No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs149027682 |
chr19:39196735-39196736 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
2 |
rs11553600 |
chr19:39196736-39196737 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
3 |
rs3745859 |
chr19:39196745-39196746 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
4 |
rs571812757 |
chr19:39196746-39196747 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
5 |
rs202126611 |
chr19:39196750-39196751 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
6 |
rs145730643 |
chr19:39196776-39196777 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
7 |
rs60710743 |
chr19:39196782-39196783 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
8 |
rs200442845 |
chr19:39196794-39196795 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
9 |
rs555388589 |
chr19:39196821-39196822 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
10 |
rs567413755 |
chr19:39196858-39196859 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
11 |
rs537646804 |
chr19:39196903-39196904 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
12 |
rs556220518 |
chr19:39196920-39196921 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
13 |
rs577359710 |
chr19:39196921-39196922 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
14 |
rs138744742 |
chr19:39196938-39196939 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
15 |
rs553380979 |
chr19:39196985-39196986 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
16 |
rs571733186 |
chr19:39196986-39196987 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
17 |
rs374345491 |
chr19:39197017-39197018 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
18 |
rs112614234 |
chr19:39197018-39197019 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
19 |
rs183599374 |
chr19:39197057-39197058 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
20 |
rs188361522 |
chr19:39197080-39197081 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
21 |
rs35729716 |
chr19:39197102-39197103 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
22 |
rs12459757 |
chr19:39197172-39197173 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
23 |
rs543692435 |
chr19:39197193-39197194 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
24 |
rs371201099 |
chr19:39197235-39197236 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
25 |
rs8104815 |
chr19:39197310-39197311 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
26 |
rs367893114 |
chr19:39197345-39197346 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
27 |
rs74995758 |
chr19:39197386-39197387 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
28 |
rs8105055 |
chr19:39197502-39197503 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
29 |
rs566044261 |
chr19:39197513-39197514 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
30 |
rs8105069 |
chr19:39197527-39197528 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
31 |
rs549213060 |
chr19:39197530-39197531 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
32 |
rs8105080 |
chr19:39197552-39197553 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
33 |
rs181809445 |
chr19:39197584-39197585 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
34 |
rs6508814 |
chr19:39197585-39197586 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
35 |
rs570990140 |
chr19:39197640-39197641 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
36 |
rs11882006 |
chr19:39197643-39197644 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
37 |
rs142726826 |
chr19:39197722-39197723 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
38 |
rs8105216 |
chr19:39197729-39197730 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
39 |
rs8105550 |
chr19:39197773-39197774 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
40 |
rs549329775 |
chr19:39197808-39197809 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
41 |
rs542263985 |
chr19:39197847-39197848 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
42 |
rs147301485 |
chr19:39197895-39197896 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
43 |
rs576696202 |
chr19:39197925-39197926 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
44 |
rs35856174 |
chr19:39197954-39197955 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|
45 |
rs543681882 |
chr19:39197983-39197984 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
46 |
rs61432695 |
chr19:39197984-39197985 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
47 |
rs139231631 |
chr19:39198060-39198061 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
48 |
rs141599452 |
chr19:39198152-39198153 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
49 |
rs150898429 |
chr19:39198153-39198154 |
Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3' Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|
50 |
rs546819236 |
chr19:39198215-39198216 |
Strong transcription Weak transcription Genic enhancers Enhancers
|
TF binding regionChromatin interactive region
|
2 gene(s)
|
Overlapped CNVs
|
n/a
|