Variant report

Variant	esv3332495
Chromosome Location	chr19:23451842-23598069
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1745)
CpG islands
(count:916)
Chromatin interactive
region (count:22)
LncRNA
region (count:165)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1745 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr19:23582385-23582618	HepG2	liver:	n/a	n/a
2	ARID3A	chr19:23456159-23456538	HepG2	liver:	n/a	n/a
3	ARID3A	chr19:23577108-23577573	HepG2	liver:	n/a	n/a
4	ARID3A	chr19:23592964-23593248	HepG2	liver:	n/a	n/a
5	ARID3A	chr19:23456812-23457259	HepG2	liver:	n/a	n/a
6	ARID3A	chr19:23586013-23586771	HepG2	liver:	n/a	n/a
7	ARID3A	chr19:23466709-23467067	HepG2	liver:	n/a	n/a
8	ARID3A	chr19:23584631-23584918	HepG2	liver:	n/a	n/a
9	ARID3A	chr19:23578021-23578544	HepG2	liver:	n/a	n/a
10	ARID3A	chr19:23464504-23464974	HepG2	liver:	n/a	n/a
11	ATF1	chr19:23495315-23495375	K562	blood:	n/a	n/a
12	ATF1	chr19:23578242-23578507	K562	blood:	n/a	n/a
13	BACH1	chr19:23487080-23487334	H1-hESC	embryonic stem cell:	n/a	chr19:23487225-23487239
14	BACH1	chr19:23487075-23487353	K562	blood:	n/a	chr19:23487225-23487239
15	BCLAF1	chr19:23577695-23578386	GM12878	blood:	n/a	chr19:23577863-23577876
16	BCLAF1	chr19:23577806-23578259	GM12878	blood:	n/a	chr19:23577863-23577876
17	BHLHE40	chr19:23456098-23456569	GM12878	blood:	n/a	n/a
18	BHLHE40	chr19:23456780-23457323	GM12878	blood:	n/a	n/a
19	BHLHE40	chr19:23578060-23578466	GM12878	blood:	n/a	n/a
20	BHLHE40	chr19:23456932-23457093	K562	blood:	n/a	n/a
21	BHLHE40	chr19:23465524-23465669	GM12878	blood:	n/a	n/a
22	BRCA1	chr19:23456838-23457224	GM12878	blood:	n/a	n/a
23	BRCA1	chr19:23577414-23577648	H1-hESC	embryonic stem cell:	n/a	n/a
24	BRCA1	chr19:23577359-23578465	Hela-S3	cervix:	n/a	n/a
25	BRCA1	chr19:23477057-23477096	GM12878	blood:	n/a	n/a
26	BRCA1	chr19:23577365-23578276	HepG2	liver:	n/a	n/a
27	BRCA1	chr19:23456865-23457107	HepG2	liver:	n/a	n/a
28	BRCA1	chr19:23577422-23577533	GM12878	blood:	n/a	n/a
29	CEBPB	chr19:23590450-23591152	HepG2	liver:	n/a	n/a
30	CEBPB	chr19:23490584-23491429	HepG2	liver:	n/a	n/a
31	CEBPB	chr19:23493445-23494141	Hela-S3	cervix:	n/a	n/a
32	CEBPB	chr19:23456709-23457365	H1-hESC	embryonic stem cell:	n/a	n/a
33	CEBPB	chr19:23585264-23585525	K562	blood:	n/a	n/a
34	CEBPB	chr19:23490568-23491104	A549	lung:	n/a	n/a
35	CEBPB	chr19:23503921-23504021	HepG2	liver:	n/a	n/a
36	CEBPB	chr19:23590897-23591117	K562	blood:	n/a	n/a
37	CEBPB	chr19:23578253-23578568	IMR90	lung:	n/a	n/a
38	CEBPB	chr19:23496706-23497071	A549	lung:	n/a	n/a
39	CEBPB	chr19:23501814-23502681	HepG2	liver:	n/a	n/a
40	CEBPB	chr19:23500993-23501113	HepG2	liver:	n/a	n/a
41	CEBPB	chr19:23504797-23505116	MCF-7	breast:	n/a	n/a
42	CEBPB	chr19:23504786-23505137	IMR90	lung:	n/a	n/a
43	CEBPB	chr19:23501817-23502718	IMR90	lung:	n/a	n/a
44	CEBPB	chr19:23575678-23575924	MCF-7	breast:	n/a	n/a
45	CEBPB	chr19:23501811-23502717	A549	lung:	n/a	n/a
46	CEBPB	chr19:23584727-23585585	Hela-S3	cervix:	n/a	n/a
47	CEBPB	chr19:23574085-23574513	MCF-7	breast:	n/a	n/a
48	CEBPB	chr19:23590429-23591016	MCF-7	breast:	n/a	n/a
49	CEBPB	chr19:23590947-23591178	Hela-S3	cervix:	n/a	n/a
50	CEBPB	chr19:23578377-23578492	K562	blood:	n/a	n/a

