The 2.0 version of rSNPBase

Variant report

Variant esv3336388
Chromosome Location chr2:48016821-48017274
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:144 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:48011800-48023000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr2:48011800-48026200 Weak transcription Stomach Mucosa stomach
3 chr2:48012000-48017600 Weak transcription Fetal Kidney kidney
4 chr2:48012000-48018000 Weak transcription Psoas Muscle Psoas
5 chr2:48012000-48018400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr2:48012000-48019200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr2:48012000-48022800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr2:48012000-48023000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
9 chr2:48012000-48023400 Weak transcription HSMMtube muscle
10 chr2:48012000-48024400 Weak transcription Placenta Amnion Placenta Amnion
11 chr2:48012000-48024600 Weak transcription Aorta Aorta
12 chr2:48012000-48024600 Weak transcription Rectal Smooth Muscle rectum
13 chr2:48012000-48024800 Weak transcription NHEK skin
14 chr2:48012000-48026000 Weak transcription Esophagus oesophagus
15 chr2:48012000-48026000 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr2:48012000-48026200 Weak transcription Gastric stomach
17 chr2:48012200-48017400 Weak transcription Muscle Satellite Cultured Cells --
18 chr2:48012200-48017400 Weak transcription Thymus Thymus
19 chr2:48012200-48018200 Weak transcription Spleen Spleen
20 chr2:48012200-48019800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr2:48012200-48021200 Weak transcription HMEC breast
22 chr2:48012200-48021600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr2:48012200-48021600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
24 chr2:48012200-48022000 Weak transcription H9 Cell Line embryonic stem cell
25 chr2:48012200-48022200 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr2:48012200-48022200 Weak transcription Osteobl bone
27 chr2:48012200-48023000 Weak transcription NHLF lung
28 chr2:48012200-48023600 Weak transcription Left Ventricle heart
29 chr2:48012200-48024600 Weak transcription Right Ventricle heart
30 chr2:48012200-48026000 Weak transcription Small Intestine intestine
31 chr2:48012200-48030000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr2:48012400-48018000 Weak transcription Brain Germinal Matrix brain
33 chr2:48012400-48018200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr2:48012400-48019400 Weak transcription NH-A brain
35 chr2:48012600-48017200 Weak transcription Fetal Muscle Trunk muscle
36 chr2:48012600-48023000 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr2:48012600-48023800 Weak transcription Colonic Mucosa Colon
38 chr2:48012600-48065000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
39 chr2:48013200-48018200 Weak transcription Adipose Nuclei Adipose
40 chr2:48013200-48021600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr2:48013400-48017000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr2:48013400-48017000 Weak transcription Fetal Intestine Large intestine
43 chr2:48013400-48017200 Weak transcription Pancreas Pancrea
44 chr2:48013400-48017200 Weak transcription HSMM muscle
45 chr2:48013400-48017400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
46 chr2:48013400-48018200 Weak transcription Fetal Brain Female brain
47 chr2:48013400-48018400 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr2:48013400-48018600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr2:48013400-48019400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr2:48013400-48019400 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015