Variant report

Variant	esv3326278
Chromosome Location	chr7:26239847-26240161
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:544)
CpG islands
(count:61)
Chromatin interactive
region (count:93)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:544 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:26237645-26240934	K562	blood:	n/a	n/a
2	ARID3A	chr7:26239009-26240013	HepG2	liver:	n/a	n/a
3	ATF2	chr7:26238799-26241193	H1-hESC	embryonic stem cell:	n/a	chr7:26240423-26240437
4	ATF2	chr7:26239235-26241418	GM12878	blood:	n/a	chr7:26240423-26240437
5	ATF2	chr7:26239389-26241173	GM12878	blood:	n/a	chr7:26240423-26240437
6	ATF2	chr7:26238593-26241105	H1-hESC	embryonic stem cell:	n/a	chr7:26240423-26240437
7	ATF3	chr7:26239344-26240799	A549	lung:	n/a	n/a
8	ATF3	chr7:26240144-26240758	K562	blood:	n/a	n/a
9	ATF3	chr7:26239741-26240497	A549	lung:	n/a	n/a
10	BACH1	chr7:26239432-26240344	K562	blood:	n/a	n/a
11	BCL11A	chr7:26240093-26240458	GM12878	blood:	n/a	n/a
12	BCL3	chr7:26239873-26241142	A549	lung:	n/a	n/a
13	BCL3	chr7:26240019-26240600	K562	blood:	n/a	n/a
14	BCL3	chr7:26240120-26240494	GM12878	blood:	n/a	n/a
15	BCL3	chr7:26238938-26240758	A549	lung:	n/a	n/a
16	BCLAF1	chr7:26238854-26240657	GM12878	blood:	n/a	n/a
17	BCLAF1	chr7:26239392-26240604	GM12878	blood:	n/a	n/a
18	BCLAF1	chr7:26239878-26240489	K562	blood:	n/a	n/a
19	BCLAF1	chr7:26238925-26241630	K562	blood:	n/a	chr7:26241388-26241397
20	BHLHE40	chr7:26239435-26242156	K562	blood:	n/a	chr7:26241559-26241575 chr7:26241618-26241634 chr7:26241556-26241572 chr7:26242047-26242063
21	BHLHE40	chr7:26239612-26242521	GM12878	blood:	n/a	chr7:26241559-26241575 chr7:26241618-26241634 chr7:26241556-26241572 chr7:26242047-26242063
22	BHLHE40	chr7:26239673-26242127	HepG2	liver:	n/a	chr7:26241559-26241575 chr7:26241618-26241634 chr7:26241556-26241572 chr7:26242047-26242063
23	BRCA1	chr7:26240123-26241543	Hela-S3	cervix:	n/a	n/a
24	BRCA1	chr7:26239752-26240510	GM12878	blood:	n/a	n/a
25	CBX3	chr7:26239662-26241268	K562	blood:	n/a	n/a
26	CCNT2	chr7:26237794-26242144	K562	blood:	n/a	chr7:26241755-26241764 chr7:26241718-26241727 chr7:26241531-26241540 chr7:26241723-26241732 chr7:26241536-26241545
27	CEBPB	chr7:26240105-26240771	K562	blood:	n/a	n/a
28	CEBPB	chr7:26239973-26241282	Hela-S3	cervix:	n/a	n/a
29	CEBPB	chr7:26239186-26240614	GM12878	blood:	n/a	n/a
30	CEBPB	chr7:26239363-26240917	A549	lung:	n/a	n/a
31	CEBPD	chr7:26239242-26241690	K562	blood:	n/a	n/a
32	CEBPD	chr7:26239978-26240660	K562	blood:	n/a	n/a
33	CHD1	chr7:26235855-26242752	GM12878	blood:	n/a	n/a
34	CHD1	chr7:26234064-26243804	H1-hESC	embryonic stem cell:	n/a	n/a
35	CHD2	chr7:26239058-26241941	HepG2	liver:	n/a	n/a
36	CHD2	chr7:26238150-26242387	K562	blood:	n/a	n/a
37	CHD2	chr7:26239002-26242125	Hela-S3	cervix:	n/a	n/a
38	CHD2	chr7:26239048-26242078	GM12878	blood:	n/a	n/a
39	CHD2	chr7:26239189-26241579	H1-hESC	embryonic stem cell:	n/a	n/a
40	CREB1	chr7:26239626-26242130	A549	lung:	n/a	n/a
41	CREB1	chr7:26240131-26240836	ECC-1	luminal epithelium:	n/a	n/a
42	CREB1	chr7:26239562-26241615	H1-hESC	embryonic stem cell:	n/a	n/a
43	CREB1	chr7:26239330-26242164	HepG2	liver:	n/a	n/a
44	CREB1	chr7:26239953-26240741	ECC-1	luminal epithelium:	n/a	n/a
45	CREB1	chr7:26239696-26242053	K562	blood:	n/a	n/a
46	CREB1	chr7:26239722-26241876	GM12878	blood:	n/a	n/a
47	CREB1	chr7:26239983-26241603	HepG2	liver:	n/a	n/a
48	CREB1	chr7:26239758-26240849	H1-hESC	embryonic stem cell:	n/a	n/a
49	CREB1	chr7:26238924-26241019	K562	blood:	n/a	n/a
50	CTBP2	chr7:26239729-26241630	H1-hESC	embryonic stem cell:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:26240087-26240137	PFSK-1	brain:	n/a
2	chr7:26240087-26240137	AG09309	skin:	n/a