(count:916 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr19:23578260-23578310	MCF10A-Er-Src	breast:	n/a
2	chr19:23578260-23578310	MCF10A-Er-Src	breast:	n/a
3	chr19:23456588-23456638	HCM	heart:	n/a
4	chr19:23578377-23578427	PANC-1	pancreas:	n/a
5	chr19:23578260-23578310	GM19239	blood:	n/a
6	chr19:23456790-23456840	BE2_C	brain:	n/a
7	chr19:23456575-23456625	PrEC	prostate:	n/a
8	chr19:23578377-23578427	K562	blood:	n/a
9	chr19:23578241-23578291	AG10803	skin:	n/a
10	chr19:23457005-23457055	BJ	skin:	n/a
11	chr19:23578377-23578427	GM12892	blood:	n/a
12	chr19:23578365-23578415	SK-N-SH	brain:	n/a
13	chr19:23578260-23578310	HL-60	blood:	n/a
14	chr19:23541643-23541693	CMK	blood:	n/a
15	chr19:23578292-23578342	HNPCEpiC	eye:	n/a
16	chr19:23456680-23456730	MCF10A-Er-Src	breast:	n/a
17	chr19:23578365-23578415	HIPEpiC	eye:	n/a
18	chr19:23457005-23457055	GM12892	blood:	n/a
19	chr19:23457005-23457055	HAEpiC	amniotic membrane:	n/a
20	chr19:23578377-23578427	HNPCEpiC	eye:	n/a
21	chr19:23454693-23454743	SK-N-SH_RA	brain:	n/a
22	chr19:23456575-23456625	ECC-1	luminal epithelium:	n/a
23	chr19:23454693-23454743	SK-N-MC	brain:	n/a
24	chr19:23577714-23577764	ProgFib	skin:	n/a
25	chr19:23578063-23578113	PrEC	prostate:	n/a
26	chr19:23578365-23578415	MCF10A-Er-Src	breast:	n/a
27	chr19:23456575-23456625	NHDF-neo	bronchial:	n/a
28	chr19:23456680-23456730	Hela-S3	cervix:	n/a
29	chr19:23457005-23457055	HRCEpiC	kidney:	n/a
30	chr19:23454693-23454743	MCF-7	breast:	n/a
31	chr19:23457005-23457055	AoSMC	blood vessel:	n/a
32	chr19:23578063-23578113	ProgFib	skin:	n/a
33	chr19:23456680-23456730	GM06990	blood:	n/a
34	chr19:23456790-23456840	NHBE	bronchial:	n/a
35	chr19:23578063-23578113	GM06990	blood:	n/a
36	chr19:23578260-23578310	HRE	kidney:	n/a
37	chr19:23578679-23578729	PANC-1	pancreas:	n/a
38	chr19:23578377-23578427	GM12891	blood:	n/a
39	chr19:23578063-23578113	AG09309	skin:	n/a
40	chr19:23456680-23456730	A549	lung:	n/a
41	chr19:23578241-23578291	HPAEpiC	pulmonary alveolar:	n/a
42	chr19:23578063-23578113	AoSMC	blood vessel:	n/a
43	chr19:23456790-23456840	HCT-116	colon:	n/a
44	chr19:23456790-23456840	GM12892	blood:	n/a
45	chr19:23578063-23578113	PANC-1	pancreas:	n/a
46	chr19:23578292-23578342	IMR90	lung:	fetal
47	chr19:23454693-23454743	SKMC	muscle:	n/a
48	chr19:23457005-23457055	GM06990	blood:	n/a
49	chr19:23578679-23578729	BJ	skin:	n/a
50	chr19:23578365-23578415	BJ	skin:	n/a

