Variant report

Variant	esv3321838
Chromosome Location	chr19:23303462-23482478
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1570)
CpG islands
(count:916)
Chromatin interactive
region (count:20)
LncRNA
region (count:91)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1570 , 50 per page) page: 1 2 3 4 5 6 7 ... 32

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:23466709-23467067	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:23446454-23446478	HepG2	liver:	n/a	n/a
3	ARID3A	chr19:23447039-23447307	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:23456159-23456538	HepG2	liver:	n/a	n/a
5	ARID3A	chr19:23445696-23446125	HepG2	liver:	n/a	n/a
6	ARID3A	chr19:23456812-23457259	HepG2	liver:	n/a	n/a
7	ARID3A	chr19:23464504-23464974	HepG2	liver:	n/a	n/a
8	ARID3A	chr19:23444247-23444991	HepG2	liver:	n/a	n/a
9	ATF1	chr19:23446042-23446111	K562	blood:	n/a	n/a
10	ATF1	chr19:23447008-23447350	K562	blood:	n/a	n/a
11	ATF1	chr19:23433220-23433454	K562	blood:	n/a	n/a
12	ATF3	chr19:23366086-23366362	K562	blood:	n/a	n/a
13	BATF	chr19:23445759-23445944	GM12878	blood:	n/a	chr19:23445853-23445864
14	BATF	chr19:23445639-23446052	GM12878	blood:	n/a	chr19:23445853-23445864
15	BCL3	chr19:23444939-23445223	GM12878	blood:	n/a	n/a
16	BCLAF1	chr19:23432706-23433316	GM12878	blood:	n/a	chr19:23432778-23432791
17	BHLHE40	chr19:23456098-23456569	GM12878	blood:	n/a	n/a
18	BHLHE40	chr19:23432887-23433585	GM12878	blood:	n/a	n/a
19	BHLHE40	chr19:23456780-23457323	GM12878	blood:	n/a	n/a
20	BHLHE40	chr19:23465524-23465669	GM12878	blood:	n/a	n/a
21	BHLHE40	chr19:23456932-23457093	K562	blood:	n/a	n/a
22	BRCA1	chr19:23456838-23457224	GM12878	blood:	n/a	n/a
23	BRCA1	chr19:23444310-23444991	HepG2	liver:	n/a	n/a
24	BRCA1	chr19:23395180-23395185	GM12878	blood:	n/a	n/a
25	BRCA1	chr19:23477057-23477096	GM12878	blood:	n/a	n/a
26	BRCA1	chr19:23456865-23457107	HepG2	liver:	n/a	n/a
27	CBX3	chr19:23405791-23406025	K562	blood:	n/a	n/a
28	CEBPB	chr19:23438230-23438363	H1-hESC	embryonic stem cell:	n/a	n/a
29	CEBPB	chr19:23389389-23389722	HepG2	liver:	n/a	chr19:23389536-23389547
30	CEBPB	chr19:23444444-23445025	IMR90	lung:	n/a	n/a
31	CEBPB	chr19:23438969-23439732	IMR90	lung:	n/a	n/a
32	CEBPB	chr19:23438224-23439406	HepG2	liver:	n/a	n/a
33	CEBPB	chr19:23443670-23445159	HepG2	liver:	n/a	n/a
34	CEBPB	chr19:23439051-23439385	K562	blood:	n/a	n/a
35	CEBPB	chr19:23456709-23457365	H1-hESC	embryonic stem cell:	n/a	n/a
36	CEBPB	chr19:23446406-23447404	HepG2	liver:	n/a	n/a
37	CEBPB	chr19:23456040-23456143	K562	blood:	n/a	n/a
38	CEBPB	chr19:23406745-23406947	HepG2	liver:	n/a	chr19:23406918-23406931
39	CEBPB	chr19:23395011-23395106	HepG2	liver:	n/a	chr19:23395054-23395065
40	CEBPB	chr19:23442815-23443132	IMR90	lung:	n/a	n/a
41	CEBPB	chr19:23307308-23307376	HepG2	liver:	n/a	chr19:23307325-23307336
42	CEBPB	chr19:23444405-23444967	A549	lung:	n/a	n/a
43	CEBPB	chr19:23443767-23444036	A549	lung:	n/a	n/a
44	CEBPB	chr19:23438971-23439318	H1-hESC	embryonic stem cell:	n/a	n/a
45	CEBPB	chr19:23446897-23447304	Hela-S3	cervix:	n/a	n/a
46	CEBPB	chr19:23401084-23401234	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPB	chr19:23443663-23445174	HepG2	liver:	n/a	n/a
48	CEBPB	chr19:23421826-23422021	A549	lung:	n/a	n/a
49	CEBPB	chr19:23438912-23439398	MCF-7	breast:	n/a	n/a
50	CEBPB	chr19:23464853-23465097	HepG2	liver:	n/a	n/a