3	chr7:26240087-26240137	U87	brain:	n/a
4	chr7:26240087-26240137	BJ	skin:	n/a
5	chr7:26240087-26240137	NHDF-neo	bronchial:	n/a
6	chr7:26240087-26240137	K562	blood:	n/a
7	chr7:26240087-26240137	HEEpiC	esophagus:	n/a
8	chr7:26240087-26240137	MCF10A-Er-Src	breast:	n/a
9	chr7:26240087-26240137	GM12878	blood:	n/a
10	chr7:26240087-26240137	ECC-1	luminal epithelium:	n/a
11	chr7:26240087-26240137	GM12891	blood:	n/a
12	chr7:26240087-26240137	Hepatocyte	liver:	n/a
13	chr7:26240087-26240137	GM19239	blood:	n/a
14	chr7:26240087-26240137	A549	lung:	n/a
15	chr7:26240087-26240137	HEK293	kidney:	embryo
16	chr7:26240087-26240137	H1-hESC	embryonic stem cell:	embryo
17	chr7:26240087-26240137	HepG2	liver:	n/a
18	chr7:26240087-26240137	HCM	heart:	n/a
19	chr7:26240087-26240137	HRPEpiC	eye:	n/a
20	chr7:26240087-26240137	SK-N-SH_RA	brain:	n/a
21	chr7:26240087-26240137	AG04449	skin:	fetal
22	chr7:26240087-26240137	SKMC	muscle:	n/a
23	chr7:26240087-26240137	SK-N-SH	brain:	n/a
24	chr7:26240087-26240137	HL-60	blood:	n/a
25	chr7:26240087-26240137	NH-A	brain:	n/a
26	chr7:26240087-26240137	CMK	blood:	n/a
27	chr7:26240087-26240137	SK-N-MC	brain:	n/a
28	chr7:26240087-26240137	PrEC	prostate:	n/a
29	chr7:26240087-26240137	HMEC	breast:	n/a
30	chr7:26240087-26240137	HCF	heart:	n/a
31	chr7:26240087-26240137	ovcar-3	ovarian:	n/a
32	chr7:26240087-26240137	Hela-S3	cervix:	n/a
33	chr7:26240087-26240137	HIPEpiC	eye:	n/a
34	chr7:26240087-26240137	HRCEpiC	kidney:	n/a
35	chr7:26240087-26240137	BE2_C	brain:	n/a
36	chr7:26240087-26240137	NT2-D1	testis:	n/a
37	chr7:26240087-26240137	HPAEpiC	pulmonary alveolar:	n/a
38	chr7:26240087-26240137	GM06990	blood:	n/a
39	chr7:26240087-26240137	PANC-1	pancreas:	n/a
40	chr7:26240087-26240137	Caco-2	colon:	n/a
41	chr7:26240087-26240137	T-47D	breast:	n/a
42	chr7:26240087-26240137	SAEC	small airway:	n/a
43	chr7:26240087-26240137	Jurkat	blood:	n/a
44	chr7:26240087-26240137	AG10803	skin:	n/a
45	chr7:26240087-26240137	GM12892	blood:	n/a
46	chr7:26240087-26240137	MCF-7	breast:	n/a
47	chr7:26240087-26240137	NHBE	bronchial:	n/a
48	chr7:26240087-26240137	AoSMC	blood vessel:	n/a
49	chr7:26240087-26240137	HCT-116	colon:	n/a
50	chr7:26240087-26240137	LNCaP	prostate:	n/a

(count:93 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr7:26238219..26243115-chr7:26329445..26335775,8	MCF-7	breast:
2	chr11:64007751..64008560-chr7:26240100..26240712,2	Hela-S3	cervix:
3	chr12:93964244..93964892-chr7:26240134..26240841,2	Hela-S3	cervix:
4	chr7:26238789..26244149-chr7:26328226..26335284,15	MCF-7	breast:
5	chr12:46766370..46767109-chr7:26240120..26240688,2	NB4	blood:
6	chr12:53400201..53400989-chr7:26240067..26240673,2	HCT-116	colon:
7	chr3:130612324..130613315-chr7:26239802..26240770,2	Hela-S3	cervix:
8	chr19:39925768..39926759-chr7:26240090..26240786,2	Hela-S3	cervix:
9	chr11:47290636..47291503-chr7:26239910..26240778,2	Hela-S3	cervix:
10	chr7:26188281..26195881-chr7:26237249..26245873,15	K562	blood:
11	chr4:83294479..83295231-chr7:26239827..26240434,2	NB4	blood:
12	chr10:79685769..79686630-chr7:26240074..26240975,2	Hela-S3	cervix:
13	chr16:81040442..81040995-chr7:26240154..26240700,2	Hela-S3	cervix:
14	chr7:26238958..26239930-chrX:49022734..49023422,2	Hela-S3	cervix:
15	chr3:161087820..161090854-chr7:26238154..26241381,3	MCF-7	breast:
16	chr1:32706092..32706733-chr7:26239871..26240732,2	Hela-S3	cervix:
17	chr19:16186533..16187310-chr7:26240008..26240799,2	Hela-S3	cervix:
18	chr1:113161314..113161870-chr7:26239955..26240937,2	Hela-S3	cervix:
19	chr15:72523071..72523955-chr7:26239993..26241131,3	Hela-S3	cervix:
20	chr1:1510022..1510588-chr7:26240133..26240740,2	Hela-S3	cervix:
