Variant report

Variant	esv3330502
Chromosome Location	chr15:52310485-52313033
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:868)
CpG islands
(count:552)
Chromatin interactive
region (count:36)
LncRNA
region (count:3)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:868 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:52312056-52312360	K562	blood:	n/a	n/a
2	ARID3A	chr15:52310974-52311277	K562	blood:	n/a	n/a
3	ARID3A	chr15:52311081-52311524	HepG2	liver:	n/a	chr15:52311459-52311467
4	ATF1	chr15:52310954-52311566	K562	blood:	n/a	n/a
5	ATF2	chr15:52311956-52312875	GM12878	blood:	n/a	n/a
6	ATF2	chr15:52311012-52311599	GM12878	blood:	n/a	n/a
7	ATF2	chr15:52310959-52311514	GM12878	blood:	n/a	n/a
8	ATF2	chr15:52311161-52311614	H1-hESC	embryonic stem cell:	n/a	n/a
9	ATF3	chr15:52311859-52312540	A549	lung:	n/a	chr15:52311904-52311913
10	ATF3	chr15:52311958-52312251	K562	blood:	n/a	n/a
11	ATF3	chr15:52311131-52311460	K562	blood:	n/a	chr15:52311283-52311292 chr15:52311374-52311387 chr15:52311405-52311414 chr15:52311377-52311387
12	ATF3	chr15:52311886-52312317	K562	blood:	n/a	chr15:52311904-52311913
13	BACH1	chr15:52311871-52312619	H1-hESC	embryonic stem cell:	n/a	n/a
14	BACH1	chr15:52311096-52311584	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr15:52312037-52313958	K562	blood:	n/a	chr15:52313523-52313537
16	BACH1	chr15:52310982-52311474	K562	blood:	n/a	n/a
17	BATF	chr15:52311099-52311435	GM12878	blood:	n/a	n/a
18	BCL11A	chr15:52311875-52312245	GM12878	blood:	n/a	chr15:52311906-52311919 chr15:52312011-52312020
19	BCL11A	chr15:52311042-52311473	GM12878	blood:	n/a	chr15:52311281-52311294 chr15:52311277-52311286 chr15:52311340-52311353 chr15:52311283-52311296
20	BCL3	chr15:52310761-52311607	A549	lung:	n/a	chr15:52311281-52311294 chr15:52311277-52311286 chr15:52311340-52311353 chr15:52311283-52311296
21	BCL3	chr15:52311837-52312655	A549	lung:	n/a	chr15:52311906-52311919 chr15:52312011-52312020
22	BCL3	chr15:52311909-52312505	A549	lung:	n/a	chr15:52312011-52312020
23	BCL3	chr15:52311089-52311640	GM12878	blood:	n/a	chr15:52311281-52311294 chr15:52311277-52311286 chr15:52311340-52311353 chr15:52311283-52311296
24	BCLAF1	chr15:52311865-52312579	GM12878	blood:	n/a	chr15:52311906-52311919 chr15:52312011-52312020
25	BCLAF1	chr15:52310997-52311760	GM12878	blood:	n/a	chr15:52311281-52311294 chr15:52311277-52311286 chr15:52311340-52311353 chr15:52311702-52311715 chr15:52311283-52311296
26	BHLHE40	chr15:52310814-52311605	A549	lung:	n/a	chr15:52311478-52311494
27	BHLHE40	chr15:52310882-52312332	HepG2	liver:	n/a	chr15:52311478-52311494 chr15:52311951-52311967 chr15:52311700-52311716 chr15:52311933-52311949
28	BHLHE40	chr15:52310828-52311631	GM12878	blood:	n/a	chr15:52311478-52311494
29	BHLHE40	chr15:52311860-52312388	GM12878	blood:	n/a	chr15:52311951-52311967 chr15:52311933-52311949
30	BHLHE40	chr15:52311136-52311539	HepG2	liver:	n/a	chr15:52311478-52311494
31	BHLHE40	chr15:52311138-52311476	HepG2	liver:	n/a	n/a
32	BHLHE40	chr15:52311891-52312320	A549	lung:	n/a	chr15:52311951-52311967 chr15:52311933-52311949
33	BHLHE40	chr15:52310778-52312460	K562	blood:	n/a	chr15:52311478-52311494 chr15:52311951-52311967 chr15:52311700-52311716 chr15:52311933-52311949
34	BRCA1	chr15:52311285-52311531	H1-hESC	embryonic stem cell:	n/a	n/a
35	BRCA1	chr15:52311044-52311463	HepG2	liver:	n/a	n/a
36	BRCA1	chr15:52311258-52311488	GM12878	blood:	n/a	n/a
37	BRCA1	chr15:52311081-52311574	Hela-S3	cervix:	n/a	n/a
38	CBX3	chr15:52310767-52311649	K562	blood:	n/a	n/a
39	CBX3	chr15:52311083-52311398	K562	blood:	n/a	n/a
40	CBX3	chr15:52311826-52312270	K562	blood:	n/a	n/a
41	CCNT2	chr15:52311013-52312350	K562	blood:	n/a	chr15:52311405-52311414
42	CEBPB	chr15:52310968-52311590	Hela-S3	cervix:	n/a	n/a
43	CEBPB	chr15:52311136-52311717	ECC-1	luminal epithelium:	n/a	n/a
44	CEBPB	chr15:52310763-52311427	GM12878	blood:	n/a	n/a
45	CEBPB	chr15:52311909-52312255	IMR90	lung:	n/a	n/a
46	CEBPB	chr15:52312859-52313884	IMR90	lung:	n/a	chr15:52313733-52313746 chr15:52313318-52313329
47	CEBPB	chr15:52312666-52313922	A549	lung:	n/a	chr15:52313733-52313746 chr15:52313318-52313329
48	CEBPB	chr15:52311884-52312263	A549	lung:	n/a	n/a
49	CEBPB	chr15:52310998-52312261	HepG2	liver:	n/a	n/a
50	CEBPB	chr15:52311902-52312243	HepG2	liver:	n/a	n/a

