Variant report

Variant esv3330508
Chromosome Location chr13:90401807-90835334
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:368 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr13:90387200-90402400 Weak transcription Hela-S3 cervix
2 chr13:90401200-90406200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr13:90401400-90408000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr13:90401600-90402600 Enhancers HUVEC blood vessel
5 chr13:90402000-90402800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr13:90402200-90402600 Enhancers Muscle Satellite Cultured Cells --
7 chr13:90402400-90402600 Enhancers Hela-S3 cervix
8 chr13:90402400-90402800 Active TSS Primary T helper cells PMA-I stimulated --
9 chr13:90403600-90404200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
10 chr13:90406200-90406400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr13:90406400-90406600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr13:90406600-90406800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr13:90406800-90408800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr13:90408000-90408600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr13:90408600-90415600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr13:90414200-90415800 Enhancers HUVEC blood vessel
17 chr13:90414800-90415800 Enhancers NH-A brain
18 chr13:90415200-90416000 Enhancers Hela-S3 cervix
19 chr13:90415600-90415800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr13:90418400-90419400 Enhancers HUES48 Cell Line embryonic stem cell
21 chr13:90419000-90419400 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr13:90425200-90425600 Enhancers HUVEC blood vessel
23 chr13:90431600-90438600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr13:90433800-90434200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr13:90435600-90435800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
26 chr13:90435600-90435800 Bivalent Enhancer Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr13:90435600-90436000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr13:90435800-90437000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr13:90436000-90436400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr13:90436400-90436800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr13:90436600-90437000 Active TSS Gastric stomach
32 chr13:90443400-90443800 Enhancers iPS-20b Cell Line embryonic stem cell
33 chr13:90443600-90444000 Enhancers iPS-18 Cell Line embryonic stem cell
34 chr13:90460000-90460400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
35 chr13:90464400-90466000 Enhancers HUVEC blood vessel
36 chr13:90465200-90465800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr13:90465800-90466000 ZNF genes & repeats ES-WA7 Cell Line embryonic stem cell
38 chr13:90468200-90468600 Enhancers Cortex derived primary cultured neurospheres brain
39 chr13:90474600-90475000 Enhancers Brain Cingulate Gyrus brain
40 chr13:90474600-90475200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
41 chr13:90474800-90475000 Enhancers A549 lung
42 chr13:90475000-90479800 Weak transcription Brain Cingulate Gyrus brain
43 chr13:90475200-90479800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
44 chr13:90479400-90480000 Enhancers Brain Angular Gyrus brain
45 chr13:90479400-90480400 Enhancers Brain Inferior Temporal Lobe brain
46 chr13:90479800-90480000 Active TSS Brain Anterior Caudate brain
47 chr13:90479800-90480200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
48 chr13:90479800-90480200 Enhancers Brain Cingulate Gyrus brain
49 chr13:90479800-90480200 Enhancers Brain Hippocampus Middle brain
50 chr13:90479800-90480400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived

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