21	chr5:131892889..131893622-chr7:26239822..26240389,2	Hela-S3	cervix:
22	chr7:26238387..26240189-chr7:26396014..26397576,2	MCF-7	breast:
23	chr1:154947092..154947828-chr7:26240057..26240643,2	Hela-S3	cervix:
24	chr7:26124079..26126684-chr7:26237086..26240273,4	MCF-7	breast:
25	chr7:26237797..26240269-chr7:26356166..26359044,2	MCF-7	breast:
26	chr6:17705801..17708591-chr7:26239203..26241423,2	K562	blood:
27	chr2:27994146..27995072-chr7:26239372..26239915,2	Hela-S3	cervix:
28	chr7:26190149..26194223-chr7:26238891..26242307,10	MCF-7	breast:
29	chr12:110010777..110011505-chr7:26239952..26240920,2	Hela-S3	cervix:
30	chr2:26256338..26257133-chr7:26239844..26240418,2	Hela-S3	cervix:
31	chr2:46926271..46927170-chr7:26240072..26240761,2	Hela-S3	cervix:
32	chr4:87927957..87928647-chr7:26240156..26240755,2	NB4	blood:
33	chr11:2922805..2923664-chr7:26239878..26240792,2	Hela-S3	cervix:
34	chr7:26239911..26241819-chr7:26331558..26335355,4	K562	blood:
35	chr2:26467473..26468029-chr7:26239534..26240304,2	Hela-S3	cervix:
36	chr16:3184663..3185515-chr7:26239963..26240608,2	NB4	blood:
37	chr7:26238730..26241133-chr7:139024277..139026837,2	K562	blood:
38	chr1:46268308..46270413-chr7:26238840..26240934,2	MCF-7	breast:
39	chr3:196366467..196366970-chr7:26239838..26240427,2	NB4	blood:
40	chr1:89149775..89150423-chr7:26239336..26240301,2	Hela-S3	cervix:
41	chr17:79849226..79850154-chr7:26239906..26240558,2	Hela-S3	cervix:
42	chr15:65240582..65241132-chr7:26239339..26240082,2	Hela-S3	cervix:
43	chr2:105654731..105655647-chr7:26239723..26240386,2	Hela-S3	cervix:
44	chr7:25897759..25900219-chr7:26237473..26240299,2	MCF-7	breast:
45	chr7:26239878..26240463-chr7:116593578..116594221,2	Hela-S3	cervix:
46	chr10:35415823..35416627-chr7:26239448..26240181,2	Hela-S3	cervix:
47	chr3:150263710..150264373-chr7:26240125..26240710,2	Hela-S3	cervix:
48	chr11:62607633..62609133-chr7:26239521..26241061,2	K562	blood:
49	chr7:26239743..26240406-chr9:20683808..20684602,2	NB4	blood:
50	chr7:26096714..26102069-chr7:26240159..26243560,6	MCF-7	breast:

No data

Variant related genes	Relation type
CBX3	TF binding region
HNRNPA2B1	TF binding region
CBX3	CpG island
HNRNPA2B1	CpG island
ENSG00000120733	chromatin interactions
ENSG00000236778	chromatin interactions
ENSG00000197299	chromatin interactions
ENSG00000266430	chromatin interactions
ENSG00000220785	chromatin interactions
ENSG00000248925	chromatin interactions
ENSG00000100227	chromatin interactions
ENSG00000086300	chromatin interactions
ENSG00000160075	chromatin interactions
ENSG00000269955	chromatin interactions
ENSG00000065243	chromatin interactions
ENSG00000166451	chromatin interactions
ENSG00000063046	chromatin interactions
ENSG00000132141	chromatin interactions
ENSG00000146963	chromatin interactions
ENSG00000170515	chromatin interactions
ENSG00000255234	chromatin interactions
ENSG00000267680	chromatin interactions
ENSG00000212195	chromatin interactions
ENSG00000095261	chromatin interactions
ENSG00000272269	chromatin interactions
ENSG00000050344	chromatin interactions
ENSG00000144560	chromatin interactions
ENSG00000169813	chromatin interactions
ENSG00000225792	chromatin interactions
ENSG00000110514	chromatin interactions
ENSG00000167460	chromatin interactions
ENSG00000086015	chromatin interactions
ENSG00000116489	chromatin interactions
ENSG00000267002	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000084733	chromatin interactions
ENSG00000110921	chromatin interactions
ENSG00000147862	chromatin interactions
ENSG00000099860	chromatin interactions
ENSG00000180198	chromatin interactions
ENSG00000141552	chromatin interactions
ENSG00000249915	chromatin interactions
ENSG00000124789	chromatin interactions
