Variant report

Variant	esv3332519
Chromosome Location	chr20:24535099-24815615
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1966)
CpG islands
(count:244)
Chromatin interactive
region (count:108)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1966 , 50 per page) page: 1 2 3 4 5 6 7 ... 40

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr20:24736101-24736599	HepG2	liver:	n/a	n/a
2	ATF2	chr20:24589664-24590220	GM12878	blood:	n/a	n/a
3	ATF3	chr20:24631670-24632182	A549	lung:	n/a	n/a
4	BACH1	chr20:24726894-24727261	H1-hESC	embryonic stem cell:	n/a	n/a
5	BACH1	chr20:24615397-24615874	K562	blood:	n/a	chr20:24615832-24615846
6	BACH1	chr20:24615278-24615974	H1-hESC	embryonic stem cell:	n/a	chr20:24615832-24615846
7	BACH1	chr20:24559405-24559495	H1-hESC	embryonic stem cell:	n/a	n/a
8	BATF	chr20:24589803-24590112	GM12878	blood:	n/a	n/a
9	BATF	chr20:24589720-24590131	GM12878	blood:	n/a	n/a
10	BCL3	chr20:24793533-24794095	GM12878	blood:	n/a	n/a
11	BCL3	chr20:24793446-24794245	GM12878	blood:	n/a	n/a
12	BHLHE40	chr20:24613818-24614115	K562	blood:	n/a	chr20:24613948-24613957 chr20:24613947-24613956 chr20:24613947-24613956
13	BHLHE40	chr20:24615449-24615845	K562	blood:	n/a	chr20:24615636-24615652
14	BHLHE40	chr20:24789382-24789495	K562	blood:	n/a	n/a
15	BHLHE40	chr20:24614433-24614687	K562	blood:	n/a	chr20:24614510-24614519 chr20:24614510-24614519 chr20:24614511-24614520 chr20:24614508-24614521
16	BHLHE40	chr20:24789440-24789585	GM12878	blood:	n/a	n/a
17	BHLHE40	chr20:24632352-24632357	K562	blood:	n/a	n/a
18	BHLHE40	chr20:24610371-24610669	K562	blood:	n/a	n/a
19	BHLHE40	chr20:24589542-24590046	GM12878	blood:	n/a	n/a
20	BHLHE40	chr20:24797734-24797766	K562	blood:	n/a	n/a
21	BRCA1	chr20:24709520-24709714	H1-hESC	embryonic stem cell:	n/a	n/a
22	CCNT2	chr20:24615480-24615919	K562	blood:	n/a	n/a
23	CEBPB	chr20:24676202-24676506	IMR90	lung:	n/a	chr20:24676333-24676344 chr20:24676332-24676349 chr20:24676334-24676345 chr20:24676333-24676346 chr20:24676335-24676344
24	CEBPB	chr20:24654325-24654708	A549	lung:	n/a	n/a
25	CEBPB	chr20:24772384-24772681	A549	lung:	n/a	n/a
26	CEBPB	chr20:24807869-24808090	HepG2	liver:	n/a	n/a
27	CEBPB	chr20:24631789-24632195	A549	lung:	n/a	chr20:24631991-24632002
28	CEBPB	chr20:24631773-24632421	IMR90	lung:	n/a	chr20:24631991-24632002
29	CEBPB	chr20:24631585-24632390	A549	lung:	n/a	chr20:24631991-24632002
30	CEBPB	chr20:24590143-24590389	Hela-S3	cervix:	n/a	chr20:24590257-24590270 chr20:24590226-24590237
31	CEBPB	chr20:24736080-24736660	HepG2	liver:	n/a	n/a
32	CEBPB	chr20:24561021-24561219	A549	lung:	n/a	n/a
33	CEBPB	chr20:24736140-24736541	A549	lung:	n/a	n/a
34	CEBPB	chr20:24654123-24654740	IMR90	lung:	n/a	chr20:24654273-24654286
35	CEBPB	chr20:24622057-24622148	K562	blood:	n/a	chr20:24622103-24622114
36	CEBPB	chr20:24631751-24632268	HCT-116	colon:	n/a	chr20:24631991-24632002
37	CEBPB	chr20:24736057-24736558	HepG2	liver:	n/a	n/a
38	CEBPB	chr20:24753311-24753631	HepG2	liver:	n/a	n/a
39	CEBPB	chr20:24769957-24770261	H1-hESC	embryonic stem cell:	n/a	chr20:24770163-24770180
40	CEBPB	chr20:24621939-24622279	IMR90	lung:	n/a	chr20:24622103-24622114
41	CEBPB	chr20:24590045-24590409	HepG2	liver:	n/a	chr20:24590257-24590270 chr20:24590226-24590237
42	CEBPB	chr20:24736134-24736462	HepG2	liver:	n/a	n/a
43	CEBPB	chr20:24621930-24622274	A549	lung:	n/a	chr20:24622103-24622114
44	CEBPB	chr20:24561016-24561155	HepG2	liver:	n/a	n/a
45	CEBPB	chr20:24778562-24778822	IMR90	lung:	n/a	chr20:24778671-24778684 chr20:24778673-24778684 chr20:24778671-24778682
46	CEBPB	chr20:24587885-24587949	HepG2	liver:	n/a	chr20:24587930-24587941
47	CEBPB	chr20:24736092-24736631	HepG2	liver:	n/a	n/a
48	CEBPB	chr20:24675731-24676542	MCF-7	breast:	n/a	chr20:24676333-24676344 chr20:24676332-24676349 chr20:24676334-24676345 chr20:24676333-24676346 chr20:24675893-24675906 chr20:24676335-24676344
49	CEBPB	chr20:24631835-24632226	MCF-7	breast:	n/a	chr20:24631991-24632002
50	CEBPB	chr20:24590137-24590337	K562	blood:	n/a	chr20:24590257-24590270 chr20:24590226-24590237

