220648..24223132,2	K562	blood:
21	chr19:24212558..24214864-chr19:24216760..24218557,2	MCF-7	breast:
22	chr16:47538608..47539204-chr19:24184110..24185018,4	MCF-7	breast:
23	chr19:24000616..24002168-chr19:24002694..24005183,2	MCF-7	breast:
24	chr19:24216611..24218601-chr19:24223296..24225894,2	K562	blood:
25	chr16:47538608..47539209-chr19:24184105..24184774,2	MCF-7	breast:
26	chr19:24181292..24184068-chr19:24184818..24187065,2	MCF-7	breast:
27	chr19:24046219..24048369-chr19:24050993..24053040,2	MCF-7	breast:
28	chr11:85195169..85196687-chr19:24184953..24186982,2	MCF-7	breast:
29	chr19:24090411..24092500-chr19:24096453..24099025,2	K562	blood:
30	chr19:23990207..23992454-chr19:24002314..24004892,2	K562	blood:
31	chr19:24121908..24123986-chr19:24125230..24127009,2	MCF-7	breast:
32	chr11:85195049..85196754-chr19:24184306..24186751,3	K562	blood:
33	chr19:24184654..24186244-chr21:9824227..9825807,2	K562	blood:
34	chr19:24182607..24185200-chr5:71145273..71148251,3	MCF-7	breast:
35	chr19:24184300..24184982-chr6:133593600..133594102,2	MCF-7	breast:
36	chr19:24183697..24185363-chr19:36065061..36068039,2	MCF-7	breast:
37	chr19:24046219..24048369-chr19:24050993..24053040,2	MCF-7	breast:
38	chr19:24183682..24186477-chr21:9825292..9827311,2	MCF-7	breast:
39	chr19:24183270..24185003-chr8:56755053..56756716,2	MCF-7	breast:
40	chr19:23944623..23946640-chr19:23952768..23956450,3	MCF-7	breast:
41	chr19:24184128..24185106-chr2:133038164..133039151,2	MCF-7	breast:
42	chr19:24215951..24218538-chr19:24221383..24223911,4	MCF-7	breast:
43	chr11:85193664..85196579-chr19:24184471..24186975,3	MCF-7	breast:
44	chr19:24183698..24186253-chr2:133010463..133012247,3	K562	blood:
45	chr19:24093000..24094884-chr19:24096609..24099585,2	K562	blood:
46	chr19:24214637..24216513-chr19:24268176..24271021,2	K562	blood:
47	chr19:23947709..23949776-chr19:23958415..23961237,2	K562	blood:
48	chr19:24173529..24175347-chr19:24179956..24182069,2	MCF-7	breast:
49	chr19:23456603..23457127-chr19:24215859..24216611,4	MCF-7	breast:
50	chr19:24183126..24185198-chr5:71145386..71148247,2	MCF-7	breast:

(count:29 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RPSAP58-2	chr19:24014399-24014998	NONHSAT063933
2	lnc-RPSAP58-2	chr19:23990628-23990741	NONHSAT063933
3	lnc-ZNF254-2	chr19:24118022-24118975	NONHSAT063946
4	lnc-RPSAP58-2	chr19:24014399-24014998	NONHSAT063934
5	lnc-ZNF681-2	chr19:24134950-24135238	NONHSAT063949
6	lnc-RPSAP58-3	chr19:24051557-24054170	NONHSAT063941
7	lnc-RPSAP58-2	chr19:23991521-23991616	NONHSAT063933
8	lnc-ZNF681-2	chr19:24134972-24135238	ENSG00000104777
9	lnc-ZNF726-2	chr19:24218834-24223805	NONHSAT063953
10	lnc-RPSAP58-3	chr19:24053508-24054170	NONHSAT063942
11	lnc-RPSAP58-2	chr19:23990628-23990741	NONHSAT063935
12	lnc-ZNF681-4	chr19:24231276-24231697	NONHSAT063954
13	lnc-RPSAP58-2	chr19:23991521-23992317	NONHSAT063935
14	lnc-ZNF726-1	chr19:23968384-23969193	ENSG00000250795
15	lnc-ZNF681-2	chr19:24140533-24140732	ENSG00000104777
16	lnc-ZNF726-1	chr19:23969576-23969850	ENSG00000250795
17	lnc-RPSAP58-2	chr19:23964883-23965301	NONHSAT063935
18	lnc-ZNF681-2	chr19:24140533-24141028	NONHSAT063949
19	lnc-ZNF681-4	chr19:24232042-24232758	NONHSAT063954
20	lnc-ZNF681-3	chr19:23981726-23982279	NONHSAT063937
21	lnc-ZNF681-2	chr19:24101883-24103000	ENSG00000104777
22	lnc-RPSAP58-3	chr19:24051517-24052736	NONHSAT063942
23	lnc-RPSAP58-4	chr19:24110590-24112089	ENSG00000269397.1
24	lnc-ZNF726-1	chr19:23969947-23970608	ENSG00000250795
25	lnc-RPSAP58-3	chr19:24047842-24047979	NONHSAT063941
26	lnc-ZNF254-1	chr19:24240733-24240767	NONHSAT063955
27	lnc-ZNF254-1	chr19:24232253-24232641	NONHSAT063955
28	lnc-ZNF681-4	chr19:24231737-24231816	NONHSAT063954
29	lnc-ZNF681-4	chr19:24240392-24241030	NONHSAT063954