ENSG00000151208	chromatin interactions
ENSG00000113407	chromatin interactions
ENSG00000134825	chromatin interactions
ENSG00000163964	chromatin interactions
ENSG00000224509	chromatin interactions
ENSG00000105193	chromatin interactions
ENSG00000085644	chromatin interactions
ENSG00000110628	chromatin interactions
ENSG00000183684	chromatin interactions
ENSG00000227477	chromatin interactions
ENSG00000199085	chromatin interactions
ENSG00000263072	chromatin interactions
ENSG00000171150	chromatin interactions
ENSG00000214188	chromatin interactions
ENSG00000007341	chromatin interactions
ENSG00000017260	chromatin interactions
ENSG00000172493	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000139428	chromatin interactions
ENSG00000095794	chromatin interactions
ENSG00000270022	chromatin interactions
ENSG00000101109	chromatin interactions
ENSG00000173207	chromatin interactions
ENSG00000196542	chromatin interactions
ENSG00000067225	chromatin interactions
ENSG00000215014	chromatin interactions
ENSG00000164898	chromatin interactions
ENSG00000143590	chromatin interactions
ENSG00000230534	chromatin interactions
ENSG00000188554	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000138029	chromatin interactions
ENSG00000174004	chromatin interactions
ENSG00000198755	chromatin interactions
ENSG00000170759	chromatin interactions
ENSG00000103121	chromatin interactions
ENSG00000120833	chromatin interactions
ENSG00000132475	chromatin interactions
ENSG00000162976	chromatin interactions
ENSG00000207601	chromatin interactions
ENSG00000137500	chromatin interactions
ENSG00000084754	chromatin interactions
ENSG00000102786	chromatin interactions
ENSG00000120742	chromatin interactions
ENSG00000113522	chromatin interactions
ENSG00000188352	chromatin interactions
ENSG00000145860	chromatin interactions
ENSG00000173486	chromatin interactions
ENSG00000063177	chromatin interactions
ENSG00000138668	chromatin interactions
ENSG00000121989	chromatin interactions
ENSG00000235159	chromatin interactions
ENSG00000227071	chromatin interactions
ENSG00000259736	chromatin interactions
ENSG00000226752	chromatin interactions
ENSG00000168496	chromatin interactions
ENSG00000206652	chromatin interactions
ENSG00000243147	chromatin interactions
ENSG00000225697	chromatin interactions

Extended variants
information (count: 36 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:36 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs535454513	chr7:26239851-26239852	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	47 gene(s)	Overlapped CNVs	n/a
2	rs555396062	chr7:26239875-26239876	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	50 gene(s)	Overlapped CNVs	n/a
3	rs568908392	chr7:26239876-26239877	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	50 gene(s)	Overlapped CNVs	n/a
4	rs570751786	chr7:26239879-26239880	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	52 gene(s)	Overlapped CNVs	n/a
5	rs189796414	chr7:26239881-26239882	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	52 gene(s)	Overlapped CNVs	n/a
6	rs557304664	chr7:26239883-26239884	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	52 gene(s)	Overlapped CNVs	n/a
7	rs577381042	chr7:26239903-26239904	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	56 gene(s)	Overlapped CNVs	n/a
8	rs546049938	chr7:26239905-26239906	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	56 gene(s)	Overlapped CNVs	n/a
9	rs149218467	chr7:26239922-26239923	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	60 gene(s)	Overlapped CNVs	n/a
10	rs573160144	chr7:26239928-26239929	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	62 gene(s)	Overlapped CNVs	n/a