(count:244 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr20:24784216-24784266	A549	lung:	n/a
2	chr20:24615715-24615765	BE2_C	brain:	n/a
3	chr20:24615715-24615765	SAEC	small airway:	n/a
4	chr20:24615715-24615765	PANC-1	pancreas:	n/a
5	chr20:24784216-24784266	HPAEpiC	pulmonary alveolar:	n/a
6	chr20:24784136-24784186	NB4	blood:	n/a
7	chr20:24615715-24615765	CMK	blood:	n/a
8	chr20:24615715-24615765	GM19239	blood:	n/a
9	chr20:24784136-24784186	Caco-2	colon:	n/a
10	chr20:24646600-24646650	HL-60	blood:	n/a
11	chr20:24784136-24784186	GM19239	blood:	n/a
12	chr20:24646600-24646650	GM12892	blood:	n/a
13	chr20:24784136-24784186	HIPEpiC	eye:	n/a
14	chr20:24646600-24646650	NH-A	brain:	n/a
15	chr20:24784216-24784266	AG10803	skin:	n/a
16	chr20:24646600-24646650	MCF-7	breast:	n/a
17	chr20:24646600-24646650	CMK	blood:	n/a
18	chr20:24646600-24646650	HNPCEpiC	eye:	n/a
19	chr20:24784136-24784186	HRE	kidney:	n/a
20	chr20:24615715-24615765	HCPEpiC	choroid plexus:	n/a
21	chr20:24784136-24784186	NH-A	brain:	n/a
22	chr20:24646600-24646650	Hepatocyte	liver:	n/a
23	chr20:24784136-24784186	LNCaP	prostate:	n/a
24	chr20:24784216-24784266	HCT-116	colon:	n/a
25	chr20:24784216-24784266	GM12891	blood:	n/a
26	chr20:24784216-24784266	HepG2	liver:	n/a
27	chr20:24615715-24615765	HEK293	kidney:	embryo
28	chr20:24615715-24615765	NH-A	brain:	n/a
29	chr20:24615715-24615765	Hepatocyte	liver:	n/a
30	chr20:24784216-24784266	HEEpiC	esophagus:	n/a
31	chr20:24784216-24784266	SK-N-SH_RA	brain:	n/a
32	chr20:24646600-24646650	GM12878	blood:	n/a
33	chr20:24784216-24784266	Hepatocyte	liver:	n/a
34	chr20:24615715-24615765	HRE	kidney:	n/a
35	chr20:24784136-24784186	PrEC	prostate:	n/a
36	chr20:24615715-24615765	SK-N-SH	brain:	n/a
37	chr20:24784216-24784266	T-47D	breast:	n/a
38	chr20:24784136-24784186	SKMC	muscle:	n/a
39	chr20:24646600-24646650	GM19239	blood:	n/a
40	chr20:24784216-24784266	HAEpiC	amniotic membrane:	n/a
41	chr20:24784136-24784186	NHDF-neo	bronchial:	n/a
42	chr20:24784136-24784186	AG10803	skin:	n/a
43	chr20:24784136-24784186	AG09309	skin:	n/a
44	chr20:24784216-24784266	RPTEC	kidney:	n/a
45	chr20:24615715-24615765	NHBE	bronchial:	n/a
46	chr20:24615715-24615765	H1-hESC	embryonic stem cell:	embryo
47	chr20:24615715-24615765	HL-60	blood:	n/a
48	chr20:24615715-24615765	HIPEpiC	eye:	n/a
49	chr20:24646600-24646650	GM06990	blood:	n/a
50	chr20:24784216-24784266	PANC-1	pancreas:	n/a