(count:552 , 50 per page) page: 1 2 3 4 5 6 7 ... 12

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:52311035-52311085	HMEC	breast:	n/a
2	chr15:52310788-52310838	Jurkat	blood:	n/a
3	chr15:52310788-52310838	SK-N-SH_RA	brain:	n/a
4	chr15:52311035-52311085	HMEC	breast:	n/a
5	chr15:52310788-52310838	Jurkat	blood:	n/a
6	chr15:52310788-52310838	SK-N-SH_RA	brain:	n/a
7	chr15:52311484-52311534	H1-hESC	embryonic stem cell:	embryo
8	chr15:52311221-52311271	BE2_C	brain:	n/a
9	chr15:52311380-52311430	GM12878	blood:	n/a
10	chr15:52311136-52311186	NHBE	bronchial:	n/a
11	chr15:52311136-52311186	PANC-1	pancreas:	n/a
12	chr15:52311631-52311681	GM12878	blood:	n/a
13	chr15:52310788-52310838	GM19239	blood:	n/a
14	chr15:52312166-52312216	NB4	blood:	n/a
15	chr15:52311136-52311186	CMK	blood:	n/a
16	chr15:52311221-52311271	SK-N-MC	brain:	n/a
17	chr15:52311221-52311271	Hepatocyte	liver:	n/a
18	chr15:52311484-52311534	HAEpiC	amniotic membrane:	n/a
19	chr15:52311221-52311271	HepG2	liver:	n/a
20	chr15:52311484-52311534	Caco-2	colon:	n/a
21	chr15:52311221-52311271	MCF-7	breast:	n/a
22	chr15:52312199-52312249	HUVEC	blood vessel:	n/a
23	chr15:52311631-52311681	HCM	heart:	n/a
24	chr15:52311221-52311271	HCM	heart:	n/a
25	chr15:52311221-52311271	PANC-1	pancreas:	n/a
26	chr15:52312199-52312249	GM06990	blood:	n/a
27	chr15:52312199-52312249	IMR90	lung:	fetal
28	chr15:52311035-52311085	SKMC	muscle:	n/a
29	chr15:52311484-52311534	ProgFib	skin:	n/a
30	chr15:52311035-52311085	HPAEpiC	pulmonary alveolar:	n/a
31	chr15:52311221-52311271	PFSK-1	brain:	n/a
32	chr15:52311380-52311430	Hela-S3	cervix:	n/a
33	chr15:52312199-52312249	K562	blood:	n/a
34	chr15:52311484-52311534	NHBE	bronchial:	n/a
35	chr15:52311035-52311085	AG09319	gingival:	n/a
36	chr15:52311484-52311534	SK-N-SH_RA	brain:	n/a
37	chr15:52312166-52312216	GM19239	blood:	n/a
38	chr15:52311380-52311430	ovcar-3	ovarian:	n/a
39	chr15:52311136-52311186	HEEpiC	esophagus:	n/a
40	chr15:52311136-52311186	BE2_C	brain:	n/a
41	chr15:52310788-52310838	H1-hESC	embryonic stem cell:	embryo
42	chr15:52312199-52312249	RPTEC	kidney:	n/a
43	chr15:52311136-52311186	NHDF-neo	bronchial:	n/a
44	chr15:52312199-52312249	AG10803	skin:	n/a
45	chr15:52312199-52312249	H1-hESC	embryonic stem cell:	embryo
46	chr15:52311631-52311681	HMEC	breast:	n/a
47	chr15:52311221-52311271	HCT-116	colon:	n/a
48	chr15:52311631-52311681	ovcar-3	ovarian:	n/a
49	chr15:52311484-52311534	GM12892	blood:	n/a
50	chr15:52311221-52311271	HAEpiC	amniotic membrane:	n/a

