Variant report

Variant	esv3332234
Chromosome Location	chr10:26853285-26881775
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:318)
CpG islands
(count:856)
Chromatin interactive
region (count:2)
LncRNA
region (count:16)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:318 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:26860686-26860731	HepG2	liver:	n/a	n/a
2	ATF2	chr10:26863637-26864211	GM12878	blood:	n/a	n/a
3	ATF2	chr10:26863707-26864194	GM12878	blood:	n/a	n/a
4	ATF3	chr10:26863854-26863990	GM12878	blood:	n/a	n/a
5	BATF	chr10:26863751-26864136	GM12878	blood:	n/a	n/a
6	BATF	chr10:26863697-26864149	GM12878	blood:	n/a	n/a
7	BATF	chr10:26862524-26862900	GM12878	blood:	n/a	n/a
8	BATF	chr10:26862573-26862909	GM12878	blood:	n/a	n/a
9	BCL11A	chr10:26862584-26862977	GM12878	blood:	n/a	n/a
10	BCL11A	chr10:26863793-26864021	GM12878	blood:	n/a	n/a
11	BCL11A	chr10:26863648-26864087	GM12878	blood:	n/a	n/a
12	BCLAF1	chr10:26863786-26864104	GM12878	blood:	n/a	n/a
13	BCLAF1	chr10:26863717-26864158	GM12878	blood:	n/a	n/a
14	BHLHE40	chr10:26862634-26862906	GM12878	blood:	n/a	n/a
15	BHLHE40	chr10:26863731-26864167	GM12878	blood:	n/a	n/a
16	CEBPB	chr10:26860697-26860884	HepG2	liver:	n/a	chr10:26860826-26860837
17	CEBPB	chr10:26874087-26874199	A549	lung:	n/a	n/a
18	CEBPB	chr10:26860649-26861015	IMR90	lung:	n/a	chr10:26860826-26860837
19	CEBPB	chr10:26860662-26861015	A549	lung:	n/a	chr10:26860826-26860837
20	CEBPB	chr10:26860641-26861006	HepG2	liver:	n/a	chr10:26860826-26860837
21	CEBPB	chr10:26860675-26860976	K562	blood:	n/a	chr10:26860826-26860837
22	CEBPB	chr10:26860646-26861004	MCF-7	breast:	n/a	chr10:26860826-26860837
23	CHD1	chr10:26862678-26862878	GM12878	blood:	n/a	n/a
24	CHD2	chr10:26862700-26862938	GM12878	blood:	n/a	n/a
25	CHD2	chr10:26862199-26862219	GM12878	blood:	n/a	n/a
26	CREB1	chr10:26863824-26864151	GM12878	blood:	n/a	n/a
27	CTCF	chr10:26855640-26855790	WERI-Rb-1	eye:	n/a	n/a
28	CTCF	chr10:26862660-26862810	GM12873	blood:	n/a	n/a
29	CTCF	chr10:26862718-26862885	Hela-S3	cervix:	n/a	n/a
30	CTCF	chr10:26862660-26862810	GM12864	blood:	n/a	n/a
31	CTCF	chr10:26862707-26862935	MCF-7	breast:	n/a	n/a
32	CTCF	chr10:26862740-26862890	GM12871	blood:	n/a	n/a
33	CTCF	chr10:26875103-26875180	H1-hESC	embryonic stem cell:	n/a	n/a
34	CTCF	chr10:26862660-26862810	GM06990	blood:	n/a	n/a
35	CTCF	chr10:26862866-26862870	Spleen_OC	spleen:	n/a	n/a
36	CTCF	chr10:26862769-26862889	GM12891	blood:	n/a	n/a
37	CTCF	chr10:26862740-26862890	GM12872	blood:	n/a	n/a
38	CTCF	chr10:26862725-26862859	ProgFib	skin:	n/a	n/a
39	CTCF	chr10:26862660-26862810	GM12865	blood:	n/a	n/a
40	CTCF	chr10:26862720-26862870	Caco-2	colon:	n/a	n/a
41	CTCF	chr10:26862820-26862829	Spleen_OC	spleen:	n/a	n/a
42	CTCF	chr10:26862743-26862918	H1-hESC	embryonic stem cell:	n/a	n/a
43	CTCF	chr10:26862660-26862810	BJ	skin:	n/a	n/a
44	CTCF	chr10:26862660-26862810	GM12870	blood:	n/a	n/a
45	CTCF	chr10:26862720-26862870	HepG2	liver:	n/a	n/a
46	CTCF	chr10:26862700-26862850	GM12869	blood:	n/a	n/a
47	CTCF	chr10:26868784-26868857	K562	blood:	n/a	chr10:26868810-26868831 chr10:26868811-26868824 chr10:26868809-26868825 chr10:26868808-26868826
48	CTCF	chr10:26862663-26862869	H1-hESC	embryonic stem cell:	n/a	n/a
49	CTCF	chr10:26862780-26862930	AoAF	blood vessel:	n/a	n/a
50	CTCF	chr10:26862660-26862810	GM12874	blood:	n/a	n/a

