Variant report

Variant	esv3337132
Chromosome Location	chr6:114180309-114182607
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:23)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

No data

(count:23 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:114177680..114181410-chr6:114290377..114292499,3	MCF-7	breast:
2	chr6:114143592..114145943-chr6:114178562..114180507,2	MCF-7	breast:
3	chr6:113109659..113111203-chr6:114178875..114181811,2	MCF-7	breast:
4	chr6:114180592..114182407-chr6:114183261..114185207,2	MCF-7	breast:
5	chr6:113988623..113991575-chr6:114178978..114181550,2	MCF-7	breast:
6	chr6:114179382..114181466-chr6:114226891..114229002,2	MCF-7	breast:
7	chr6:114178671..114180639-chr6:114284210..114286994,2	MCF-7	breast:
8	chr6:113101445..113102356-chr6:114179834..114180665,3	K562	blood:
9	chr17:59488001..59490048-chr6:114178247..114180860,2	MCF-7	breast:
10	chr6:113964552..113967035-chr6:114182588..114184413,2	MCF-7	breast:
11	chr6:114010739..114011539-chr6:114180117..114180628,2	MCF-7	breast:
12	chr6:114178176..114180807-chr6:114192347..114194542,2	MCF-7	breast:
13	chr20:53463274..53464883-chr6:114178881..114181471,2	MCF-7	breast:
14	chr6:113200805..113201509-chr6:114179455..114180713,3	K562	blood:
15	chr6:114179689..114181949-chr6:114200936..114203299,2	K562	blood:
16	chr6:113962572..113972353-chr6:114176344..114182135,15	MCF-7	breast:
17	chr6:113951154..113956306-chr6:114178159..114180970,5	MCF-7	breast:
18	chr6:113443465..113445124-chr6:114178799..114180664,2	MCF-7	breast:
19	chr6:114178559..114181468-chr6:114186800..114188591,2	K562	blood:
20	chr6:113627507..113628019-chr6:114179828..114180698,2	K562	blood:
21	chr6:113970166..113973032-chr6:114177740..114182018,4	MCF-7	breast:
22	chr6:113732055..113735601-chr6:114178607..114183451,4	MCF-7	breast:
23	chr6:113915756..113916633-chr6:114180073..114180718,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MARCKS-7	chr6:114181691-114182980	NONHSAT114573

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	MARCKS	hsa-miR-1	chr6:114181971-114181977

Variant related genes	Relation type
ENSG00000267280	chromatin interactions
ENSG00000230943	chromatin interactions
ENSG00000227502	chromatin interactions
ENSG00000196591	chromatin interactions
ENSG00000187013	chromatin interactions
ENSG00000228624	chromatin interactions

Extended variants
information (count: 87 )
Associated
traits (count: 116 )

Variant overlapped rSNPs/rCNVs (count:87 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs554121224	chr6:114180336-114180337	Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
2	rs566081782	chr6:114180411-114180412	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
3	rs536749561	chr6:114180587-114180588	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
4	rs555054844	chr6:114180589-114180590	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
5	rs573892769	chr6:114180603-114180604	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
6	rs45622343	chr6:114180606-114180607	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
7	rs374005986	chr6:114180615-114180616	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
8	rs577849143	chr6:114180635-114180636	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
9	rs352082	chr6:114180646-114180647	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs45622441	chr6:114180652-114180653	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs3734457	chr6:114180671-114180672	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
12	rs542322096	chr6:114180676-114180677	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
13	rs368615460	chr6:114180766-114180767	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
14	rs368658348	chr6:114180770-114180771	Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	6 gene(s)	Overlapped CNVs	n/a
15	rs547238463	chr6:114180811-114180812	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
16	rs560614131	chr6:114180851-114180852	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	5 gene(s)	Overlapped CNVs	n/a
17	rs531808007	chr6:114180920-114180921	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs549939916	chr6:114180924-114180925	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs565272007	chr6:114180959-114180960	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs532832793	chr6:114181087-114181088	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs547521790	chr6:114181089-114181090	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs111973404	chr6:114181122-114181123	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs566068601	chr6:114181127-114181128	Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs567025772	chr6:114181275-114181276	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs539350596	chr6:114181278-114181279	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs548717045	chr6:114181309-114181310	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs45535333	chr6:114181329-114181330	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
28	rs374780311	chr6:114181358-114181359	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
29	rs189092612	chr6:114181437-114181438	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs1049561	chr6:114181456-114181457	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs45593337	chr6:114181505-114181506	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs13210092	chr6:114181525-114181526	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs13210099	chr6:114181552-114181553	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs3734458	chr6:114181577-114181578	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Genic enhancers Enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs538925937	chr6:114181606-114181607	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs553740716	chr6:114181629-114181630	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs572021544	chr6:114181657-114181658	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs369178638	chr6:114181692-114181693	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
39	rs144135156	chr6:114181694-114181695	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
40	rs147240197	chr6:114181711-114181712	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
41	rs560738308	chr6:114181725-114181726	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
42	rs149796810	chr6:114181731-114181732	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
43	rs144738162	chr6:114181735-114181736	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
44	rs200886882	chr6:114181740-114181741	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
45	rs182598859	chr6:114181763-114181764	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
46	rs565228199	chr6:114181784-114181785	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
47	rs548079843	chr6:114181793-114181794	Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
48	rs559763616	chr6:114181823-114181824	Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
49	rs530132101	chr6:114181873-114181874	Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a
50	rs45449896	chr6:114181915-114181916	Active TSS Strong transcription Weak transcription Transcr. at gene 5' and 3' Genic enhancers Enhancers Flanking Active TSS	Chromatin interactive region lncRNA	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:116)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Melanoma	18172304	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Breast cancer	16272173	CNVD
Prostate cancer	18632612	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
Lung adenocarcinoma	21935476	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	17603634	CNVD
Chondromyxoid Fibroma	20696777	CNVD
Cancer	21183584	CNVD
Developmental delay	19490664	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Burkitt''s lymphoma	18698080	CNVD
Ovarian cancer	21720365	CNVD
Basal cell lymphoma	17170743	CNVD
Prostate cancer	16573809	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Breast cancer	21785460	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16461572	CNVD
Neurocytoma	17123091	CNVD
Cancer	20164920	CNVD
Breast cancer	21364760	CNVD
Chordoma	21602918	CNVD
Kartagener syndrome	16639409	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Systemic lupus erythematosus	19220326	CNVD
Cancer	17160897	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Acute lymphoblastic leukemia	17229543	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17133270	CNVD
Follicular lymphoma	18703704	CNVD
Mental retardation	17621639	CNVD
Hypoplastic	20877625	CNVD
Hypotonia	20877625	CNVD
Mental retardation	20877625	CNVD
Microcephaly	20877625	CNVD
brachycephaly	20877625	CNVD
epicanthic folds	20877625	CNVD
micrognathia	20877625	CNVD
small cell lung cancer	20016488	CNVD
Urothelial carcinoma	21177765	CNVD
Breast cancer	21804112	CNVD
Myelofibrosis	22110671	CNVD
Neurodevelopmental disorder	22521361	CNVD