(count:36 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:52311231..52311963-chr2:198317889..198318505,2	Hela-S3	cervix:
2	chr15:52310998..52312915-chr15:52428801..52431088,2	MCF-7	breast:
3	chr15:52310752..52311563-chr15:80215677..80216555,2	Hela-S3	cervix:
4	chr15:52311211..52313546-chr15:52470591..52472771,2	MCF-7	breast:
5	chr15:52308069..52314807-chr15:52359242..52376066,34	MCF-7	breast:
6	chr11:9481906..9482892-chr15:52311101..52311641,2	Hela-S3	cervix:
7	chr15:50646379..50648105-chr15:52310964..52313763,2	MCF-7	breast:
8	chr1:150551175..150551879-chr15:52310855..52311822,2	Hela-S3	cervix:
9	chr15:52311715..52312306-chr19:55918738..55919688,2	Hela-S3	cervix:
10	chr15:52259207..52267788-chr15:52308373..52314434,24	MCF-7	breast:
11	chr15:52310337..52312699-chr15:76160460..76162429,2	MCF-7	breast:
12	chr1:149857624..149859887-chr15:52308865..52312483,3	MCF-7	breast:
13	chr1:153642946..153643631-chr15:52311398..52311917,2	Hela-S3	cervix:
14	chr15:52309194..52314432-chr15:52385325..52393461,10	MCF-7	breast:
15	chr15:52309643..52312109-chr15:52424380..52429568,4	MCF-7	breast:
16	chr1:186344295..186345189-chr15:52311029..52311907,2	Hela-S3	cervix:
17	chr15:51913842..51915651-chr15:52310480..52312908,3	MCF-7	breast:
18	chr15:52262145..52266701-chr15:52309209..52314377,19	MCF-7	breast:
19	chr15:52310228..52314421-chr15:52470196..52474583,10	MCF-7	breast:
20	chr15:52175882..52177402-chr15:52311052..52312787,2	K562	blood:
21	chr15:52311260..52311978-chr17:4851077..4851818,2	Hela-S3	cervix:
22	chr15:52312303..52314169-chr15:52430876..52432947,2	K562	blood:
23	chr14:75745847..75746397-chr15:52311405..52311940,2	Hela-S3	cervix:
24	chr15:52311192..52314853-chr15:52323962..52330649,8	K562	blood:
25	chr15:51914606..51918105-chr15:52309438..52311518,3	K562	blood:
26	chr15:52309956..52312123-chr15:52404856..52406463,2	MCF-7	breast:
27	chr15:52029435..52031649-chr15:52311154..52313570,2	K562	blood:
28	chr15:52311066..52311781-chr16:28564992..28565495,2	MCF-7	breast:
29	chr15:52262270..52265607-chr15:52309730..52314612,10	K562	blood:
30	chr12:76953528..76954278-chr15:52311179..52311706,2	Hela-S3	cervix:
31	chr15:52295927..52297599-chr15:52311444..52313673,3	MCF-7	breast:
32	chr13:113861573..113863819-chr15:52310834..52313167,2	MCF-7	breast:
33	chr15:52262263..52265564-chr15:52309489..52315686,9	K562	blood:
34	chr15:52310908..52311894-chr6:26158225..26159035,2	Hela-S3	cervix:
35	chr15:52311672..52313200-chr15:52431736..52434238,2	MCF-7	breast:
36	chr15:52309759..52313480-chr15:52429073..52432426,3	K562	blood:

