No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs368706003 |
chr21:47579551-47579552 |
Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs532771227 |
chr21:47579563-47579564 |
Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
3 |
rs34663366 |
chr21:47579566-47579567 |
Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
4 |
rs562575264 |
chr21:47579571-47579572 |
Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs529755869 |
chr21:47579577-47579578 |
Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs547970747 |
chr21:47579579-47579580 |
Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs114995006 |
chr21:47579581-47579582 |
Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
8 |
rs566737266 |
chr21:47579600-47579601 |
Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs527270804 |
chr21:47579601-47579602 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs4819210 |
chr21:47579668-47579669 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
11 |
rs570384477 |
chr21:47579717-47579718 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs537652191 |
chr21:47579718-47579719 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs549522442 |
chr21:47579721-47579722 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs568150442 |
chr21:47579742-47579743 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs56163044 |
chr21:47579752-47579753 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
16 |
rs187070860 |
chr21:47579774-47579775 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs554741098 |
chr21:47579782-47579783 |
Weak transcription Strong transcription ZNF genes & repeats Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs573226153 |
chr21:47579802-47579803 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs534152139 |
chr21:47579817-47579818 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs371395383 |
chr21:47579842-47579843 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs559316576 |
chr21:47579878-47579879 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
22 |
rs149151680 |
chr21:47579889-47579890 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs55720515 |
chr21:47579901-47579902 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
24 |
rs563117232 |
chr21:47579904-47579905 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs574931333 |
chr21:47579945-47579946 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
26 |
rs114051123 |
chr21:47579988-47579989 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs191086828 |
chr21:47579997-47579998 |
ZNF genes & repeats Strong transcription Weak transcription Genic enhancers Enhancers
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs143364984 |
chr21:47580018-47580019 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
29 |
rs534664598 |
chr21:47580032-47580033 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs182383553 |
chr21:47580080-47580081 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
31 |
rs577402967 |
chr21:47580084-47580085 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs188268342 |
chr21:47580173-47580174 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
33 |
rs116389807 |
chr21:47580210-47580211 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs376824906 |
chr21:47580252-47580253 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
TF binding regionChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
35 |
rs563223099 |
chr21:47580324-47580325 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs535274726 |
chr21:47580340-47580341 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs548682008 |
chr21:47580349-47580350 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs148347514 |
chr21:47580376-47580377 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
39 |
rs202159311 |
chr21:47580384-47580385 |
ZNF genes & repeats Strong transcription Weak transcription Transcr. at gene 5' and 3'
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
40 |
rs7282697 |
chr21:47580415-47580416 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
CpG islandChromatin interactive region
|
4 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
41 |
rs558954068 |
chr21:47580416-47580417 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
CpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs577302280 |
chr21:47580440-47580441 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
CpG islandChromatin interactive region
|
4 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs538586005 |
chr21:47580462-47580463 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs556557900 |
chr21:47580481-47580482 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
45 |
rs575011533 |
chr21:47580487-47580488 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs368677811 |
chr21:47580494-47580495 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
47 |
rs55644041 |
chr21:47580532-47580533 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
48 |
rs58026442 |
chr21:47580537-47580538 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs12627614 |
chr21:47580547-47580548 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
50 |
rs545482488 |
chr21:47580551-47580552 |
ZNF genes & repeats Strong transcription Weak transcription Active TSS
|
Chromatin interactive region
|
3 gene(s)
|
Overlapped CNVs
|
n/a
|