Variant report

Variant	esv3333384
Chromosome Location	chr7:16078353-16078775
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 86 )

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs185528997	chr7:16078366-16078367	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs545610088	chr7:16078376-16078377	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs564021680	chr7:16078399-16078400	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs548714488	chr7:16078402-16078403	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs12537148	chr7:16078412-16078413	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
6	rs546576807	chr7:16078417-16078418	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs560465190	chr7:16078426-16078427	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs75163903	chr7:16078455-16078456	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs77526687	chr7:16078456-16078457	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs550912968	chr7:16078507-16078508	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs569168346	chr7:16078508-16078509	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs57577088	chr7:16078516-16078517	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs557981106	chr7:16078558-16078559	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs370935449	chr7:16078566-16078567	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs557232576	chr7:16078676-16078677	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs566843667	chr7:16078713-16078714	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs369921026	chr7:16078726-16078727	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs528651937	chr7:16078763-16078764	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:86)

Disease	PMID	Source
Melanoma	18172304	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Ovarian cancer	22174824	CNVD
Urothelial carcinoma	18382360	CNVD
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21364760	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
Leukemia	23979775	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Prostate cancer	16573809	CNVD
Acute myeloid leukemia	21251322	CNVD
Melanoma	17363583	CNVD
Kartagener syndrome	16639409	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	19242612	CNVD
Autism	18414403	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	21858162	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Heart disease	21282601	CNVD
Rubinstein-Taybi syndrome	22470819	CNVD
Alzheimer''s disease	22166940	CNVD
Abnormal phenotypes	18644119	CNVD
Non-syndromic sensorineural hearing loss	22570644	CNVD
Bladder cancer	21909424	CNVD
Cancer	21183584	CNVD
Autism	19492091	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:16066800-16080000	Weak transcription	Right Atrium	heart
2	chr7:16069600-16079200	Weak transcription	Fetal Lung	lung
3	chr7:16074800-16084400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr7:16075000-16080400	Weak transcription	NHLF	lung
5	chr7:16075200-16080000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr7:16075200-16080000	Weak transcription	NHDF-Ad	bronchial
7	chr7:16075400-16080000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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