(count:3 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-LEO1-3	chr15:52310896-52311292	ENSG00000259438.1
2	lnc-MAPK6-12	chr15:52312119-52312229	NONHSAT043903
3	lnc-MAPK6-12	chr15:52311435-52311573	NONHSAT043902

No data

Variant related genes	Relation type
MAPK6	TF binding region
ENSG00000259438	TF binding region
MAPK6	CpG island
ENSG00000259438	CpG island
ENSG00000143621	chromatin interactions
ENSG00000115520	chromatin interactions
ENSG00000108106	chromatin interactions
ENSG00000157181	chromatin interactions
ENSG00000184260	chromatin interactions
ENSG00000047410	chromatin interactions
ENSG00000244879	chromatin interactions
ENSG00000140280	chromatin interactions
ENSG00000268403	chromatin interactions
ENSG00000176476	chromatin interactions
ENSG00000180953	chromatin interactions
ENSG00000158373	chromatin interactions
ENSG00000166478	chromatin interactions
ENSG00000137875	chromatin interactions
ENSG00000259178	chromatin interactions
ENSG00000069966	chromatin interactions
ENSG00000259709	chromatin interactions
ENSG00000143384	chromatin interactions
ENSG00000259712	chromatin interactions
ENSG00000184678	chromatin interactions
ENSG00000178096	chromatin interactions
ENSG00000108515	chromatin interactions
ENSG00000184270	chromatin interactions
ENSG00000126226	chromatin interactions
ENSG00000242327	chromatin interactions
ENSG00000139842	chromatin interactions
ENSG00000259398	chromatin interactions
ENSG00000104093	chromatin interactions
ENSG00000259332	chromatin interactions
ENSG00000207484	chromatin interactions
ENSG00000069956	chromatin interactions
ENSG00000104064	chromatin interactions
ENSG00000091039	chromatin interactions
ENSG00000259577	chromatin interactions
ENSG00000166477	chromatin interactions
ENSG00000140367	chromatin interactions
ENSG00000170345	chromatin interactions

Extended variants
information (count: 97 )
Associated
traits (count: 57 )