(count:856 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:26878629-26878679	SK-N-SH	brain:	n/a
2	chr10:26853625-26853675	RPTEC	kidney:	n/a
3	chr10:26878629-26878679	SK-N-SH	brain:	n/a
4	chr10:26853625-26853675	RPTEC	kidney:	n/a
5	chr10:26856095-26856145	SK-N-SH	brain:	n/a
6	chr10:26878627-26878677	SKMC	muscle:	n/a
7	chr10:26856128-26856178	MCF10A-Er-Src	breast:	n/a
8	chr10:26856664-26856714	ProgFib	skin:	n/a
9	chr10:26878629-26878679	HRPEpiC	eye:	n/a
10	chr10:26877803-26877853	A549	lung:	n/a
11	chr10:26878627-26878677	HCF	heart:	n/a
12	chr10:26856095-26856145	HNPCEpiC	eye:	n/a
13	chr10:26877716-26877766	Jurkat	blood:	n/a
14	chr10:26858394-26858444	HAEpiC	amniotic membrane:	n/a
15	chr10:26858394-26858444	U87	brain:	n/a
16	chr10:26877716-26877766	HAEpiC	amniotic membrane:	n/a
17	chr10:26877716-26877766	GM12878	blood:	n/a
18	chr10:26877716-26877766	ProgFib	skin:	n/a
19	chr10:26856095-26856145	AoSMC	blood vessel:	n/a
20	chr10:26856128-26856178	HNPCEpiC	eye:	n/a
21	chr10:26878632-26878682	MCF-7	breast:	n/a
22	chr10:26856128-26856178	NH-A	brain:	n/a
23	chr10:26878632-26878682	ECC-1	luminal epithelium:	n/a
24	chr10:26855907-26855957	MCF-7	breast:	n/a
25	chr10:26856454-26856504	Jurkat	blood:	n/a
26	chr10:26878632-26878682	RPTEC	kidney:	n/a
27	chr10:26877716-26877766	NHDF-neo	bronchial:	n/a
28	chr10:26856454-26856504	NHDF-neo	bronchial:	n/a
29	chr10:26877803-26877853	BE2_C	brain:	n/a
30	chr10:26853625-26853675	BJ	skin:	n/a
31	chr10:26878632-26878682	HepG2	liver:	n/a
32	chr10:26858394-26858444	LNCaP	prostate:	n/a
33	chr10:26878629-26878679	PrEC	prostate:	n/a
34	chr10:26856664-26856714	HAEpiC	amniotic membrane:	n/a
35	chr10:26856664-26856714	HEK293	kidney:	embryo
36	chr10:26878629-26878679	AG09319	gingival:	n/a
37	chr10:26878627-26878677	NHDF-neo	bronchial:	n/a
38	chr10:26856454-26856504	HCM	heart:	n/a
39	chr10:26856105-26856155	NT2-D1	testis:	n/a
40	chr10:26855907-26855957	PFSK-1	brain:	n/a
41	chr10:26855907-26855957	HepG2	liver:	n/a
42	chr10:26856095-26856145	GM12878	blood:	n/a
43	chr10:26855907-26855957	HPAEpiC	pulmonary alveolar:	n/a
44	chr10:26877716-26877766	A549	lung:	n/a
45	chr10:26856095-26856145	NHBE	bronchial:	n/a
46	chr10:26877515-26877565	HepG2	liver:	n/a
47	chr10:26878627-26878677	SK-N-SH	brain:	n/a
48	chr10:26856105-26856155	AG10803	skin:	n/a
49	chr10:26856095-26856145	Hela-S3	cervix:	n/a
50	chr10:26855907-26855957	PANC-1	pancreas:	n/a

(count:2 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:26854569..26856089-chrX:118738967..118740548,2	MCF-7	breast:
2	chr10:26848889..26850459-chr10:26851524..26854140,2	K562	blood:

(count:16 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PDSS1-1	chr10:26870673-26871754	NONHSAT011834
2	lnc-APBB1IP-1	chr10:26880239-26880342	XLOC_008419
3	lnc-APBB1IP-1	chr10:26878993-26879266	XLOC_008419
4	lnc-ABI1-4	chr10:26853755-26854134	ENSG00000246873
5	lnc-ABI1-4	chr10:26854421-26855838	ENSG00000246873
6	lnc-APBB1IP-1	chr10:26876526-26877939	XLOC_008419
7	lnc-APBB1IP-1	chr10:26880239-26880342	XLOC_008419
8	lnc-APBB1IP-1	chr10:26880239-26880342	XLOC_008419
9	lnc-PDSS1-1	chr10:26878794-26879266	NR_026793
10	lnc-PDSS1-1	chr10:26879025-26879266	NONHSAT011840
11	lnc-APBB1IP-1	chr10:26878993-26879266	XLOC_008419
12	lnc-PDSS1-7	chr10:26853755-26854138	NONHSAT011828
13	lnc-APBB1IP-1	chr10:26879064-26879266	XLOC_008419
14	lnc-ABI1-9	chr10:26859887-26860230	NONHSAT011829
15	lnc-PDSS1-7	chr10:26854425-26855838	NONHSAT011828
16	lnc-PDSS1-1	chr10:26880239-26880342	NR_026793

No data

Variant related genes	Relation type
ENSG00000236894	TF binding region
LINC00264	TF binding region
ENSG00000236894	CpG island
LINC00264	CpG island
ENSG00000186416	chromatin interactions
RAB11FIP5	miRNA target sites
ZNF367	miRNA target sites
ZNF365	miRNA target sites

Extended variants
information (count: 1548 )
Associated
traits (count: 43 )

Variant overlapped rSNPs/rCNVs (count:1548 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs78818810	chr10:26853335-26853336	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs74742596	chr10:26853337-26853338	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs533539377	chr10:26853407-26853408	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs1753337	chr10:26853458-26853459	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs188129534	chr10:26853507-26853508	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs542159563	chr10:26853584-26853585	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs562143403	chr10:26853623-26853624	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs151304348	chr10:26853639-26853640	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs1775227	chr10:26853706-26853707	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs570959143	chr10:26853718-26853719	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs554592227	chr10:26853733-26853734	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs200555047	chr10:26853734-26853735	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs533423403	chr10:26853737-26853738	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs180930820	chr10:26853785-26853786	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
15	rs529569892	chr10:26853834-26853835	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
16	rs569860397	chr10:26853844-26853845	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
17	rs535769186	chr10:26853855-26853856	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
18	rs76826897	chr10:26853891-26853892	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
19	rs77327566	chr10:26853942-26853943	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
20	rs35240808	chr10:26853969-26853970	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
21	rs76376851	chr10:26853989-26853990	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
22	rs548246858	chr10:26854000-26854001	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
23	rs557285466	chr10:26854006-26854007	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
24	rs186357616	chr10:26854011-26854012	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
25	rs140569587	chr10:26854021-26854022	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
26	rs189586594	chr10:26854053-26854054	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
27	rs150450819	chr10:26854060-26854061	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
28	rs542547392	chr10:26854061-26854062	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
29	rs562262036	chr10:26854118-26854119	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
30	rs374943786	chr10:26854165-26854166	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs138557816	chr10:26854170-26854171	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs148848585	chr10:26854204-26854205	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs533509979	chr10:26854205-26854206	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs550273499	chr10:26854218-26854219	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs563532793	chr10:26854220-26854221	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs529093283	chr10:26854247-26854248	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs549133114	chr10:26854250-26854251	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs536756552	chr10:26854262-26854263	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs556612091	chr10:26854405-26854406	Weak transcription Strong transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs75814586	chr10:26854496-26854497	Weak transcription Strong transcription ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
41	rs568097725	chr10:26854596-26854597	Weak transcription Strong transcription ZNF genes & repeats	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs181683564	chr10:26854642-26854643	Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs551004432	chr10:26854676-26854677	Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs570908449	chr10:26854681-26854682	Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs187146298	chr10:26854722-26854723	Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs556625081	chr10:26854724-26854725	Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs573647774	chr10:26854743-26854744	Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
48	rs535694354	chr10:26854752-26854753	Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
49	rs555886747	chr10:26854810-26854811	Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs572687576	chr10:26854866-26854867	Weak transcription Strong transcription	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:43)