(count:916 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:23454693-23454743	GM12891	blood:	n/a
2	chr19:23454693-23454743	GM12891	blood:	n/a
3	chr19:23387068-23387118	HIPEpiC	eye:	n/a
4	chr19:23456575-23456625	A549	lung:	n/a
5	chr19:23454693-23454743	PANC-1	pancreas:	n/a
6	chr19:23390590-23390640	LNCaP	prostate:	n/a
7	chr19:23456790-23456840	AG04449	skin:	fetal
8	chr19:23456680-23456730	HL-60	blood:	n/a
9	chr19:23387133-23387183	ovcar-3	ovarian:	n/a
10	chr19:23385934-23385984	MCF10A-Er-Src	breast:	n/a
11	chr19:23454693-23454743	LNCaP	prostate:	n/a
12	chr19:23383482-23383532	SKMC	muscle:	n/a
13	chr19:23387133-23387183	Hepatocyte	liver:	n/a
14	chr19:23456680-23456730	AG10803	skin:	n/a
15	chr19:23386892-23386942	HIPEpiC	eye:	n/a
16	chr19:23456588-23456638	IMR90	lung:	fetal
17	chr19:23390590-23390640	Caco-2	colon:	n/a
18	chr19:23456575-23456625	Hela-S3	cervix:	n/a
19	chr19:23387133-23387183	HCPEpiC	choroid plexus:	n/a
20	chr19:23387068-23387118	SK-N-MC	brain:	n/a
21	chr19:23456790-23456840	AG10803	skin:	n/a
22	chr19:23456588-23456638	AoSMC	blood vessel:	n/a
23	chr19:23383482-23383532	Caco-2	colon:	n/a
24	chr19:23457005-23457055	CMK	blood:	n/a
25	chr19:23387133-23387183	HPAEpiC	pulmonary alveolar:	n/a
26	chr19:23433225-23433275	AG04450	lung:	fetal
27	chr19:23456790-23456840	HL-60	blood:	n/a
28	chr19:23385934-23385984	SK-N-MC	brain:	n/a
29	chr19:23454693-23454743	NT2-D1	testis:	n/a
30	chr19:23456790-23456840	HEEpiC	esophagus:	n/a
31	chr19:23457005-23457055	PrEC	prostate:	n/a
32	chr19:23454693-23454743	PFSK-1	brain:	n/a
33	chr19:23385934-23385984	HCT-116	colon:	n/a
34	chr19:23456588-23456638	NHDF-neo	bronchial:	n/a
35	chr19:23390590-23390640	HRCEpiC	kidney:	n/a
36	chr19:23387133-23387183	NT2-D1	testis:	n/a
37	chr19:23454693-23454743	A549	lung:	n/a
38	chr19:23433225-23433275	MCF10A-Er-Src	breast:	n/a
39	chr19:23386650-23386700	HUVEC	blood vessel:	n/a
40	chr19:23456790-23456840	HAEpiC	amniotic membrane:	n/a
41	chr19:23456680-23456730	Hela-S3	cervix:	n/a
42	chr19:23386784-23386834	GM12878	blood:	n/a
43	chr19:23433225-23433275	AG09319	gingival:	n/a
44	chr19:23386784-23386834	HL-60	blood:	n/a
45	chr19:23456790-23456840	HRE	kidney:	n/a
46	chr19:23390590-23390640	GM06990	blood:	n/a
47	chr19:23386650-23386700	NT2-D1	testis:	n/a
48	chr19:23383482-23383532	Hepatocyte	liver:	n/a
49	chr19:23456680-23456730	PFSK-1	brain:	n/a
50	chr19:23386892-23386942	MCF-7	breast:	n/a