Variant overlapped rSNPs/rCNVs (count:97 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs563487093	chr15:52310526-52310527	Weak transcription Enhancers Flanking Active TSS Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
2	rs537746756	chr15:52310652-52310653	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
3	rs571337585	chr15:52310656-52310657	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
4	rs575589351	chr15:52310678-52310679	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
5	rs540040698	chr15:52310680-52310681	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	15 gene(s)	Overlapped CNVs	n/a
6	rs558339694	chr15:52310752-52310753	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
7	rs369750102	chr15:52310798-52310799	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region	17 gene(s)	Overlapped CNVs	n/a
8	rs534220037	chr15:52310895-52310896	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	20 gene(s)	Overlapped CNVs	n/a
9	rs555761680	chr15:52310918-52310919	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	21 gene(s)	Overlapped CNVs	n/a
10	rs573938121	chr15:52310980-52310981	Active TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	23 gene(s)	Overlapped CNVs	n/a
11	rs546262075	chr15:52311013-52311014	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	23 gene(s)	Overlapped CNVs	n/a
12	rs564360219	chr15:52311021-52311022	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	23 gene(s)	Overlapped CNVs	n/a
13	rs146175320	chr15:52311053-52311054	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	Overlapped CNVs	n/a
14	rs528426117	chr15:52311058-52311059	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	Overlapped CNVs	n/a
15	rs556262932	chr15:52311117-52311118	Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Flanking Bivalent TSS/Enh	TF binding region Chromatin interactive region lncRNA	29 gene(s)	Overlapped CNVs	n/a
16	rs577669516	chr15:52311213-52311214	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	32 gene(s)	Overlapped CNVs	n/a
17	rs544812943	chr15:52311243-52311244	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	33 gene(s)	Overlapped CNVs	n/a
18	rs112045437	chr15:52311275-52311276	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	34 gene(s)	Overlapped CNVs	n/a
19	rs374659080	chr15:52311304-52311305	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	35 gene(s)	Overlapped CNVs	n/a
20	rs546789111	chr15:52311335-52311336	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	35 gene(s)	Overlapped CNVs	n/a
21	rs527631179	chr15:52311357-52311358	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	35 gene(s)	Overlapped CNVs	n/a
22	rs542540098	chr15:52311374-52311375	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	35 gene(s)	Overlapped CNVs	n/a
23	rs138608157	chr15:52311384-52311385	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	35 gene(s)	Overlapped CNVs	n/a
24	rs528943525	chr15:52311395-52311396	Active TSS Enhancers Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	35 gene(s)	Overlapped CNVs	n/a
25	rs529887430	chr15:52311406-52311407	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	37 gene(s)	Overlapped CNVs	n/a
26	rs549749720	chr15:52311413-52311414	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	37 gene(s)	Overlapped CNVs	n/a
27	rs368960089	chr15:52311424-52311425	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	37 gene(s)	Overlapped CNVs	n/a
28	rs571371244	chr15:52311432-52311433	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	37 gene(s)	Overlapped CNVs	n/a
29	rs532232218	chr15:52311451-52311452	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
30	rs552048264	chr15:52311455-52311456	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
31	rs111298920	chr15:52311474-52311475	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
32	rs534544966	chr15:52311475-52311476	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
33	rs555802994	chr15:52311476-52311477	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
34	rs190614223	chr15:52311492-52311493	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
35	rs11550439	chr15:52311511-52311512	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
36	rs373474524	chr15:52311524-52311525	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
37	rs568898530	chr15:52311537-52311538	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
38	rs182123684	chr15:52311561-52311562	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	38 gene(s)	Overlapped CNVs	n/a
39	rs556099136	chr15:52311598-52311599	Active TSS Bivalent/Poised TSS Flanking Active TSS Weak transcription Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region	36 gene(s)	Overlapped CNVs	n/a
40	rs577756118	chr15:52311603-52311604	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	36 gene(s)	Overlapped CNVs	n/a
41	rs111472441	chr15:52311620-52311621	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	36 gene(s)	Overlapped CNVs	n/a
42	rs113048394	chr15:52311700-52311701	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	34 gene(s)	Overlapped CNVs	n/a
43	rs553580830	chr15:52311756-52311757	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	34 gene(s)	Overlapped CNVs	n/a
44	rs572162442	chr15:52311796-52311797	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
45	rs187215270	chr15:52311811-52311812	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
46	rs561027598	chr15:52311814-52311815	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	33 gene(s)	Overlapped CNVs	n/a
47	rs111792511	chr15:52311849-52311850	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	32 gene(s)	Overlapped CNVs	n/a
48	rs12910416	chr15:52311856-52311857	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	32 gene(s)	Overlapped CNVs	n/a
49	rs576245152	chr15:52311867-52311868	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	32 gene(s)	Overlapped CNVs	n/a
50	rs12910421	chr15:52311869-52311870	Active TSS Bivalent/Poised TSS Weak transcription	TF binding region Chromatin interactive region	32 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:57)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	22032731	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Myelofibrosis	22110671	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD

Chromatin state (count:468 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:52299400-52310800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr15:52299600-52310600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr15:52299600-52310800	Weak transcription	HSMMtube	muscle
4	chr15:52301400-52310800	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr15:52301400-52310800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr15:52301400-52310800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
7	chr15:52301400-52310800	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr15:52303600-52310800	Weak transcription	Pancreas	Pancrea
9	chr15:52303600-52310800	Weak transcription	Right Atrium	heart
10	chr15:52303800-52310600	Weak transcription	Osteobl	bone
11	chr15:52304400-52310600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr15:52304400-52310800	Weak transcription	Fetal Muscle Leg	muscle
13	chr15:52304400-52310800	Weak transcription	Left Ventricle	heart
14	chr15:52304400-52310800	Weak transcription	Lung	lung
15	chr15:52304400-52310800	Weak transcription	Psoas Muscle	Psoas
16	chr15:52304400-52310800	Weak transcription	Skeletal Muscle Female	skeletal muscle
17	chr15:52304600-52310800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
18	chr15:52304600-52310800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
19	chr15:52304600-52310800	Weak transcription	Brain Germinal Matrix	brain
20	chr15:52304600-52310800	Weak transcription	Rectal Smooth Muscle	rectum
21	chr15:52304800-52310600	Weak transcription	Adipose Nuclei	Adipose
22	chr15:52304800-52310600	Weak transcription	Brain Angular Gyrus	brain
23	chr15:52304800-52310800	Weak transcription	Cortex derived primary cultured neurospheres	brain
24	chr15:52304800-52310800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
25	chr15:52304800-52310800	Weak transcription	Brain Anterior Caudate	brain
26	chr15:52304800-52310800	Weak transcription	Brain Inferior Temporal Lobe	brain
27	chr15:52304800-52310800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
28	chr15:52304800-52310800	Weak transcription	Brain Substantia Nigra	brain
29	chr15:52305600-52310600	Weak transcription	Colon Smooth Muscle	Colon
30	chr15:52305800-52310600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
31	chr15:52306000-52310600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr15:52306000-52310600	Weak transcription	HSMM	muscle
33	chr15:52306000-52310600	Weak transcription	HUVEC	blood vessel
34	chr15:52306000-52310600	Weak transcription	NHDF-Ad	bronchial
35	chr15:52306200-52310600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
36	chr15:52306200-52310600	Weak transcription	A549	lung
37	chr15:52306200-52310600	Weak transcription	NHEK	skin
38	chr15:52306200-52310800	Weak transcription	Primary T cells from cord blood	blood
39	chr15:52306400-52310600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr15:52306400-52310600	Weak transcription	Primary T helper cells PMA-I stimulated	--
41	chr15:52306400-52310600	Weak transcription	Hela-S3	cervix
42	chr15:52306400-52310600	Weak transcription	HMEC	breast
43	chr15:52306400-52310800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
44	chr15:52306600-52310800	Weak transcription	Primary B cells from cord blood	blood
45	chr15:52306800-52310800	Weak transcription	Sigmoid Colon	Sigmoid Colon
46	chr15:52307400-52310600	Weak transcription	GM12878-XiMat	blood
47	chr15:52307800-52310800	Weak transcription	Duodenum Smooth Muscle	Duodenum
48	chr15:52309000-52310600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
49	chr15:52309200-52310600	Weak transcription	Primary monocytes fromperipheralblood	blood
50	chr15:52309200-52310600	Weak transcription	Monocytes-CD14+_RO01746	blood

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