Variant report

Variant esv3333436
Chromosome Location chr19:41446939-41514952
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:286 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41432200-41447600 Weak transcription Liver Liver
2 chr19:41439200-41447800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr19:41439200-41448000 Weak transcription Stomach Mucosa stomach
4 chr19:41442400-41451400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr19:41442600-41450200 Weak transcription Lung lung
6 chr19:41444800-41455800 Weak transcription Fetal Intestine Large intestine
7 chr19:41445400-41450200 Weak transcription Fetal Intestine Small intestine
8 chr19:41445800-41449200 Enhancers HUVEC blood vessel
9 chr19:41446800-41447200 Enhancers A549 lung
10 chr19:41447200-41447600 Bivalent Enhancer A549 lung
11 chr19:41447400-41448000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr19:41447600-41447800 Flanking Bivalent TSS/Enh A549 lung
13 chr19:41447600-41448200 Strong transcription Liver Liver
14 chr19:41447800-41448200 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr19:41447800-41448200 Bivalent Enhancer A549 lung
16 chr19:41447800-41448200 Bivalent Enhancer K562 blood
17 chr19:41448200-41449600 Weak transcription Liver Liver
18 chr19:41449600-41451800 Strong transcription Liver Liver
19 chr19:41450200-41450400 Bivalent Enhancer Esophagus oesophagus
20 chr19:41450200-41450600 ZNF genes & repeats Lung lung
21 chr19:41450200-41450800 Strong transcription Fetal Intestine Small intestine
22 chr19:41450800-41451800 ZNF genes & repeats Fetal Intestine Small intestine
23 chr19:41451400-41451800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
24 chr19:41451400-41452200 Flanking Active TSS K562 blood
25 chr19:41451800-41452200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr19:41451800-41455200 Weak transcription Liver Liver
27 chr19:41451800-41456200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
28 chr19:41451800-41456200 Weak transcription Fetal Intestine Small intestine
29 chr19:41452200-41452400 Enhancers K562 blood
30 chr19:41453800-41458200 Weak transcription Right Atrium heart
31 chr19:41456200-41456400 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
32 chr19:41459600-41460800 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
33 chr19:41460000-41460800 ZNF genes & repeats Brain Hippocampus Middle brain
34 chr19:41460000-41461600 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr19:41460200-41460400 ZNF genes & repeats A549 lung
36 chr19:41460200-41461400 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
37 chr19:41464600-41464800 Enhancers Fetal Intestine Small intestine
38 chr19:41464800-41466400 Weak transcription Fetal Intestine Small intestine
39 chr19:41465200-41466600 Enhancers Esophagus oesophagus
40 chr19:41465400-41465800 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
41 chr19:41465400-41465800 Active TSS Breast Myoepithelial Primary Cells Breast
42 chr19:41465400-41466000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr19:41465800-41466000 Bivalent Enhancer hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
44 chr19:41465800-41466000 Flanking Bivalent TSS/Enh Brain Dorsolateral Prefrontal Cortex brain
45 chr19:41465800-41466200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr19:41465800-41466200 Flanking Bivalent TSS/Enh ES-UCSF4 Cell Line embryonic stem cell
47 chr19:41465800-41466200 Flanking Bivalent TSS/Enh Breast Myoepithelial Primary Cells Breast
48 chr19:41466000-41466200 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
49 chr19:41466000-41466200 Bivalent Enhancer Adipose Nuclei Adipose
50 chr19:41466000-41466200 Bivalent Enhancer Brain Dorsolateral Prefrontal Cortex brain

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