(count:20 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:23456603..23457127-chr19:24215859..24216611,4	MCF-7	breast:
2	chr19:23426796..23428873-chr19:23431504..23434558,3	K562	blood:
3	chr19:23431827..23434798-chr19:23443635..23445528,2	MCF-7	breast:
4	chr19:23433051..23435448-chr19:23455541..23457705,2	MCF-7	breast:
5	chr19:23456110..23458063-chr19:23465875..23467770,2	MCF-7	breast:
6	chr19:23431827..23434798-chr19:23443635..23445528,2	MCF-7	breast:
7	chr19:23305214..23307140-chr19:23310499..23313073,2	MCF-7	breast:
8	chr19:23439080..23441693-chr19:23448189..23450377,2	MCF-7	breast:
9	chr17:56735011..56736549-chr19:23464937..23466566,2	MCF-7	breast:
10	chr19:23450360..23452680-chr19:23454564..23456528,2	MCF-7	breast:
11	chr19:23450360..23452680-chr19:23454564..23456528,2	MCF-7	breast:
12	chr19:23443599..23446084-chr19:23455345..23457112,3	MCF-7	breast:
13	chr19:23432656..23435103-chr19:23454271..23457071,2	MCF-7	breast:
14	chr19:23426796..23428873-chr19:23431504..23433351,2	K562	blood:
15	chr19:23298392..23301079-chr19:23302375..23304174,2	MCF-7	breast:
16	chr19:23443599..23446084-chr19:23455345..23457112,3	MCF-7	breast:
17	chr19:23433051..23435448-chr19:23455541..23457705,2	MCF-7	breast:
18	chr13:91999526..92000349-chr19:23432834..23433455,2	NB4	blood:
19	chr19:23432656..23435103-chr19:23454271..23457071,2	MCF-7	breast:
20	chr19:23305214..23307140-chr19:23310499..23313073,2	MCF-7	breast:

(count:91 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AC092329.1-1	chr19:23453020-23453094	ENSG00000213971.3
2	lnc-AC092329.1-1	chr19:23443666-23443738	NONHSAT063877
3	lnc-AC092329.1-1	chr19:23443632-23443736	XLOC_013274
4	lnc-ZNF724P-3	chr19:23414068-23414163	NR_045525
5	lnc-AC092329.1-1	chr19:23452622-23452891	NONHSAT063877
6	lnc-AC092329.1-1	chr19:23443666-23443736	XLOC_013274
7	lnc-AC092329.1-1	chr19:23444026-23446676	ENSG00000213971.3
8	lnc-AC092329.1-1	chr19:23444422-23444546	ENSG00000213971.3
9	lnc-AC092329.1-1	chr19:23444422-23444546	NONHSAT063877
10	lnc-AC092329.1-1	chr19:23441500-23442918	NONHSAT063868
11	lnc-AC092329.1-1	chr19:23455421-23455525	ENSG00000213971.3
12	lnc-AC092329.1-1	chr19:23456878-23456998	ENSG00000213971.3
13	lnc-AC092329.1-1	chr19:23444157-23444546	ENSG00000213971.3
14	lnc-AC092329.1-1	chr19:23443666-23443736	NONHSAT063868
15	lnc-AC092329.1-1	chr19:23455421-23455521	ENSG00000213971.3
16	lnc-AC092329.1-1	chr19:23443494-23443736	XLOC_013274
17	lnc-AC092329.1-1	chr19:23456878-23457034	ENSG00000269107.1
18	lnc-AC092329.1-1	chr19:23453020-23453094	NONHSAT063867
19	lnc-AC092329.1-1	chr19:23444422-23444546	ENSG00000213971.3
20	lnc-AC092329.1-1	chr19:23442824-23442918	ENSG00000213971.3
21	lnc-AC092329.1-1	chr19:23443533-23443736	ENSG00000213971.3
22	lnc-AC092329.1-1	chr19:23456878-23457053	ENSG00000213971.3
23	lnc-AC092329.1-1	chr19:23453020-23453094	ENSG00000269107.1
24	lnc-AC092329.1-1	chr19:23442708-23442918	ENSG00000213971.3
25	lnc-AC092329.1-1	chr19:23453020-23453094	XLOC_013274
26	lnc-AC092329.1-1	chr19:23442803-23442918	ENSG00000213971.3
27	lnc-AC092329.1-1	chr19:23441006-23443055	XLOC_013274
28	lnc-AC092329.1-1	chr19:23444422-23444546	XLOC_013274
29	lnc-AC092329.1-1	chr19:23444422-23444546	NONHSAT063866
30	lnc-AC092329.1-1	chr19:23456878-23456998	ENSG00000213971.3
31	lnc-AC092329.1-1	chr19:23444422-23444546	XLOC_013274
32	lnc-AC092329.1-1	chr19:23456878-23457046	ENSG00000213971.3
33	lnc-AC092329.1-1	chr19:23456878-23457032	XLOC_013274
34	lnc-AC092329.1-1	chr19:23444422-23444546	ENSG00000213971.3
35	lnc-ZNF724P-3	chr19:23414969-23415095	NR_045525
36	lnc-AC092329.1-1	chr19:23456878-23457034	ENSG00000213971.3
37	lnc-AC092329.1-1	chr19:23456877-23457037	NONHSAT063877
38	lnc-AC092329.1-1	chr19:23456878-23457037	XLOC_013274
39	lnc-AC092329.1-1	chr19:23456878-23457050	ENSG00000213971.3
40	lnc-AC092329.1-1	chr19:23443666-23443736	NONHSAT063867
41	lnc-AC092329.1-1	chr19:23453020-23453094	ENSG00000213971.3
42	lnc-AC092329.1-1	chr19:23444422-23444546	XLOC_013274
43	lnc-AC092329.1-1	chr19:23444422-23447570	XLOC_013274
44	lnc-AC092329.1-1	chr19:23437860-23438373	NONHSAT063868
45	lnc-AC092329.1-1	chr19:23456878-23457053	NONHSAT063867
46	lnc-AC092329.1-1	chr19:23444422-23444546	NONHSAT063867
47	lnc-AC092329.1-1	chr19:23444422-23445436	ENSG00000213971.3
48	lnc-AC092329.1-1	chr19:23443666-23443736	ENSG00000213971.3
49	lnc-AC092329.1-1	chr19:23456878-23457002	XLOC_013274
50	lnc-AC092329.1-1	chr19:23452622-23453094	XLOC_013274