(count:108 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr20:24778826..24780956-chr20:24782590..24785406,2	MCF-7	breast:
2	chr20:24630307..24631279-chr20:24640279..24641332,14	MCF-7	breast:
3	chr20:24553434..24555303-chr20:24556934..24559147,2	MCF-7	breast:
4	chr20:24630261..24631279-chr20:24640264..24641332,21	MCF-7	breast:
5	chr20:24610820..24613195-chr8:23266116..23269029,2	MCF-7	breast:
6	chr17:72982681..72985188-chr20:24771420..24774172,2	MCF-7	breast:
7	chr20:24629731..24632578-chr20:24657556..24659618,3	MCF-7	breast:
8	chr20:24797658..24800025-chr20:24806940..24809429,2	MCF-7	breast:
9	chr20:24651840..24653392-chr20:24727209..24728729,2	MCF-7	breast:
10	chr20:24611712..24613428-chr20:24614096..24616788,2	K562	blood:
11	chr20:24624340..24627189-chr20:24639641..24641542,2	MCF-7	breast:
12	chr20:24602331..24603843-chr20:24632177..24634998,2	MCF-7	breast:
13	chr20:24645518..24647041-chr20:24652515..24654778,2	MCF-7	breast:
14	chr20:24284170..24284741-chr20:24580499..24581174,2	MCF-7	breast:
15	chr20:24671407..24673133-chr20:24673157..24675510,2	K562	blood:
16	chr20:24763298..24765600-chr20:24898179..24900035,23	MCF-7	breast:
17	chr20:24623933..24625636-chr20:24628321..24630040,2	MCF-7	breast:
18	chr20:24786455..24788540-chr20:24788618..24791423,2	MCF-7	breast:
19	chr20:24764501..24765530-chr20:24898693..24899347,4	MCF-7	breast:
20	chr20:24637159..24638708-chr20:24641343..24643289,2	K562	blood:
21	chr20:24185798..24186480-chr20:24761761..24762538,2	MCF-7	breast:
22	chr20:24630363..24631077-chr20:30628301..30629231,2	MCF-7	breast:
23	chr20:24283824..24284530-chr20:24761681..24762698,3	MCF-7	breast:
24	chr20:24630307..24631279-chr20:24640279..24641332,14	MCF-7	breast:
25	chr20:24780843..24782788-chr20:24791141..24793003,2	MCF-7	breast:
26	chr20:24764889..24765421-chr20:24919390..24920112,2	MCF-7	breast:
27	chr20:24629904..24632760-chr20:24759535..24761078,2	MCF-7	breast:
28	chr20:24630442..24631150-chr20:24777044..24777861,2	MCF-7	breast:
29	chr20:24629448..24631960-chr20:24674530..24677062,2	MCF-7	breast:
30	chr20:24630391..24631212-chr20:24752974..24753906,2	MCF-7	breast:
31	chr20:24631593..24633850-chr20:24634510..24636557,2	MCF-7	breast:
32	chr20:24764506..24765162-chr20:24897617..24898498,2	MCF-7	breast:
33	chr20:24624340..24627189-chr20:24639641..24641542,2	MCF-7	breast:
34	chr20:24633208..24634877-chr20:24753642..24755749,2	MCF-7	breast:
35	chr20:24771567..24773890-chr20:24790007..24791908,2	MCF-7	breast:
36	chr20:24716951..24718615-chr20:24720507..24722408,2	MCF-7	breast:
37	chr20:24755822..24758667-chr20:24759812..24761777,2	MCF-7	breast:
38	chr20:24671407..24673133-chr20:24673157..24675510,2	K562	blood:
39	chr20:24630371..24631127-chr20:24753147..24753931,3	MCF-7	breast:
40	chr20:24770878..24773860-chr20:24773955..24776847,2	MCF-7	breast:
41	chr20:24602331..24603843-chr20:24632177..24634998,2	MCF-7	breast:
42	chr20:24600299..24601915-chr20:24602393..24603916,2	MCF-7	breast:
43	chr20:24751479..24753898-chr20:24757094..24759323,2	MCF-7	breast:
44	chr20:24760897..24762927-chr20:24971923..24974297,2	MCF-7	breast:
45	chr20:24671696..24673797-chr20:24673883..24676356,3	MCF-7	breast:
46	chr20:24610034..24611986-chr20:24615289..24617855,2	MCF-7	breast:
47	chr20:24778826..24780956-chr20:24782590..24785406,2	MCF-7	breast:
48	chr20:24631399..24634097-chr20:24646074..24647990,2	MCF-7	breast:
49	chr20:24633208..24634877-chr20:24753642..24755749,2	MCF-7	breast:
50	chr20:24786455..24788540-chr20:24788618..24791423,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-CST7-3	chr20:24608941-24609627	NONHSAT079113
2	lnc-SYNDIG1-1	chr20:24660183-24660300	XLOC_013498
3	lnc-CST7-3	chr20:24608183-24608300	NONHSAT079113
4	lnc-SYNDIG1-1	chr20:24660941-24661627	XLOC_013498