(count:22 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:23571146..23574036-chr19:23574733..23577243,2	K562	blood:
2	chr17:56735011..56736549-chr19:23464937..23466566,2	MCF-7	breast:
3	chr19:23571146..23573840-chr19:23574386..23577614,3	K562	blood:
4	chr19:23598051..23598951-chr19:24216258..24216783,2	NB4	blood:
5	chr19:23450360..23452680-chr19:23454564..23456528,2	MCF-7	breast:
6	chr19:23432656..23435103-chr19:23454271..23457071,2	MCF-7	breast:
7	chr19:23571146..23574036-chr19:23574733..23577243,2	K562	blood:
8	chr19:23564648..23566828-chr19:23577196..23579466,2	MCF-7	breast:
9	chr19:23597097..23600084-chr19:24215418..24217838,2	MCF-7	breast:
10	chr19:23456603..23457127-chr19:24215859..24216611,4	MCF-7	breast:
11	chr19:23456110..23458063-chr19:23465875..23467770,2	MCF-7	breast:
12	chr19:23574385..23576315-chr19:23576535..23579430,2	K562	blood:
13	chr19:23577656..23578478-chr19:49121947..49122666,2	NB4	blood:
14	chr19:23443599..23446084-chr19:23455345..23457112,3	MCF-7	breast:
15	chr19:23597107..23600085-chr19:24215651..24217575,2	MCF-7	breast:
16	chr19:23520093..23520713-chr21:9826403..9827051,2	MCF-7	breast:
17	chr19:23450360..23452680-chr19:23454564..23456528,2	MCF-7	breast:
18	chr19:23571146..23573840-chr19:23574386..23577614,3	K562	blood:
19	chr19:23576617..23579164-chr19:23594549..23597394,2	MCF-7	breast:
20	chr19:23577154..23579229-chr19:23583278..23584951,2	MCF-7	breast:
21	chr19:23433051..23435448-chr19:23455541..23457705,2	MCF-7	breast:
22	chr19:23576348..23579660-chr19:23867719..23870587,3	MCF-7	breast:

(count:165 , 50 per page) page: 1 2 3 4

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-ZNF91-1	chr19:23588060-23588137	ENSG00000269416.1
2	lnc-ZNF730-10	chr19:23471422-23472147	NONHSAT063883
3	lnc-AC092329.1-1	chr19:23456878-23457053	NONHSAT063866
4	lnc-AC092329.1-2	chr19:23487809-23487915	XLOC_013275
5	lnc-ZNF91-1	chr19:23586008-23586295	ENSG00000269416.1
6	lnc-ZNF91-1	chr19:23585164-23585314	ENSG00000269416.1
7	lnc-AC092329.1-1	chr19:23456878-23456979	XLOC_013274
8	lnc-AC092329.1-1	chr19:23456878-23457037	XLOC_013274
9	lnc-AC092329.1-2	chr19:23489611-23491899	NONHSAT063892
10	lnc-ZNF91-1	chr19:23588802-23588907	ENSG00000246181
11	lnc-ZNF91-1	chr19:23582038-23583849	NONHSAT063908
12	lnc-ZNF91-1	chr19:23587726-23587910	NONHSAT063918
13	lnc-ZNF91-1	chr19:23587554-23587648	ENSG00000269416.1
14	lnc-AC092329.1-2	chr19:23490106-23490204	NONHSAT063893
15	lnc-AC092329.1-2	chr19:23521655-23521856	NONHSAT063902
16	lnc-ZNF730-14	chr19:23586491-23586538	NONHSAT063915
17	lnc-AC092329.1-2	chr19:23493350-23493472	NONHSAT063893
18	lnc-ZNF91-1	chr19:23588060-23588137	NONHSAT063917
19	lnc-ZNF91-1	chr19:23590700-23590900	NONHSAT063908
20	lnc-AC092329.1-2	chr19:23493124-23493230	XLOC_013275
21	lnc-ZNF730-3	chr19:23502462-23502571	XLOC_013021
22	lnc-ZNF91-1	chr19:23583786-23583849	ENSG00000269416.1
23	lnc-AC092329.1-1	chr19:23456878-23457034	ENSG00000213971.3
24	lnc-AC092329.1-2	chr19:23491726-23491899	XLOC_013275
25	lnc-AC092329.1-2	chr19:23487812-23487933	XLOC_013275
26	lnc-AC092329.1-2	chr19:23487801-23487933	NONHSAT063885
27	lnc-AC092329.1-2	chr19:23493350-23493434	XLOC_013275
28	lnc-AC092329.1-2	chr19:23491532-23491899	XLOC_013275
29	lnc-ZNF91-1	chr19:23587753-23587910	NONHSAT063917
30	lnc-ZNF91-1	chr19:23586008-23586295	ENSG00000246181
31	lnc-ZNF91-1	chr19:23587753-23587910	ENSG00000246181
32	lnc-AC092329.1-1	chr19:23456878-23457021	XLOC_013274
33	lnc-ZNF91-1	chr19:23586008-23586295	ENSG00000269416.1
34	lnc-ZNF91-1	chr19:23586008-23586295	NONHSAT063908
35	lnc-ZNF91-1	chr19:23587753-23587910	ENSG00000269416.1
36	lnc-AC092329.1-1	chr19:23453020-23453094	NONHSAT063867
37	lnc-AC092329.1-1	chr19:23456878-23457053	NONHSAT063867
38	lnc-ZNF91-1	chr19:23584979-23585314	ENSG00000269416.1
39	lnc-AC092329.1-1	chr19:23453020-23453094	ENSG00000213971.3
40	lnc-ZNF91-1	chr19:23587339-23587364	NONHSAT063917
41	lnc-ZNF91-1	chr19:23588060-23588137	NONHSAT063908
42	lnc-ZNF91-1	chr19:23582272-23583849	ENSG00000246181
43	lnc-AC092329.1-2	chr19:23493350-23493472	NONHSAT063886
44	lnc-AC092329.1-1	chr19:23452688-23453094	ENSG00000213971.3
45	lnc-ZNF730-3	chr19:23503946-23504093	XLOC_013021
46	lnc-AC092329.1-1	chr19:23452692-23453088	XLOC_013274
47	lnc-ZNF91-1	chr19:23588060-23588137	ENSG00000246181
48	lnc-AC092329.1-2	chr19:23487809-23487933	XLOC_013275
49	lnc-AC092329.1-2	chr19:23491726-23491899	NONHSAT063893
50	lnc-ZNF91-1	chr19:23590700-23590893	ENSG00000269416.1

No data

Variant related genes	Relation type
ENSG00000213971	TF binding region
ENSG00000269416	TF binding region
ENSG00000269107	TF binding region
ENSG00000268992	TF binding region
ENSG00000269431	TF binding region
VN1R91P	TF binding region
VN1R90P	TF binding region
ZNF91	TF binding region
ENSG00000267934	TF binding region
ENSG00000213971	CpG island
ENSG00000269416	CpG island
ENSG00000269107	CpG island
ENSG00000268992	CpG island
ENSG00000269431	CpG island
VN1R91P	CpG island
VN1R90P	CpG island
ZNF91	CpG island
ENSG00000267934	CpG island
ENSG00000196081	chromatin interactions
ENSG00000063176	chromatin interactions
ENSG00000167232	chromatin interactions
ENSG00000268362	chromatin interactions
ENSG00000213096	chromatin interactions
ENSG00000063177	chromatin interactions
ENSG00000197372	chromatin interactions
ENSG00000213971	chromatin interactions
PLS3	miRNA target sites
TNKS	miRNA target sites
GTF2IRD2	miRNA target sites
TMEM30A	miRNA target sites
TBC1D22B	miRNA target sites
FAM199X	miRNA target sites
HIATL1	miRNA target sites
NFIB	miRNA target sites
TES	miRNA target sites
DNMBP	miRNA target sites
KIF16B	miRNA target sites
ARF3	miRNA target sites
ALG9	miRNA target sites
NR4A1	miRNA target sites
HECTD2	miRNA target sites
ELMO2	miRNA target sites
SOD2	miRNA target sites
ARCN1	miRNA target sites
ELK4	miRNA target sites
EIF2C2	miRNA target sites
ELK3	miRNA target sites
GABRB3	miRNA target sites
EIF1AX	miRNA target sites
NR3C2	miRNA target sites