No data

Variant related genes	Relation type
ZNF726	TF binding region
ENSG00000267924	TF binding region
ZNF92P3	TF binding region
ZNF254	TF binding region
RNA5-8SP4	TF binding region
RPSAP58	TF binding region
ENSG00000269662	TF binding region
ENSG00000269397	TF binding region
ENSG00000233836	TF binding region
ENSG00000268362	TF binding region
ENSG00000269289	TF binding region
ZNF726	CpG island
ENSG00000267924	CpG island
ZNF92P3	CpG island
ZNF254	CpG island
RNA5-8SP4	CpG island
RPSAP58	CpG island
ENSG00000269662	CpG island
ENSG00000269397	CpG island
ENSG00000233836	CpG island
ENSG00000268362	CpG island
ENSG00000269289	CpG island
ENSG00000233836	chromatin interactions
ENSG00000213971	chromatin interactions
ENSG00000202174	chromatin interactions
ENSG00000213096	chromatin interactions
ENSG00000222268	chromatin interactions
ENSG00000264462	chromatin interactions
ENSG00000269421	chromatin interactions
ENSG00000200434	chromatin interactions
ENSG00000213967	chromatin interactions
ENSG00000221288	chromatin interactions
ENSG00000268362	chromatin interactions
ENSG00000269289	chromatin interactions
ENSG00000269416	chromatin interactions
ENSG00000205246	chromatin interactions
ENSG00000264063	chromatin interactions
ENSG00000239776	chromatin interactions
NOTCH2	miRNA target sites
TIAL1	miRNA target sites
PGRMC1	miRNA target sites
GATA6	miRNA target sites
RALB	miRNA target sites

Extended variants
information (count: 12038 )
Associated
traits (count: 46 )

Variant overlapped rSNPs/rCNVs (count:12038 , 50 per page) page: 1 2 3 4 5 6 7 ... 241

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs555912444	chr19:23955174-23955175	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs574044403	chr19:23955231-23955232	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs541419362	chr19:23955246-23955247	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs553781360	chr19:23955252-23955253	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs192547498	chr19:23955258-23955259	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs184016623	chr19:23955265-23955266	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs56412648	chr19:23955348-23955349	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs397715178	chr19:23955349-23955350	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs7408196	chr19:23955382-23955383	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs558036723	chr19:23955444-23955445	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs543076898	chr19:23955454-23955455	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs561454726	chr19:23955469-23955470	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs7408197	chr19:23955486-23955487	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs187766166	chr19:23955522-23955523	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs566231461	chr19:23955543-23955544	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs533714507	chr19:23955559-23955560	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs12974554	chr19:23955574-23955575	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs570229549	chr19:23955589-23955590	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs537651662	chr19:23955618-23955619	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs555852863	chr19:23955642-23955643	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs116617716	chr19:23955652-23955653	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs372504152	chr19:23955708-23955709	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs534702063	chr19:23955750-23955751	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs553369872	chr19:23955751-23955752	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs572227821	chr19:23955765-23955766	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs114106893	chr19:23955769-23955770	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
27	rs112256852	chr19:23955811-23955812	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs192639724	chr19:23955817-23955818	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs575790477	chr19:23955851-23955852	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs62121263	chr19:23955852-23955853	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
31	rs577211515	chr19:23955866-23955867	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs62121264	chr19:23955873-23955874	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs199708111	chr19:23955876-23955877	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs147261415	chr19:23955882-23955883	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs142465314	chr19:23955884-23955885	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs112281536	chr19:23955885-23955886	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs77286418	chr19:23955905-23955906	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs112781113	chr19:23955906-23955907	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs370314893	chr19:23955907-23955908	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs147313323	chr19:23955912-23955913	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
41	rs200289823	chr19:23955927-23955928	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs113830510	chr19:23955928-23955929	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs189912373	chr19:23955961-23955962	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs149304590	chr19:23955970-23955971	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs540653029	chr19:23955986-23955987	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs12975597	chr19:23955996-23955997	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
47	rs148065044	chr19:23956000-23956001	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs71335705	chr19:23956070-23956071	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs151249551	chr19:23956074-23956075	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs377017716	chr19:23956086-23956087	Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:46)

