Variant report

Variant esv3335791
Chromosome Location chr17:16718827-16725925
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:16716600-16723200 Weak transcription Right Atrium heart
2 chr17:16717200-16720000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr17:16717800-16719000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
4 chr17:16718000-16719000 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
5 chr17:16718000-16719000 ZNF genes & repeats Spleen Spleen
6 chr17:16718600-16719200 Enhancers A549 lung
7 chr17:16718600-16720600 Weak transcription Placenta Amnion Placenta Amnion
8 chr17:16719000-16719200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr17:16719000-16719200 Enhancers NHEK skin
10 chr17:16719000-16719400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr17:16719000-16723200 Weak transcription Spleen Spleen
12 chr17:16719000-16724000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr17:16719200-16720600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr17:16719200-16723600 Weak transcription NHEK skin
15 chr17:16719400-16720200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr17:16720200-16722400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
17 chr17:16720600-16722200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr17:16720600-16723000 Strong transcription Placenta Amnion Placenta Amnion
19 chr17:16720600-16723200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr17:16721400-16724600 Enhancers Adipose Nuclei Adipose
21 chr17:16721600-16723800 Weak transcription iPS-15b Cell Line embryonic stem cell
22 chr17:16721800-16722000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr17:16722000-16722600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr17:16722000-16723200 Enhancers Skeletal Muscle Male skeletal muscle
25 chr17:16722000-16724800 Enhancers Right Ventricle heart
26 chr17:16722200-16723000 Bivalent Enhancer Fetal Muscle Leg muscle
27 chr17:16722200-16724200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr17:16722400-16722600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
29 chr17:16722400-16722800 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr17:16722400-16722800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
31 chr17:16722400-16723400 Enhancers Skeletal Muscle Female skeletal muscle
32 chr17:16722600-16723200 Bivalent Enhancer Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr17:16722600-16724400 Enhancers Rectal Smooth Muscle rectum
34 chr17:16722600-16724600 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr17:16722600-16724800 Enhancers Left Ventricle heart
36 chr17:16722800-16723400 Bivalent Enhancer Stomach Smooth Muscle stomach
37 chr17:16722800-16723800 Enhancers HMEC breast
38 chr17:16722800-16724000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
39 chr17:16722800-16725200 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr17:16722800-16725200 Enhancers Esophagus oesophagus
41 chr17:16723000-16723600 Weak transcription Placenta Amnion Placenta Amnion
42 chr17:16723000-16724800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr17:16723000-16724800 Enhancers Fetal Heart heart
44 chr17:16723000-16725200 Enhancers Fetal Muscle Leg muscle
45 chr17:16723200-16723400 Enhancers Spleen Spleen
46 chr17:16723200-16723800 Enhancers Rectal Mucosa Donor 29 rectum
47 chr17:16723200-16724200 Enhancers Rectal Mucosa Donor 31 rectum
48 chr17:16723200-16724200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
49 chr17:16723200-16724400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr17:16723200-16724400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin

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