Extended variants
information (count: 6320 )
Associated
traits (count: 42 )

Variant overlapped rSNPs/rCNVs (count:6320 , 50 per page) page: 1 2 3 4 5 6 7 ... 127

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs558507406	chr19:23451850-23451851	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs576957975	chr19:23451861-23451862	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs544262484	chr19:23451920-23451921	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs563357055	chr19:23451923-23451924	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs143415300	chr19:23451941-23451942	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs139015660	chr19:23451948-23451949	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs111650374	chr19:23452000-23452001	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
8	rs183407026	chr19:23452030-23452031	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
9	rs295425	chr19:23452053-23452054	Weak transcription Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs295424	chr19:23452082-23452083	Weak transcription Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs373724733	chr19:23452094-23452095	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
12	rs295423	chr19:23452107-23452108	Weak transcription Strong transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs112303171	chr19:23452119-23452120	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
14	rs539606540	chr19:23452151-23452152	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
15	rs532260728	chr19:23452176-23452177	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
16	rs187905431	chr19:23452204-23452205	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
17	rs569356065	chr19:23452212-23452213	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
18	rs536890575	chr19:23452221-23452222	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
19	rs36070343	chr19:23452225-23452226	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
20	rs398034298	chr19:23452246-23452247	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
21	rs548491717	chr19:23452268-23452269	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
22	rs141905369	chr19:23452283-23452284	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
23	rs76790641	chr19:23452388-23452389	Weak transcription Strong transcription	lncRNA	n/a	Overlapped CNVs	n/a
24	rs11882953	chr19:23452425-23452426	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs570482376	chr19:23452531-23452532	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
26	rs10422569	chr19:23452544-23452545	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs201071113	chr19:23452596-23452597	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
28	rs375596492	chr19:23452610-23452611	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
29	rs75030636	chr19:23452728-23452729	Weak transcription Strong transcription Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats	lncRNA	n/a	Overlapped CNVs	n/a
30	rs150636203	chr19:23452823-23452824	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
31	rs139713170	chr19:23452828-23452829	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
32	rs149770508	chr19:23452835-23452836	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
33	rs369139447	chr19:23452870-23452871	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
34	rs554449044	chr19:23452893-23452894	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
35	rs192862659	chr19:23452898-23452899	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
36	rs150665880	chr19:23452954-23452955	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
37	rs144578625	chr19:23452956-23452957	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
38	rs538090012	chr19:23452994-23452995	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
39	rs1091669	chr19:23453019-23453020	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
40	rs1081724	chr19:23453029-23453030	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
41	rs564895838	chr19:23453050-23453051	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
42	rs532099499	chr19:23453080-23453081	Weak transcription Strong transcription Genic enhancers	lncRNA	n/a	Overlapped CNVs	n/a
43	rs34489841	chr19:23453096-23453097	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs543982568	chr19:23453119-23453120	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs558006433	chr19:23453122-23453123	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs371757898	chr19:23453123-23453124	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs529731178	chr19:23453180-23453181	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs548797666	chr19:23453182-23453183	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs566689484	chr19:23453184-23453185	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs115221829	chr19:23453189-23453190	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:42)