No data

Variant related genes	Relation type
SYNDIG1	TF binding region
ENSG00000231015	TF binding region
SYNDIG1	CpG island
ENSG00000231015	CpG island
ENSG00000109089	chromatin interactions
ENSG00000101474	chromatin interactions
ENSG00000101463	chromatin interactions

Extended variants
information (count: 12264 )
Associated
traits (count: 59 )

Variant overlapped rSNPs/rCNVs (count:12264 , 50 per page) page: 1 2 3 4 5 6 7 ... 246

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs79814933	chr20:24535136-24535137	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs562816025	chr20:24535211-24535212	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs372783005	chr20:24535218-24535219	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs576228119	chr20:24535244-24535245	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs139565497	chr20:24535254-24535255	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs561228002	chr20:24535305-24535306	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs530259846	chr20:24535369-24535370	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs547113744	chr20:24535380-24535381	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs6049785	chr20:24535389-24535390	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs112358492	chr20:24535417-24535418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs373228210	chr20:24535448-24535449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs200451737	chr20:24535453-24535454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs373439164	chr20:24535498-24535499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs201935497	chr20:24535514-24535515	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs377435585	chr20:24535617-24535618	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs113353563	chr20:24535639-24535640	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs552463905	chr20:24535651-24535652	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs369411359	chr20:24535771-24535772	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs569557948	chr20:24535809-24535810	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs538103626	chr20:24535812-24535813	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs200025226	chr20:24535838-24535839	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs569402719	chr20:24535871-24535872	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs371230548	chr20:24535926-24535927	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs200902811	chr20:24535957-24535958	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs377363283	chr20:24535967-24535968	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs201897839	chr20:24536029-24536030	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs547820599	chr20:24536073-24536074	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs192418179	chr20:24536131-24536132	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs533666933	chr20:24536138-24536139	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs184605088	chr20:24536142-24536143	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs576829556	chr20:24536151-24536152	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs188232139	chr20:24536153-24536154	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs556037351	chr20:24536199-24536200	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs576415536	chr20:24536259-24536260	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs547852150	chr20:24536269-24536270	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs548293477	chr20:24536298-24536299	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs561313561	chr20:24536324-24536325	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs6114772	chr20:24536362-24536363	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs574865043	chr20:24536367-24536368	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs113532892	chr20:24536417-24536418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs111616076	chr20:24536447-24536448	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs566360696	chr20:24536505-24536506	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs199899491	chr20:24536526-24536527	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs540767359	chr20:24536531-24536532	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs61654858	chr20:24536596-24536597	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs560653424	chr20:24536612-24536613	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs532474662	chr20:24536616-24536617	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs546383579	chr20:24536619-24536620	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs536568545	chr20:24536666-24536667	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs562929797	chr20:24536687-24536688	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:59)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	16272173	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	19627613	CNVD
colon cancer	17210682	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Colorectal cancer	19359472	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Human rectal carcinomas	16397240	CNVD
Olfactory neuroblastoma	18408657	CNVD
Central neurocytomas	17123091	CNVD
Colorectal cancer	16272173	CNVD
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Urothelial carcinoma	21177765	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Colorectal cancer	21645411	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Autism	22495311	CNVD
Renal cell carcinoma	18765545	CNVD
Alagille syndrome	17576883	CNVD
Anaplastic large cell lymphoma	18179710	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Cancer	21183584	CNVD
Myxofibrosarcoma	16751306	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Breast cancer	16608533	CNVD
Bladder cancer	21909424	CNVD
Esophageal cancer	21851588	CNVD
Breast cancer	17133270	CNVD
Thrombophilia	17576883	CNVD
Myelofibrosis	22110671	CNVD
Mental retardation	21062444	CNVD
Hepatocellular carcinoma	22174799	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Chordoma	18071362	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	21364760	CNVD
Cancer	20164919	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Oral cancer	21386901	CNVD