Chromatin state (count:333 , 50 per page) page: 1 2 3 4 5 6 7

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:114175400-114180400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr6:114175400-114182200	Active TSS	A549	lung
3	chr6:114175600-114181400	Active TSS	NHLF	lung
4	chr6:114175600-114181800	Active TSS	Brain Inferior Temporal Lobe	brain
5	chr6:114175600-114181800	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr6:114175600-114181800	Active TSS	Fetal Lung	lung
7	chr6:114175600-114181800	Active TSS	NHDF-Ad	bronchial
8	chr6:114175600-114182000	Active TSS	Brain Anterior Caudate	brain
9	chr6:114175600-114182000	Active TSS	Brain Hippocampus Middle	brain
10	chr6:114175600-114182200	Active TSS	Brain Substantia Nigra	brain
11	chr6:114175600-114183000	Active TSS	Duodenum Smooth Muscle	Duodenum
12	chr6:114175600-114183600	Active TSS	Right Atrium	heart
13	chr6:114175600-114184000	Active TSS	Breast Myoepithelial Primary Cells	Breast
14	chr6:114175800-114180400	Active TSS	Colonic Mucosa	Colon
15	chr6:114175800-114180400	Active TSS	Right Ventricle	heart
16	chr6:114175800-114180400	Active TSS	Skeletal Muscle Male	skeletal muscle
17	chr6:114175800-114180600	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr6:114175800-114180800	Active TSS	Fetal Kidney	kidney
19	chr6:114175800-114181800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr6:114175800-114181800	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
21	chr6:114175800-114181800	Active TSS	Brain Angular Gyrus	brain
22	chr6:114175800-114181800	Active TSS	Esophagus	oesophagus
23	chr6:114175800-114181800	Active TSS	Gastric	stomach
24	chr6:114175800-114181800	Active TSS	Pancreas	Pancrea
25	chr6:114175800-114181800	Active TSS	Sigmoid Colon	Sigmoid Colon
26	chr6:114175800-114182000	Active TSS	Aorta	Aorta
27	chr6:114175800-114182000	Active TSS	Fetal Intestine Small	intestine
28	chr6:114175800-114182200	Active TSS	Brain Cingulate Gyrus	brain
29	chr6:114175800-114182200	Active TSS	Ovary	ovary
30	chr6:114175800-114182600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
31	chr6:114175800-114182800	Active TSS	Psoas Muscle	Psoas
32	chr6:114176000-114180400	Active TSS	Left Ventricle	heart
33	chr6:114176000-114181000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
34	chr6:114176000-114182400	Active TSS	Fetal Intestine Large	intestine
35	chr6:114176000-114183200	Active TSS	Colon Smooth Muscle	Colon
36	chr6:114176200-114180600	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr6:114176200-114181800	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr6:114176200-114182200	Active TSS	Fetal Muscle Trunk	muscle
39	chr6:114177000-114182200	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
40	chr6:114177200-114180400	Active TSS	Placenta	Placenta
41	chr6:114177200-114180400	Active TSS	Fetal Stomach	stomach
42	chr6:114177200-114180600	Flanking Bivalent TSS/Enh	Primary T helper cells PMA-I stimulated	--
43	chr6:114177200-114180800	ZNF genes & repeats	Fetal Brain Male	brain
44	chr6:114177200-114181200	Active TSS	Placenta Amnion	Placenta Amnion
45	chr6:114177400-114180400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
46	chr6:114177400-114180400	Active TSS	Duodenum Mucosa	Duodenum
47	chr6:114177400-114180400	Active TSS	Rectal Mucosa Donor 29	rectum
48	chr6:114177400-114180800	Flanking Active TSS	Liver	Liver
49	chr6:114177400-114181000	Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
50	chr6:114177400-114182200	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links