Disease	PMID	Source
Medulloblastoma	16783165	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Prostate cancer	16573809	CNVD
Chordoma	18071362	CNVD
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
ovarian endometriomas	16273235	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	17387387	CNVD
Cervical cancer	21063398	CNVD
Myelodysplastic syndrome	17634407	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Retinoblastoma	21504564	CNVD
Ovarian cancer	21720365	CNVD
Cancer	20164919	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Prostate cancer	18632612	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Lung cancer	18438408	CNVD
Adenoid cystic carcinoma	18698036	CNVD
Myelofibrosis	22110671	CNVD
Cancer	21183584	CNVD
Colorectal cancer	20459617	CNVD
Ductal carcinoma	22052326	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:3806 , 50 per page) page: 1 2 3 4 5 6 7 ... 77

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:23433200-23455000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
2	chr19:23433200-23456200	Weak transcription	Small Intestine	intestine
3	chr19:23433400-23455400	Weak transcription	Stomach Mucosa	stomach
4	chr19:23433400-23455800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr19:23433400-23456000	Weak transcription	Osteobl	bone
6	chr19:23433600-23453800	Weak transcription	Fetal Brain Male	brain
7	chr19:23433600-23455000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
8	chr19:23433600-23455600	Weak transcription	Psoas Muscle	Psoas
9	chr19:23433600-23455600	Weak transcription	NHDF-Ad	bronchial
10	chr19:23433600-23455800	Weak transcription	Muscle Satellite Cultured Cells	--
11	chr19:23433600-23455800	Weak transcription	Right Atrium	heart
12	chr19:23433600-23455800	Weak transcription	NH-A	brain
13	chr19:23437600-23455600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr19:23438600-23455000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr19:23441400-23452400	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr19:23441400-23454800	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
17	chr19:23441400-23455200	Strong transcription	HUES48 Cell Line	embryonic stem cell
18	chr19:23441400-23455200	Strong transcription	HUES64 Cell Line	embryonic stem cell
19	chr19:23441600-23454600	Strong transcription	iPS-20b Cell Line	embryonic stem cell
20	chr19:23442000-23455800	Weak transcription	Colonic Mucosa	Colon
21	chr19:23442200-23455600	Weak transcription	NHLF	lung
22	chr19:23442800-23453800	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
23	chr19:23442800-23455400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
24	chr19:23442800-23456000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr19:23443000-23455600	Weak transcription	Fetal Heart	heart
26	chr19:23443000-23455800	Weak transcription	HMEC	breast
27	chr19:23443200-23455400	Weak transcription	Primary hematopoietic stem cells	blood
28	chr19:23443200-23455400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
29	chr19:23443200-23455600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr19:23443200-23455600	Weak transcription	NHEK	skin
31	chr19:23443200-23455800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr19:23443200-23455800	Weak transcription	Right Ventricle	heart
33	chr19:23443200-23456000	Weak transcription	HSMMtube	muscle
34	chr19:23444200-23455600	Weak transcription	Fetal Kidney	kidney
35	chr19:23444200-23455600	Weak transcription	Pancreatic Islets	Pancreatic Islet
36	chr19:23444400-23455800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
37	chr19:23444600-23455600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
38	chr19:23444600-23456000	Weak transcription	Gastric	stomach
39	chr19:23444800-23452400	Weak transcription	Brain Substantia Nigra	brain
40	chr19:23445000-23456000	Weak transcription	Primary neutrophils fromperipheralblood	blood
41	chr19:23446000-23455800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
42	chr19:23446200-23452400	Strong transcription	Fetal Brain Female	brain
43	chr19:23446200-23454200	Weak transcription	Brain Anterior Caudate	brain
44	chr19:23446200-23454600	Weak transcription	Brain Cingulate Gyrus	brain
45	chr19:23447000-23455600	Weak transcription	Rectal Smooth Muscle	rectum
46	chr19:23447200-23455600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
47	chr19:23447400-23454600	Weak transcription	Brain Angular Gyrus	brain
48	chr19:23447400-23455600	Weak transcription	Colon Smooth Muscle	Colon
49	chr19:23447400-23455800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
50	chr19:23447400-23455800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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