11	rs541861090	chr7:26239946-26239947	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	64 gene(s)	Overlapped CNVs	n/a
12	rs35254059	chr7:26239949-26239950	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	64 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs530942916	chr7:26239960-26239961	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	69 gene(s)	Overlapped CNVs	n/a
14	rs544709672	chr7:26239981-26239982	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	71 gene(s)	Overlapped CNVs	n/a
15	rs118013246	chr7:26239993-26239994	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	72 gene(s)	Overlapped CNVs	n/a
16	rs533155794	chr7:26239994-26239995	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	72 gene(s)	Overlapped CNVs	n/a
17	rs538696426	chr7:26239996-26239997	Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Active TSS	TF binding region Chromatin interactive region	74 gene(s)	Overlapped CNVs	n/a
18	rs546778885	chr7:26240005-26240006	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	74 gene(s)	Overlapped CNVs	n/a
19	rs566816058	chr7:26240010-26240011	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	75 gene(s)	Overlapped CNVs	n/a
20	rs529200935	chr7:26240014-26240015	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	75 gene(s)	Overlapped CNVs	n/a
21	rs549029670	chr7:26240017-26240018	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	75 gene(s)	Overlapped CNVs	n/a
22	rs568817931	chr7:26240018-26240019	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	75 gene(s)	Overlapped CNVs	n/a
23	rs537408192	chr7:26240022-26240023	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	76 gene(s)	Overlapped CNVs	n/a
24	rs557853907	chr7:26240058-26240059	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	81 gene(s)	Overlapped CNVs	n/a
25	rs111761581	chr7:26240075-26240076	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	84 gene(s)	Overlapped CNVs	n/a
26	rs571205137	chr7:26240085-26240086	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	84 gene(s)	Overlapped CNVs	n/a
27	rs539653491	chr7:26240089-26240090	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	84 gene(s)	Overlapped CNVs	n/a
28	rs553141622	chr7:26240095-26240096	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	85 gene(s)	Overlapped CNVs	n/a
29	rs376517544	chr7:26240097-26240098	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	85 gene(s)	Overlapped CNVs	n/a
30	rs370045506	chr7:26240113-26240114	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	90 gene(s)	Overlapped CNVs	n/a
31	rs573247307	chr7:26240116-26240117	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	90 gene(s)	Overlapped CNVs	n/a
32	rs535725584	chr7:26240125-26240126	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	92 gene(s)	Overlapped CNVs	n/a
33	rs555606857	chr7:26240129-26240130	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region CpG island Chromatin interactive region	92 gene(s)	Overlapped CNVs	n/a
34	rs575617958	chr7:26240138-26240139	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	95 gene(s)	Overlapped CNVs	n/a
35	rs372622465	chr7:26240144-26240145	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	95 gene(s)	Overlapped CNVs	n/a
36	rs544233757	chr7:26240153-26240154	Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS	TF binding region Chromatin interactive region	95 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Non-syndromic sensorineural hearing loss	22570644	CNVD
Cancer	21183584	CNVD
abnormal development	18461090	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	21645411	CNVD
Lung adenocarcinoma	17086460	CNVD
Colorectal cancer	19455253	CNVD