Disease	PMID	Source
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
small cell lung cancer	20016488	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Breast cancer	22522925	CNVD
Renal cell carcinoma	18194544	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Autism	19287141	CNVD

Chromatin state (count:3217 , 50 per page) page: 1 2 3 4 5 6 7 ... 65

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:23946600-23956800	Weak transcription	Gastric	stomach
2	chr19:23946600-23960200	Weak transcription	Spleen	Spleen
3	chr19:23946600-23964600	Weak transcription	Left Ventricle	heart
4	chr19:23946600-23966000	Weak transcription	Brain Cingulate Gyrus	brain
5	chr19:23946800-23956800	Weak transcription	Fetal Muscle Leg	muscle
6	chr19:23946800-23956800	Weak transcription	Ovary	ovary
7	chr19:23946800-23957000	Weak transcription	Esophagus	oesophagus
8	chr19:23946800-23957400	Weak transcription	Adipose Nuclei	Adipose
9	chr19:23946800-23959000	Weak transcription	Fetal Muscle Trunk	muscle
10	chr19:23946800-23959400	Weak transcription	Brain Anterior Caudate	brain
11	chr19:23946800-23962200	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr19:23946800-23963800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
13	chr19:23946800-23964400	Weak transcription	Duodenum Smooth Muscle	Duodenum
14	chr19:23946800-23966000	Weak transcription	Primary T cells fromperipheralblood	blood
15	chr19:23946800-23973000	Weak transcription	Brain Hippocampus Middle	brain
16	chr19:23947000-23957400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr19:23947000-23966000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr19:23947200-23956600	Weak transcription	Primary hematopoietic stem cells	blood
19	chr19:23947200-23959800	Weak transcription	Fetal Heart	heart
20	chr19:23947200-23960000	Weak transcription	Fetal Lung	lung
21	chr19:23947200-23960400	Weak transcription	Fetal Kidney	kidney
22	chr19:23947200-23978200	Weak transcription	Pancreatic Islets	Pancreatic Islet
23	chr19:23947400-23959400	Weak transcription	Colonic Mucosa	Colon
24	chr19:23947400-23973000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr19:23947400-23973800	Weak transcription	Rectal Smooth Muscle	rectum
26	chr19:23947600-23964800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
27	chr19:23947800-23956800	Weak transcription	Rectal Mucosa Donor 29	rectum
28	chr19:23947800-23959800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
29	chr19:23948000-23969000	Weak transcription	Primary T helper cells fromperipheralblood	blood
30	chr19:23948000-23972400	Strong transcription	HUES64 Cell Line	embryonic stem cell
31	chr19:23948000-23976600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
32	chr19:23948200-23975600	Weak transcription	Primary T helper cells PMA-I stimulated	--
33	chr19:23948400-23956400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
34	chr19:23948400-23961400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
35	chr19:23948600-23959200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
36	chr19:23948800-23955200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
37	chr19:23949600-23955600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
38	chr19:23949600-23972600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
39	chr19:23949800-23975000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
40	chr19:23950200-23958800	Weak transcription	Fetal Stomach	stomach
41	chr19:23950200-23959200	Strong transcription	HUES6 Cell Line	embryonic stem cell
42	chr19:23950400-23960200	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
43	chr19:23950600-23956800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
44	chr19:23950800-23960400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
45	chr19:23951200-23960400	Weak transcription	Primary B cells from cord blood	blood
46	chr19:23951400-23968000	Weak transcription	Fetal Thymus	thymus
47	chr19:23951400-23973800	Strong transcription	HUES48 Cell Line	embryonic stem cell
48	chr19:23951600-23955200	Strong transcription	H9 Cell Line	embryonic stem cell
49	chr19:23951800-23959000	Weak transcription	Thymus	Thymus
50	chr19:23951800-23966200	ZNF genes & repeats	H9 Derived Neuron Cultured Cells	ES cell derived

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