No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs540016771 |
chr2:173291140-173291141 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs558736924 |
chr2:173291141-173291142 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs143457098 |
chr2:173291163-173291164 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs182133041 |
chr2:173291170-173291171 |
Enhancers Weak transcription Bivalent Enhancer
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs562135096 |
chr2:173291225-173291226 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs111718021 |
chr2:173291269-173291270 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs73023476 |
chr2:173291359-173291360 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs528682561 |
chr2:173291360-173291361 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs147265557 |
chr2:173291384-173291385 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs141686758 |
chr2:173291437-173291438 |
Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs145860229 |
chr2:173291481-173291482 |
Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs112436982 |
chr2:173291516-173291517 |
Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs183610084 |
chr2:173291590-173291591 |
Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs550543903 |
chr2:173291605-173291606 |
Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs548433893 |
chr2:173291624-173291625 |
Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs568445816 |
chr2:173291644-173291645 |
Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs188293303 |
chr2:173291649-173291650 |
Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs547321726 |
chr2:173291653-173291654 |
Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs547783382 |
chr2:173291724-173291725 |
Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs530525819 |
chr2:173291802-173291803 |
Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs79603749 |
chr2:173291833-173291834 |
Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs570278480 |
chr2:173291865-173291866 |
Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs181118073 |
chr2:173291874-173291875 |
Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs143968653 |
chr2:173291915-173291916 |
Flanking Active TSS Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs73976793 |
chr2:173292035-173292036 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding regionCpG island
|
1 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
26 |
rs556066382 |
chr2:173292122-173292123 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs139999485 |
chr2:173292123-173292124 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs547926969 |
chr2:173292131-173292132 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs149424078 |
chr2:173292141-173292142 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs185356186 |
chr2:173292157-173292158 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs372445648 |
chr2:173292199-173292200 |
Active TSS Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer
|
TF binding region
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs62167766 |
chr2:173292213-173292214 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs376150429 |
chr2:173292233-173292234 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG island
|
1 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs201818324 |
chr2:173292271-173292272 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs545924680 |
chr2:173292273-173292274 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs564668995 |
chr2:173292277-173292278 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs201590863 |
chr2:173292287-173292288 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs531972975 |
chr2:173292295-173292296 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs550482326 |
chr2:173292314-173292315 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs562335726 |
chr2:173292316-173292317 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs529633700 |
chr2:173292330-173292331 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs570513719 |
chr2:173292340-173292341 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs188609652 |
chr2:173292347-173292348 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs566072397 |
chr2:173292349-173292350 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs144682022 |
chr2:173292379-173292380 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs551897893 |
chr2:173292381-173292382 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs373890886 |
chr2:173292395-173292396 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs148497864 |
chr2:173292438-173292439 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs555954686 |
chr2:173292472-173292473 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs144341070 |
chr2:173292503-173292504 |
Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive regionlncRNA
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|