Variant report

Variant	esv3331626
Chromosome Location	chr11:106159692-106161990
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 110 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:110 , 50 per page) page: 1 2 3

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs567233425	chr11:106159703-106159704	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs537416362	chr11:106159713-106159714	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs186742299	chr11:106159742-106159743	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs138827027	chr11:106159755-106159756	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs112759084	chr11:106159795-106159796	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs115447231	chr11:106159835-106159836	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs543549302	chr11:106159848-106159849	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs554007885	chr11:106159849-106159850	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs572189262	chr11:106159850-106159851	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs535189	chr11:106159886-106159887	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs80040592	chr11:106159948-106159949	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs531852673	chr11:106159983-106159984	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs141939932	chr11:106160020-106160021	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs564946578	chr11:106160032-106160033	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs532619705	chr11:106160076-106160077	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs547729997	chr11:106160125-106160126	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs371817853	chr11:106160137-106160138	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs192613015	chr11:106160167-106160168	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs530260571	chr11:106160174-106160175	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs548787137	chr11:106160209-106160210	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs541530715	chr11:106160306-106160307	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs567215729	chr11:106160315-106160316	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs551968249	chr11:106160351-106160352	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs537958195	chr11:106160400-106160401	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs139827066	chr11:106160407-106160408	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs71041660	chr11:106160427-106160428	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs199904267	chr11:106160428-106160429	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs201211732	chr11:106160431-106160432	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs7478766	chr11:106160432-106160433	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs200727331	chr11:106160434-106160435	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs201695572	chr11:106160436-106160437	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs200649339	chr11:106160438-106160439	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs373229978	chr11:106160441-106160442	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs377315235	chr11:106160442-106160443	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs370700430	chr11:106160444-106160445	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs374575484	chr11:106160447-106160448	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs556151432	chr11:106160450-106160451	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs71041661	chr11:106160451-106160452	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs571311910	chr11:106160456-106160457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs368477165	chr11:106160476-106160477	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs11226992	chr11:106160492-106160493	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs577564962	chr11:106160505-106160506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs368913786	chr11:106160506-106160507	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs558778983	chr11:106160513-106160514	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs11226993	chr11:106160518-106160519	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs561235045	chr11:106160519-106160520	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs11226994	chr11:106160544-106160545	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs543475803	chr11:106160545-106160546	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs181724948	chr11:106160547-106160548	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs11226995	chr11:106160555-106160556	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Intellectual disability	22102821	CNVD
Autism	22495311	CNVD
Acute myeloid leukemia	20729466	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Glioblastoma multiforme	21080181	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Cervical cancer	21062161	CNVD
Esophageal squamous carcinoma	18350619	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	22429812	CNVD
Breast cancer	16608533	CNVD
T-cell lymphomas	19863542	CNVD
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Basal cell lymphoma	17053054	CNVD
Hepatocellular carcinoma	16785998	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21785460	CNVD
Breast cancer	21958427	CNVD
Lung cancer	18438408	CNVD
Ewing''s sarcoma	17952124	CNVD
Renal cell carcinoma	18194544	CNVD
Breast cancer	17133270	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	17603634	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Basal cell lymphoma	16790693	CNVD
Chronic lymphocytic leukemia	21670202	CNVD
Breast cancer	21364760	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Mental retardation	19966786	CNVD
Non-small cell lung cancer	21829676	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Intracranial aneurysm	16715129	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Urothelial carcinoma	21177765	CNVD
Myelofibrosis	22110671	CNVD
Ovarian cancer	21720365	CNVD
Chronic lymphocytic leukemia	17805327	CNVD
Glioblastoma multiforme	22286061	CNVD
Breast cancer	16397240	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Neuroblastoma	17327916	CNVD
Esophageal adenocarcinoma	18519675	CNVD
Esophageal squamous carcinoma	17470683	CNVD
Mantle cell lymphoma	19029149	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Malignant melanoma	17260012	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Prostate cancer	16573809	CNVD
Obesity	19966786	CNVD
Prostate cancer	18632612	CNVD
Melanoma	17363583	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106157600-106159800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr11:106158800-106160000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr11:106159600-106159800	Enhancers	NHDF-Ad	bronchial
4	chr11:106159600-106160000	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr11:106159600-106160000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr11:106159800-106160000	Enhancers	Aorta	Aorta
7	chr11:106160000-106162400	Weak transcription	Aorta	Aorta

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