Variant report
Variant | esv3327149 |
---|---|
Chromosome Location | chr11:84487054-84490352 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
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No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs532342108 | chr11:84487115-84487116 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
2 | rs547264457 | chr11:84487160-84487161 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
3 | rs562800272 | chr11:84487166-84487167 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
4 | rs191778379 | chr11:84487175-84487176 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
5 | rs544800357 | chr11:84487200-84487201 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
6 | rs559943313 | chr11:84487204-84487205 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
7 | rs145957567 | chr11:84487223-84487224 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
8 | rs184099564 | chr11:84487260-84487261 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
9 | rs567571140 | chr11:84487274-84487275 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
10 | rs188099522 | chr11:84487286-84487287 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
11 | rs545318580 | chr11:84487298-84487299 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
12 | rs139376389 | chr11:84487380-84487381 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
13 | rs555571335 | chr11:84487547-84487548 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
14 | rs558690936 | chr11:84487550-84487551 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
15 | rs538769549 | chr11:84487573-84487574 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
16 | rs558370069 | chr11:84487581-84487582 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
17 | rs567475280 | chr11:84487594-84487595 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
18 | rs567038487 | chr11:84487603-84487604 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
19 | rs534419098 | chr11:84487608-84487609 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
20 | rs555737593 | chr11:84487616-84487617 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
21 | rs574284492 | chr11:84487617-84487618 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
22 | rs537842991 | chr11:84487618-84487619 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
23 | rs556568397 | chr11:84487652-84487653 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
24 | rs540864623 | chr11:84487779-84487780 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
25 | rs192800186 | chr11:84487814-84487815 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
26 | rs185552495 | chr11:84487816-84487817 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
27 | rs560229002 | chr11:84487869-84487870 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
28 | rs571879698 | chr11:84487875-84487876 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs542414140 | chr11:84487882-84487883 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs78110190 | chr11:84487883-84487884 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs531670479 | chr11:84487935-84487936 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
32 | rs75950700 | chr11:84487968-84487969 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs549506310 | chr11:84487980-84487981 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs77788350 | chr11:84488028-84488029 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs532161713 | chr11:84488035-84488036 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs138781817 | chr11:84488102-84488103 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs565785540 | chr11:84488105-84488106 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs368642471 | chr11:84488141-84488142 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs79618763 | chr11:84488145-84488146 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs549595070 | chr11:84488183-84488184 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs567861528 | chr11:84488186-84488187 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs538557996 | chr11:84488206-84488207 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs556266553 | chr11:84488224-84488225 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs577581232 | chr11:84488231-84488232 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs538668751 | chr11:84488289-84488290 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs140207742 | chr11:84488293-84488294 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs386374368 | chr11:84488294-84488295 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs74724009 | chr11:84488295-84488296 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs200274060 | chr11:84488297-84488298 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs201121661 | chr11:84488298-84488299 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Medulloblastoma | 21979893 | CNVD |
Gastric cancer | 17908304 | CNVD |
Multiple myeloma | 20724749 | CNVD |
Wilms tumour | 21544195 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Intellectual disability | 22102821 | CNVD |
Autism | 22495311 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Cancer | 21637783 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Chronic lymphocytic leukemia | 21795749 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Neuroblastoma | 21484798 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 20837533 | CNVD |
Breast cancer | 21264507 | CNVD |
Cervical cancer | 21063398 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Liposarcoma | 21253554 | CNVD |
Neuroblastoma | 18923524 | CNVD |
Neuroblastoma | 18664255 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Multiple myeloma | 17077331 | CNVD |
Neuroblastoma | 17533364 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Multiple myeloma | 16461302 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Cancer | 16751803 | CNVD |
Seminomas | 18059402 | CNVD |
Cervical cancer | 21062161 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 17899364 | CNVD |
Breast cancer | 17157792 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Acute lymphoblastic leukemia | 21339820 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Cancer | 22429812 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Lung cancer | 18438408 | CNVD |
Breast cancer | 21364760 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Breast cancer | 16608533 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Melanoma | 18172304 | CNVD |
Acute lymphoblastic leukemia | 17690704 | CNVD |
Colorectal cancer | 16912164 | CNVD |
Mental retardation | 17847001 | CNVD |
Melanoma | 19509136 | CNVD |
Sudden cardiac death | 19188705 | CNVD |
Prostate cancer | 16573809 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Hepatocellular carcinoma | 16785998 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Breast cancer | 21858162 | CNVD |
Breast cancer | 21785460 | CNVD |
Cancer | 22183965 | CNVD |
Melanoma | 22183965 | CNVD |
Cancer | 20164920 | CNVD |
Obesity | 20622171 | CNVD |
Breast cancer | 22522925 | CNVD |
Developmental delay | 21147756 | CNVD |
Bipolar disorder | 19114987 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Ductal carcinoma | 22052326 | CNVD |
Breast cancer | 17142309 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr11:84484400-84492000 | Weak transcription | Fetal Brain Male | brain |