Chromatin state (count:2011 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:24525400-24541800	Weak transcription	Left Ventricle	heart
2	chr20:24527400-24540200	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr20:24528800-24538400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
4	chr20:24528800-24546400	Weak transcription	Aorta	Aorta
5	chr20:24538400-24538800	ZNF genes & repeats	ES-UCSF4 Cell Line	embryonic stem cell
6	chr20:24538600-24539400	ZNF genes & repeats	HUES64 Cell Line	embryonic stem cell
7	chr20:24538800-24570200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr20:24539400-24541000	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr20:24539800-24540000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr20:24540000-24541800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr20:24540200-24540400	Enhancers	Brain Angular Gyrus	brain
12	chr20:24540200-24540400	Enhancers	Brain Inferior Temporal Lobe	brain
13	chr20:24540400-24541600	Weak transcription	Brain Angular Gyrus	brain
14	chr20:24540400-24541600	Weak transcription	Brain Inferior Temporal Lobe	brain
15	chr20:24541000-24541200	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr20:24541000-24541800	Enhancers	Fetal Brain Male	brain
17	chr20:24541000-24542200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
18	chr20:24541000-24542400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr20:24541000-24543200	Enhancers	Brain Substantia Nigra	brain
20	chr20:24541200-24541800	Enhancers	Brain Hippocampus Middle	brain
21	chr20:24541200-24542400	Enhancers	Brain Cingulate Gyrus	brain
22	chr20:24541600-24542200	Enhancers	Brain Angular Gyrus	brain
23	chr20:24541600-24542600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr20:24541600-24542600	Enhancers	Brain Inferior Temporal Lobe	brain
25	chr20:24541800-24542000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr20:24541800-24542000	Flanking Active TSS	Brain Hippocampus Middle	brain
27	chr20:24541800-24542000	Enhancers	Psoas Muscle	Psoas
28	chr20:24541800-24542000	Enhancers	Right Atrium	heart
29	chr20:24541800-24542200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr20:24541800-24542200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
31	chr20:24541800-24542400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
32	chr20:24541800-24542400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
33	chr20:24541800-24542400	Enhancers	Left Ventricle	heart
34	chr20:24541800-24551600	Weak transcription	Fetal Brain Male	brain
35	chr20:24542000-24543600	Enhancers	Brain Hippocampus Middle	brain
36	chr20:24542200-24543400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr20:24542200-24543800	Weak transcription	Psoas Muscle	Psoas
38	chr20:24542200-24544600	Weak transcription	Brain Angular Gyrus	brain
39	chr20:24542200-24552400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
40	chr20:24542400-24544000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
41	chr20:24542400-24551800	Weak transcription	Brain Cingulate Gyrus	brain
42	chr20:24542600-24545200	Weak transcription	Brain Inferior Temporal Lobe	brain
43	chr20:24543200-24553200	Weak transcription	Brain Substantia Nigra	brain
44	chr20:24543400-24545400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr20:24543600-24544400	Weak transcription	Brain Hippocampus Middle	brain
46	chr20:24544000-24544800	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
47	chr20:24544400-24545800	Enhancers	Brain Hippocampus Middle	brain
48	chr20:24544600-24545400	Enhancers	Brain Angular Gyrus	brain
49	chr20:24544800-24546000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr20:24545000-24545400	Enhancers	Brain Anterior Caudate	brain

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