No data

Variant related genes	Relation type
ENSG00000268105	TF binding region
ZNF724P	TF binding region
ENSG00000213971	TF binding region
ENSG00000221478	TF binding region
ENSG00000269471	TF binding region
ZNF730	TF binding region
SNX6P1	TF binding region
ENSG00000270479	TF binding region
ENSG00000269107	TF binding region
ENSG00000269837	TF binding region
VN1R91P	TF binding region
VN1R90P	TF binding region
ENSG00000268469	TF binding region
ENSG00000268105	CpG island
ZNF724P	CpG island
ENSG00000213971	CpG island
ENSG00000221478	CpG island
ENSG00000269471	CpG island
ZNF730	CpG island
SNX6P1	CpG island
ENSG00000270479	CpG island
ENSG00000269107	CpG island
ENSG00000269837	CpG island
VN1R91P	CpG island
VN1R90P	CpG island
ENSG00000268469	CpG island
ENSG00000215417	chromatin interactions
ENSG00000183850	chromatin interactions
ENSG00000267920	chromatin interactions
ENSG00000213096	chromatin interactions
ENSG00000268362	chromatin interactions
ENSG00000213971	chromatin interactions
ENSG00000269837	chromatin interactions
ENSG00000270479	chromatin interactions
ENSG00000196081	chromatin interactions
HECTD2	miRNA target sites
KIF16B	miRNA target sites
TES	miRNA target sites

Extended variants
information (count: 6710 )
Associated
traits (count: 46 )

Variant overlapped rSNPs/rCNVs (count:6710 , 50 per page) page: 1 2 3 4 5 6 7 ... 135

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs192164151	chr19:23303482-23303483	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs139748846	chr19:23303528-23303529	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs568703572	chr19:23303603-23303604	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs574979515	chr19:23303612-23303613	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs542340801	chr19:23303619-23303620	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs183776994	chr19:23303748-23303749	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs144442313	chr19:23303750-23303751	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs375763035	chr19:23303789-23303790	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
9	rs146121610	chr19:23303863-23303864	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs558732667	chr19:23303933-23303934	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
11	rs565526911	chr19:23303948-23303949	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs532878833	chr19:23303959-23303960	Weak transcription ZNF genes & repeats Strong transcription	TF binding region Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs79760527	chr19:23304042-23304043	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs562908178	chr19:23304047-23304048	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs12611318	chr19:23304072-23304073	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs548712695	chr19:23304083-23304084	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs576996907	chr19:23304091-23304092	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs567341705	chr19:23304096-23304097	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs534766266	chr19:23304100-23304101	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs536238283	chr19:23304105-23304106	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs77539416	chr19:23304124-23304125	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs3048873	chr19:23304140-23304141	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs397859359	chr19:23304141-23304142	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs57564052	chr19:23304157-23304158	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs538578066	chr19:23304168-23304169	Weak transcription ZNF genes & repeats Strong transcription	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs369853886	chr19:23304201-23304202	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs140104705	chr19:23304203-23304204	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs189805478	chr19:23304251-23304252	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs570404717	chr19:23304290-23304291	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs574940271	chr19:23304342-23304343	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs535955448	chr19:23304343-23304344	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs554609872	chr19:23304378-23304379	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs182836854	chr19:23304391-23304392	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs116517762	chr19:23304426-23304427	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs2035172	chr19:23304504-23304505	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs543312227	chr19:23304514-23304515	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs566461152	chr19:23304523-23304524	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs577599227	chr19:23304559-23304560	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs186996035	chr19:23304567-23304568	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs7507433	chr19:23304581-23304582	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs530159352	chr19:23304585-23304586	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs548292923	chr19:23304659-23304660	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs560604324	chr19:23304664-23304665	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs80193754	chr19:23304671-23304672	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs546754789	chr19:23304745-23304746	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs192198718	chr19:23304783-23304784	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs145743359	chr19:23304784-23304785	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs377561777	chr19:23304864-23304865	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs200655309	chr19:23304869-23304870	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs550501667	chr19:23304885-23304886	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:46)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
small cell lung cancer	20016488	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Melanoma	20877625	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:2631 , 50 per page) page: 1 2 3 4 5 6 7 ... 53