Disease	PMID	Source
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
T-cell lymphomas	19863542	CNVD
Esophageal cancer	21851588	CNVD
small cell lung cancer	20016488	CNVD
Behavioral abnormalities	21522184	CNVD
Dysmorphic features	21522184	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Myelofibrosis	22110671	CNVD
Autism	21439084	CNVD
Maculopathy	20981449	CNVD
Ovine squamous-cell carcinoma	17599052	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Adrenocortical carcinoma	18281524	CNVD
Breast cancer	21364760	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
abnormal development	18461090	CNVD

Chromatin state (count:360 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:26802200-26853400	Weak transcription	Sigmoid Colon	Sigmoid Colon
2	chr10:26834800-26858400	Strong transcription	Dnd41	blood
3	chr10:26839400-26854200	Strong transcription	Primary T cells from cord blood	blood
4	chr10:26839600-26860800	Strong transcription	Primary T cells fromperipheralblood	blood
5	chr10:26839800-26861200	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
6	chr10:26840000-26860000	Strong transcription	Primary B cells from peripheral blood	blood
7	chr10:26840200-26855200	Weak transcription	Placenta	Placenta
8	chr10:26840200-26863200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr10:26845000-26855600	Weak transcription	Esophagus	oesophagus
10	chr10:26845200-26853600	Strong transcription	Thymus	Thymus
11	chr10:26845400-26863000	Strong transcription	Primary T helper cells fromperipheralblood	blood
12	chr10:26846000-26854000	Weak transcription	Duodenum Smooth Muscle	Duodenum
13	chr10:26846000-26859600	Strong transcription	Primary B cells from cord blood	blood
14	chr10:26846200-26859000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr10:26846400-26860800	Strong transcription	Monocytes-CD14+_RO01746	blood
16	chr10:26846400-26861600	Strong transcription	Primary monocytes fromperipheralblood	blood
17	chr10:26846600-26858200	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr10:26846600-26858400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
19	chr10:26846600-26859600	Strong transcription	Primary hematopoietic stem cells short term culture	blood
20	chr10:26846600-26860800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
21	chr10:26846800-26859400	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr10:26846800-26861200	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
23	chr10:26846800-26863000	Strong transcription	Primary neutrophils fromperipheralblood	blood
24	chr10:26847200-26854000	Weak transcription	Osteobl	bone
25	chr10:26847600-26857400	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr10:26848200-26861000	Strong transcription	Primary T helper cells PMA-I stimulated	--
27	chr10:26848400-26863000	Strong transcription	Fetal Thymus	thymus
28	chr10:26848600-26855600	Weak transcription	Gastric	stomach
29	chr10:26848800-26855400	Strong transcription	Primary hematopoietic stem cells	blood
30	chr10:26848800-26857800	Strong transcription	Liver	Liver
31	chr10:26849000-26854800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr10:26849000-26855000	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood
33	chr10:26849000-26855400	Strong transcription	Primary T killer memory cells from peripheral blood	blood
34	chr10:26849000-26855600	Strong transcription	Adipose Nuclei	Adipose
35	chr10:26849000-26857600	Strong transcription	Primary T helper naive cells from peripheral blood	blood
36	chr10:26849000-26859000	Strong transcription	GM12878-XiMat	blood
37	chr10:26849000-26860600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr10:26849200-26855400	Strong transcription	Primary T helper memory cells from peripheral blood 1	blood
39	chr10:26849200-26855400	Strong transcription	Primary T killer naive cells fromperipheralblood	blood
40	chr10:26849400-26855600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr10:26849400-26855600	Weak transcription	Pancreas	Pancrea
42	chr10:26849600-26855400	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
43	chr10:26849800-26853400	Weak transcription	Lung	lung
44	chr10:26849800-26853800	Weak transcription	Rectal Smooth Muscle	rectum
45	chr10:26852200-26853400	Weak transcription	Spleen	Spleen
46	chr10:26852200-26853800	Weak transcription	Duodenum Mucosa	Duodenum
47	chr10:26853000-26854000	Strong transcription	Rectal Mucosa Donor 29	rectum
48	chr10:26853000-26855600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
49	chr10:26853400-26854600	Strong transcription	Lung	lung
50	chr10:26853400-26855200	Strong transcription	Sigmoid Colon	Sigmoid Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links