Lung cancer	17086460	CNVD
Breast cancer	18852474	CNVD

Chromatin state (count:131 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:26233400-26242800	Transcr. at gene 5' and 3'	Primary T helper 17 cells PMA-I stimulated	--
2	chr7:26234200-26240400	Transcr. at gene 5' and 3'	Primary T regulatory cells fromperipheralblood	blood
3	chr7:26234800-26240000	Active TSS	Right Atrium	heart
4	chr7:26234800-26240200	Transcr. at gene 5' and 3'	iPS-20b Cell Line	embryonic stem cell
5	chr7:26236200-26245200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr7:26236600-26243600	Active TSS	Right Ventricle	heart
7	chr7:26236800-26242600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr7:26237000-26243000	Active TSS	Ovary	ovary
9	chr7:26237000-26243600	Active TSS	Aorta	Aorta
10	chr7:26237000-26244400	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr7:26237000-26245400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr7:26237200-26242200	Active TSS	Monocytes-CD14+_RO01746	blood
13	chr7:26237200-26242400	Active TSS	Colonic Mucosa	Colon
14	chr7:26237200-26242800	Active TSS	Breast Myoepithelial Primary Cells	Breast
15	chr7:26237200-26243400	Active TSS	Fetal Muscle Leg	muscle
16	chr7:26237200-26244000	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
17	chr7:26237200-26244400	Active TSS	Fetal Intestine Small	intestine
18	chr7:26237200-26244800	Active TSS	iPS-15b Cell Line	embryonic stem cell
19	chr7:26237200-26245000	Active TSS	Thymus	Thymus
20	chr7:26237400-26240000	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr7:26237400-26242600	Active TSS	Brain Angular Gyrus	brain
22	chr7:26237400-26242600	Active TSS	Brain Anterior Caudate	brain
23	chr7:26237400-26242600	Active TSS	Brain Hippocampus Middle	brain
24	chr7:26237400-26242600	Active TSS	Brain Inferior Temporal Lobe	brain
25	chr7:26237400-26242600	Active TSS	Duodenum Smooth Muscle	Duodenum
26	chr7:26237400-26242600	Active TSS	Fetal Kidney	kidney
27	chr7:26237400-26242600	Active TSS	Stomach Smooth Muscle	stomach
28	chr7:26237400-26242600	Active TSS	NHLF	lung
29	chr7:26237400-26242800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr7:26237400-26243000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
31	chr7:26237400-26243000	Active TSS	Rectal Smooth Muscle	rectum
32	chr7:26237400-26243400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
33	chr7:26237400-26244000	Active TSS	Duodenum Mucosa	Duodenum
34	chr7:26237400-26244000	Active TSS	Fetal Intestine Large	intestine
35	chr7:26237400-26244200	Active TSS	Fetal Stomach	stomach
36	chr7:26237400-26244200	Active TSS	Psoas Muscle	Psoas
37	chr7:26237400-26244600	Active TSS	H9 Cell Line	embryonic stem cell
38	chr7:26237400-26244600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
39	chr7:26237400-26244800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr7:26237600-26242200	Active TSS	Liver	Liver
41	chr7:26237600-26242400	Active TSS	Primary monocytes fromperipheralblood	blood
42	chr7:26237600-26242400	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
43	chr7:26237600-26242400	Active TSS	Primary T killer naive cells fromperipheralblood	blood
44	chr7:26237600-26242400	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
45	chr7:26237600-26242400	Active TSS	Adipose Nuclei	Adipose
46	chr7:26237600-26242400	Active TSS	Brain Cingulate Gyrus	brain
47	chr7:26237600-26242400	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
48	chr7:26237600-26242400	Active TSS	Brain Substantia Nigra	brain
49	chr7:26237600-26242400	Active TSS	Pancreatic Islets	Pancreatic Islet
50	chr7:26237600-26242600	Active TSS	Fetal Adrenal Gland	Adrenal Gland

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