Variant report

Variant	esv3319111
Chromosome Location	chr19:21062920-21064369
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 126 )
Associated
traits (count: 40 )

Variant overlapped rSNPs/rCNVs (count:126 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs78501719	chr19:21062923-21062924	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs75237172	chr19:21062928-21062929	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs570125980	chr19:21062947-21062948	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs376001952	chr19:21062948-21062949	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs539152031	chr19:21062956-21062957	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs190498968	chr19:21062968-21062969	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs182163136	chr19:21062973-21062974	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs534905543	chr19:21062974-21062975	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs151288757	chr19:21063004-21063005	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs557250588	chr19:21063014-21063015	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs111718871	chr19:21063033-21063034	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs11882146	chr19:21063036-21063037	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs11882147	chr19:21063037-21063038	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs62123213	chr19:21063039-21063040	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
15	rs11879275	chr19:21063055-21063056	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs372521083	chr19:21063063-21063064	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs143154296	chr19:21063071-21063072	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs150523589	chr19:21063073-21063074	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs145627186	chr19:21063075-21063076	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs116529969	chr19:21063083-21063084	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs371124811	chr19:21063086-21063087	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs373776641	chr19:21063089-21063090	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs116101845	chr19:21063093-21063094	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs376949454	chr19:21063101-21063102	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs11882167	chr19:21063102-21063103	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	mRNA abundance
26	rs371085600	chr19:21063105-21063106	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs118003249	chr19:21063106-21063107	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs77815367	chr19:21063107-21063108	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs375597218	chr19:21063108-21063109	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs74995188	chr19:21063109-21063110	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs78806887	chr19:21063113-21063114	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs368073470	chr19:21063115-21063116	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs76052181	chr19:21063118-21063119	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs370538141	chr19:21063120-21063121	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs75408784	chr19:21063122-21063123	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs79448545	chr19:21063126-21063127	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs78384516	chr19:21063128-21063129	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs76210904	chr19:21063131-21063132	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs373724276	chr19:21063147-21063148	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs71174763	chr19:21063150-21063151	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs62123214	chr19:21063151-21063152	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	mRNA abundance
42	rs28533732	chr19:21063155-21063156	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs367558526	chr19:21063159-21063160	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs386807717	chr19:21063162-21063163	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs62123215	chr19:21063164-21063165	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs371399939	chr19:21063165-21063166	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs28436703	chr19:21063169-21063170	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs117117648	chr19:21063171-21063172	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs112691026	chr19:21063177-21063178	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs77987607	chr19:21063181-21063182	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:40)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
small cell lung cancer	20016488	CNVD
Ductal carcinoma	22052326	CNVD
Schizophrenia	20967226	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:21049400-21071800	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
2	chr19:21052200-21063600	ZNF genes & repeats	Adipose Nuclei	Adipose
3	chr19:21063400-21075600	ZNF genes & repeats	Duodenum Mucosa	Duodenum

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