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:23300400-23306800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr19:23300600-23304000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr19:23300600-23306600	Weak transcription	Ovary	ovary
4	chr19:23300600-23306800	Weak transcription	Thymus	Thymus
5	chr19:23300600-23310400	Weak transcription	Right Atrium	heart
6	chr19:23300800-23306200	Weak transcription	Primary B cells from cord blood	blood
7	chr19:23301000-23304200	Weak transcription	HSMM	muscle
8	chr19:23301000-23305000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
9	chr19:23301000-23305200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr19:23301000-23306800	Weak transcription	NH-A	brain
11	chr19:23301000-23310200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr19:23301000-23310600	Weak transcription	Fetal Kidney	kidney
13	chr19:23301000-23310800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr19:23301200-23304000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr19:23301400-23303800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr19:23301400-23307400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr19:23301400-23307800	Weak transcription	Muscle Satellite Cultured Cells	--
18	chr19:23301400-23310200	Weak transcription	H9 Cell Line	embryonic stem cell
19	chr19:23301400-23317000	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
20	chr19:23301600-23306800	Weak transcription	H1 Cell Line	embryonic stem cell
21	chr19:23301800-23305200	Weak transcription	Brain Germinal Matrix	brain
22	chr19:23301800-23308000	ZNF genes & repeats	Dnd41	blood
23	chr19:23301800-23317000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr19:23302000-23304600	Weak transcription	Fetal Brain Male	brain
25	chr19:23302000-23305800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
26	chr19:23302000-23305800	Weak transcription	Fetal Lung	lung
27	chr19:23302200-23304400	Weak transcription	Cortex derived primary cultured neurospheres	brain
28	chr19:23302200-23304600	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
29	chr19:23302800-23304000	Strong transcription	HUES6 Cell Line	embryonic stem cell
30	chr19:23302800-23305400	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
31	chr19:23302800-23309600	Strong transcription	HUES64 Cell Line	embryonic stem cell
32	chr19:23302800-23312200	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr19:23303000-23303600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
34	chr19:23303000-23304000	Strong transcription	Primary hematopoietic stem cells	blood
35	chr19:23303000-23305600	Strong transcription	HUES48 Cell Line	embryonic stem cell
36	chr19:23303000-23306800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
37	chr19:23303200-23304000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
38	chr19:23303400-23304000	Weak transcription	Fetal Stomach	stomach
39	chr19:23303400-23306400	Strong transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr19:23303600-23304000	ZNF genes & repeats	iPS-18 Cell Line	embryonic stem cell
41	chr19:23303600-23312200	ZNF genes & repeats	Monocytes-CD14+_RO01746	blood
42	chr19:23303800-23305600	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Female	--
43	chr19:23304000-23305000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
44	chr19:23304000-23305800	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
45	chr19:23304000-23306000	Weak transcription	Primary hematopoietic stem cells	blood
46	chr19:23304000-23306600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
47	chr19:23304000-23311200	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
48	chr19:23304200-23304600	ZNF genes & repeats	HSMM	muscle
49	chr19:23304200-23304800	Weak transcription	Fetal Stomach	stomach
50	chr19:23304400-23305600	Strong transcription	Cortex derived primary cultured neurospheres	brain

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